EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011246 (Gene tree)
Gene ID: 102225741
Gene Symbol: exosc10
Alias: zgc:55695
Full Name: exosome component 10
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11580 bases
Position: chr1:12214417-12225996
Accession: 102225741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039933	HRDC	PF00570.23	1.2e-11	1	1
ENSXMAP00000011290	HRDC	PF00570.23	1.3e-11	1	1
ENSXMAP00000039933	PMC2NT	PF08066.12	1.3e-23	1	1
ENSXMAP00000011290	PMC2NT	PF08066.12	1.7e-23	1	1
ENSXMAP00000039933	DNA_pol_A_exo1	PF01612.20	3.2e-47	1	1
ENSXMAP00000011290	DNA_pol_A_exo1	PF01612.20	3.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000032101	-	2418	-	ENSXMAP00000039933	805 (aa)	-	-
ENSXMAT00000011304	-	2782	XM_005808202	ENSXMAP00000011290	891 (aa)	XP_005808259	M4A9Z6

Gene Model

Click here to download ENSXMAG00000011246's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011246	exosc10	97	61.975	ENSG00000171824	EXOSC10	97	62.100	Homo_sapiens
ENSXMAG00000011246	exosc10	99	83.632	ENSAPOG00000013304	exosc10	100	83.632	Acanthochromis_polyacanthus
ENSXMAG00000011246	exosc10	97	62.671	ENSAMEG00000009546	EXOSC10	97	62.671	Ailuropoda_melanoleuca
ENSXMAG00000011246	exosc10	95	76.704	ENSACIG00000020455	exosc10	97	76.704	Amphilophus_citrinellus
ENSXMAG00000011246	exosc10	99	80.676	ENSAOCG00000018823	exosc10	100	80.676	Amphiprion_ocellaris
ENSXMAG00000011246	exosc10	99	82.735	ENSAPEG00000017786	exosc10	99	82.735	Amphiprion_percula
ENSXMAG00000011246	exosc10	99	83.408	ENSATEG00000017271	exosc10	100	83.408	Anabas_testudineus
ENSXMAG00000011246	exosc10	96	62.356	ENSAPLG00000006652	EXOSC10	98	61.982	Anas_platyrhynchos
ENSXMAG00000011246	exosc10	95	59.674	ENSANAG00000031112	EXOSC10	99	59.207	Aotus_nancymaae
ENSXMAG00000011246	exosc10	98	83.010	ENSACLG00000025226	exosc10	100	82.419	Astatotilapia_calliptera
ENSXMAG00000011246	exosc10	99	72.800	ENSAMXG00000014510	exosc10	100	65.862	Astyanax_mexicanus
ENSXMAG00000011246	exosc10	75	66.959	ENSBTAG00000002590	EXOSC10	96	66.959	Bos_taurus
ENSXMAG00000011246	exosc10	68	36.991	WBGene00000796	crn-3	63	36.538	Caenorhabditis_elegans
ENSXMAG00000011246	exosc10	98	61.382	ENSCJAG00000002327	EXOSC10	98	60.929	Callithrix_jacchus
ENSXMAG00000011246	exosc10	97	62.743	ENSCAFG00000016721	EXOSC10	95	62.743	Canis_familiaris
ENSXMAG00000011246	exosc10	97	62.743	ENSCAFG00020002481	EXOSC10	95	62.743	Canis_lupus_dingo
ENSXMAG00000011246	exosc10	97	60.701	ENSCHIG00000020022	EXOSC10	97	60.459	Capra_hircus
ENSXMAG00000011246	exosc10	97	58.629	ENSTSYG00000006937	EXOSC10	97	58.153	Carlito_syrichta
ENSXMAG00000011246	exosc10	96	61.298	ENSCAPG00000006494	EXOSC10	99	61.130	Cavia_aperea
ENSXMAG00000011246	exosc10	98	61.130	ENSCPOG00000011628	EXOSC10	97	60.992	Cavia_porcellus
ENSXMAG00000011246	exosc10	99	58.231	ENSCCAG00000023223	EXOSC10	100	61.397	Cebus_capucinus
ENSXMAG00000011246	exosc10	100	60.793	ENSCATG00000039000	EXOSC10	93	68.006	Cercocebus_atys
ENSXMAG00000011246	exosc10	98	60.609	ENSCLAG00000005283	EXOSC10	98	60.360	Chinchilla_lanigera
ENSXMAG00000011246	exosc10	100	60.573	ENSCSAG00000000788	EXOSC10	99	61.229	Chlorocebus_sabaeus
