EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011171 (Gene tree)
Gene ID: 102217081
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3640 bases
Position: chr7:10768636-10772275
Accession: 102217081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000011193	MMR_HSR1	PF01926.23	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011207	-	2654	XM_005798095	ENSXMAP00000011193	234 (aa)	XP_005798152	M4A9P9

Gene Model

Click here to download ENSXMAG00000011171's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011171	zgc:101559	100	84.615	ENSAPOG00000007503	zgc:101559	100	84.615	Acanthochromis_polyacanthus
ENSXMAG00000011171	zgc:101559	90	87.143	ENSACIG00000021459	zgc:101559	92	87.143	Amphilophus_citrinellus
ENSXMAG00000011171	zgc:101559	100	84.615	ENSAOCG00000024675	zgc:101559	100	84.615	Amphiprion_ocellaris
ENSXMAG00000011171	zgc:101559	100	84.615	ENSAPEG00000005176	zgc:101559	100	84.615	Amphiprion_percula
ENSXMAG00000011171	zgc:101559	100	83.333	ENSATEG00000007761	zgc:101559	100	83.333	Anabas_testudineus
ENSXMAG00000011171	zgc:101559	99	84.549	ENSACLG00000027006	zgc:101559	99	84.549	Astatotilapia_calliptera
ENSXMAG00000011171	zgc:101559	99	74.569	ENSAMXG00000040460	zgc:101559	94	74.569	Astyanax_mexicanus
ENSXMAG00000011171	zgc:101559	100	78.205	ENSCSEG00000006243	zgc:101559	100	78.205	Cynoglossus_semilaevis
ENSXMAG00000011171	zgc:101559	100	93.162	ENSCVAG00000019227	zgc:101559	100	93.162	Cyprinodon_variegatus
ENSXMAG00000011171	zgc:101559	100	73.191	ENSDARG00000003257	zgc:101559	100	73.191	Danio_rerio
ENSXMAG00000011171	zgc:101559	100	91.026	ENSFHEG00000011483	zgc:101559	100	91.026	Fundulus_heteroclitus
ENSXMAG00000011171	zgc:101559	91	81.132	ENSGMOG00000011665	zgc:101559	99	81.132	Gadus_morhua
ENSXMAG00000011171	zgc:101559	100	96.154	ENSGAFG00000021202	zgc:101559	100	96.154	Gambusia_affinis
ENSXMAG00000011171	zgc:101559	91	81.132	ENSGACG00000001725	zgc:101559	91	81.132	Gasterosteus_aculeatus
ENSXMAG00000011171	zgc:101559	100	84.615	ENSHBUG00000007827	zgc:101559	100	84.615	Haplochromis_burtoni
ENSXMAG00000011171	zgc:101559	100	74.576	ENSHCOG00000009133	zgc:101559	100	76.891	Hippocampus_comes
ENSXMAG00000011171	zgc:101559	92	73.148	ENSIPUG00000022394	zgc:101559	93	73.148	Ictalurus_punctatus
ENSXMAG00000011171	zgc:101559	100	83.830	ENSKMAG00000002862	zgc:101559	100	83.830	Kryptolebias_marmoratus
ENSXMAG00000011171	zgc:101559	100	83.761	ENSLBEG00000025798	zgc:101559	100	83.761	Labrus_bergylta
ENSXMAG00000011171	zgc:101559	86	66.169	ENSLACG00000011557	zgc:101559	87	66.169	Latimeria_chalumnae
ENSXMAG00000011171	zgc:101559	100	69.658	ENSLOCG00000005904	zgc:101559	99	69.658	Lepisosteus_oculatus
ENSXMAG00000011171	zgc:101559	100	82.906	ENSMAMG00000017431	zgc:101559	100	82.906	Mastacembelus_armatus
ENSXMAG00000011171	zgc:101559	100	84.615	ENSMZEG00005021778	zgc:101559	100	84.615	Maylandia_zebra
ENSXMAG00000011171	zgc:101559	100	80.769	ENSMMOG00000019779	zgc:101559	100	80.769	Mola_mola
ENSXMAG00000011171	zgc:101559	100	80.769	ENSMALG00000003712	zgc:101559	100	80.769	Monopterus_albus
ENSXMAG00000011171	zgc:101559	100	83.761	ENSNBRG00000002684	zgc:101559	100	83.761	Neolamprologus_brichardi
ENSXMAG00000011171	zgc:101559	100	84.615	ENSONIG00000006715	-	100	84.615	Oreochromis_niloticus
ENSXMAG00000011171	zgc:101559	100	84.188	ENSORLG00000030642	zgc:101559	100	84.188	Oryzias_latipes
ENSXMAG00000011171	zgc:101559	100	83.333	ENSORLG00020012685	zgc:101559	100	83.333	Oryzias_latipes_hni
ENSXMAG00000011171	zgc:101559	100	83.761	ENSORLG00015016047	zgc:101559	100	83.761	Oryzias_latipes_hsok
ENSXMAG00000011171	zgc:101559	100	85.470	ENSOMEG00000013128	zgc:101559	100	85.470	Oryzias_melastigma
ENSXMAG00000011171	zgc:101559	86	75.743	ENSPKIG00000013397	zgc:101559	85	75.743	Paramormyrops_kingsleyae
ENSXMAG00000011171	zgc:101559	100	96.154	ENSPFOG00000009101	-	100	96.154	Poecilia_formosa
ENSXMAG00000011171	zgc:101559	100	95.726	ENSPLAG00000020627	zgc:101559	100	95.726	Poecilia_latipinna
ENSXMAG00000011171	zgc:101559	100	96.581	ENSPMEG00000010152	zgc:101559	100	96.581	Poecilia_mexicana
ENSXMAG00000011171	zgc:101559	100	96.581	ENSPREG00000007017	zgc:101559	100	96.581	Poecilia_reticulata
ENSXMAG00000011171	zgc:101559	100	84.615	ENSPNYG00000012922	zgc:101559	100	84.615	Pundamilia_nyererei
ENSXMAG00000011171	zgc:101559	99	74.249	ENSPNAG00000017856	zgc:101559	100	74.249	Pygocentrus_nattereri
ENSXMAG00000011171	zgc:101559	97	70.485	ENSSFOG00015006175	zgc:101559	97	70.485	Scleropages_formosus
ENSXMAG00000011171	zgc:101559	99	81.974	ENSSMAG00000002229	zgc:101559	99	81.974	Scophthalmus_maximus
ENSXMAG00000011171	zgc:101559	100	86.752	ENSSDUG00000008151	zgc:101559	100	86.752	Seriola_dumerili
ENSXMAG00000011171	zgc:101559	100	86.752	ENSSLDG00000019214	zgc:101559	100	86.752	Seriola_lalandi_dorsalis
ENSXMAG00000011171	zgc:101559	100	85.470	ENSSPAG00000006404	zgc:101559	100	85.470	Stegastes_partitus
ENSXMAG00000011171	zgc:101559	100	80.342	ENSTRUG00000009903	zgc:101559	100	80.342	Takifugu_rubripes
ENSXMAG00000011171	zgc:101559	93	79.817	ENSTNIG00000015000	zgc:101559	93	79.452	Tetraodon_nigroviridis
ENSXMAG00000011171	zgc:101559	100	99.145	ENSXCOG00000018683	zgc:101559	100	99.145	Xiphophorus_couchianus