ENSXMAG00000011246	exosc10	84	64.776	ENSCHOG00000012713	EXOSC10	85	64.644	Choloepus_hoffmanni
ENSXMAG00000011246	exosc10	97	63.086	ENSCPBG00000022004	EXOSC10	96	62.828	Chrysemys_picta_bellii
ENSXMAG00000011246	exosc10	68	49.110	ENSCSAVG00000009049	-	97	48.034	Ciona_savignyi
ENSXMAG00000011246	exosc10	97	61.591	ENSCANG00000042813	EXOSC10	97	61.714	Colobus_angolensis_palliatus
ENSXMAG00000011246	exosc10	98	61.287	ENSCGRG00001018469	Exosc10	98	60.722	Cricetulus_griseus_chok1gshd
ENSXMAG00000011246	exosc10	98	61.061	ENSCGRG00000002278	Exosc10	98	60.497	Cricetulus_griseus_crigri
ENSXMAG00000011246	exosc10	100	79.036	ENSCSEG00000005346	exosc10	99	79.036	Cynoglossus_semilaevis
ENSXMAG00000011246	exosc10	99	90.112	ENSCVAG00000016429	exosc10	100	90.000	Cyprinodon_variegatus
ENSXMAG00000011246	exosc10	97	67.800	ENSDARG00000037708	exosc10	99	67.255	Danio_rerio
ENSXMAG00000011246	exosc10	97	61.320	ENSDNOG00000011301	EXOSC10	98	61.206	Dasypus_novemcinctus
ENSXMAG00000011246	exosc10	97	58.257	ENSDORG00000003769	Exosc10	97	58.142	Dipodomys_ordii
ENSXMAG00000011246	exosc10	74	39.683	FBgn0038269	Rrp6	72	39.683	Drosophila_melanogaster
ENSXMAG00000011246	exosc10	92	60.911	ENSETEG00000000830	EXOSC10	97	60.599	Echinops_telfairi
ENSXMAG00000011246	exosc10	72	36.107	ENSEBUG00000004395	exosc10	99	37.684	Eptatretus_burgeri
ENSXMAG00000011246	exosc10	92	72.679	ENSEASG00005018716	EXOSC10	97	72.679	Equus_asinus_asinus
ENSXMAG00000011246	exosc10	97	62.629	ENSECAG00000011639	EXOSC10	97	62.629	Equus_caballus
ENSXMAG00000011246	exosc10	70	64.384	ENSEEUG00000001166	EXOSC10	72	62.880	Erinaceus_europaeus
ENSXMAG00000011246	exosc10	98	73.858	ENSELUG00000012870	exosc10	98	73.625	Esox_lucius
ENSXMAG00000011246	exosc10	97	61.627	ENSFCAG00000000052	EXOSC10	97	61.627	Felis_catus
ENSXMAG00000011246	exosc10	97	60.613	ENSFALG00000010287	EXOSC10	96	60.499	Ficedula_albicollis
ENSXMAG00000011246	exosc10	98	60.791	ENSFDAG00000002942	EXOSC10	98	60.722	Fukomys_damarensis
ENSXMAG00000011246	exosc10	99	89.113	ENSFHEG00000010678	exosc10	100	89.113	Fundulus_heteroclitus
ENSXMAG00000011246	exosc10	84	76.895	ENSGMOG00000006131	exosc10	90	76.340	Gadus_morhua
ENSXMAG00000011246	exosc10	99	60.758	ENSGALG00000003086	EXOSC10	97	60.178	Gallus_gallus
ENSXMAG00000011246	exosc10	99	96.602	ENSGAFG00000019222	exosc10	100	96.602	Gambusia_affinis
ENSXMAG00000011246	exosc10	99	75.673	ENSGACG00000007037	exosc10	100	75.364	Gasterosteus_aculeatus
ENSXMAG00000011246	exosc10	99	60.643	ENSGAGG00000000251	EXOSC10	100	61.247	Gopherus_agassizii
ENSXMAG00000011246	exosc10	97	61.975	ENSGGOG00000010572	EXOSC10	97	62.100	Gorilla_gorilla
ENSXMAG00000011246	exosc10	98	74.635	ENSHBUG00000020328	exosc10	100	74.172	Haplochromis_burtoni
ENSXMAG00000011246	exosc10	98	61.243	ENSHGLG00000011944	EXOSC10	98	61.061	Heterocephalus_glaber_female
ENSXMAG00000011246	exosc10	98	61.243	ENSHGLG00100014444	EXOSC10	98	61.061	Heterocephalus_glaber_male
ENSXMAG00000011246	exosc10	100	75.364	ENSHCOG00000016164	exosc10	100	75.812	Hippocampus_comes
ENSXMAG00000011246	exosc10	99	67.778	ENSIPUG00000021971	exosc10	99	67.667	Ictalurus_punctatus
ENSXMAG00000011246	exosc10	100	60.576	ENSSTOG00000005459	EXOSC10	100	60.331	Ictidomys_tridecemlineatus
ENSXMAG00000011246	exosc10	99	60.421	ENSJJAG00000013716	Exosc10	100	60.177	Jaculus_jaculus
ENSXMAG00000011246	exosc10	99	84.305	ENSKMAG00000015540	exosc10	100	84.305	Kryptolebias_marmoratus
ENSXMAG00000011246	exosc10	100	82.419	ENSLBEG00000022229	exosc10	100	82.419	Labrus_bergylta
ENSXMAG00000011246	exosc10	97	62.942	ENSLACG00000016691	EXOSC10	97	63.170	Latimeria_chalumnae
ENSXMAG00000011246	exosc10	98	69.353	ENSLOCG00000006443	exosc10	98	69.353	Lepisosteus_oculatus
ENSXMAG00000011246	exosc10	98	61.738	ENSLAFG00000016894	EXOSC10	98	61.738	Loxodonta_africana
ENSXMAG00000011246	exosc10	100	60.683	ENSMFAG00000038874	EXOSC10	100	59.403	Macaca_fascicularis
ENSXMAG00000011246	exosc10	100	60.683	ENSMMUG00000019322	EXOSC10	100	60.797	Macaca_mulatta
ENSXMAG00000011246	exosc10	100	60.683	ENSMNEG00000035812	EXOSC10	100	60.797	Macaca_nemestrina
ENSXMAG00000011246	exosc10	100	60.793	ENSMLEG00000025160	EXOSC10	100	60.908	Mandrillus_leucophaeus
ENSXMAG00000011246	exosc10	99	80.430	ENSMAMG00000019375	exosc10	100	80.317	Mastacembelus_armatus
ENSXMAG00000011246	exosc10	98	83.010	ENSMZEG00005013730	exosc10	100	82.419	Maylandia_zebra
ENSXMAG00000011246	exosc10	96	61.105	ENSMGAG00000004665	EXOSC10	99	60.620	Meleagris_gallopavo
ENSXMAG00000011246	exosc10	70	71.150	ENSMAUG00000019261	Exosc10	97	69.064	Mesocricetus_auratus
ENSXMAG00000011246	exosc10	97	62.471	ENSMICG00000003858	EXOSC10	97	62.329	Microcebus_murinus
ENSXMAG00000011246	exosc10	72	69.640	ENSMOCG00000016509	Exosc10	93	70.681	Microtus_ochrogaster
ENSXMAG00000011246	exosc10	99	79.048	ENSMMOG00000009265	exosc10	100	79.048	Mola_mola
ENSXMAG00000011246	exosc10	97	60.845	ENSMODG00000011194	EXOSC10	97	61.276	Monodelphis_domestica
ENSXMAG00000011246	exosc10	99	80.403	ENSMALG00000021322	exosc10	100	80.403	Monopterus_albus
ENSXMAG00000011246	exosc10	100	60.066	MGP_CAROLIEiJ_G0026802	Exosc10	99	66.720	Mus_caroli
ENSXMAG00000011246	exosc10	100	59.624	ENSMUSG00000017264	Exosc10	99	66.559	Mus_musculus
ENSXMAG00000011246	exosc10	100	60.398	MGP_PahariEiJ_G0029150	Exosc10	96	68.509	Mus_pahari
ENSXMAG00000011246	exosc10	100	59.735	MGP_SPRETEiJ_G0027795	Exosc10	99	66.559	Mus_spretus
ENSXMAG00000011246	exosc10	98	61.905	ENSMPUG00000016434	EXOSC10	96	61.565	Mustela_putorius_furo
ENSXMAG00000011246	exosc10	98	61.685	ENSMLUG00000004276	EXOSC10	98	62.104	Myotis_lucifugus
ENSXMAG00000011246	exosc10	97	61.714	ENSNGAG00000023829	Exosc10	97	61.600	Nannospalax_galili
ENSXMAG00000011246	exosc10	98	81.885	ENSNBRG00000006256	exosc10	100	81.423	Neolamprologus_brichardi
ENSXMAG00000011246	exosc10	96	61.697	ENSNLEG00000009539	EXOSC10	96	62.168	Nomascus_leucogenys
ENSXMAG00000011246	exosc10	65	89.189	ENSMEUG00000007020	-	64	89.189	Notamacropus_eugenii
ENSXMAG00000011246	exosc10	97	62.202	ENSOPRG00000012091	EXOSC10	98	61.765	Ochotona_princeps
ENSXMAG00000011246	exosc10	98	60.791	ENSODEG00000013285	EXOSC10	98	60.722	Octodon_degus
ENSXMAG00000011246	exosc10	87	84.794	ENSONIG00000002322	exosc10	99	84.794	Oreochromis_niloticus
ENSXMAG00000011246	exosc10	98	58.810	ENSOANG00000013322	EXOSC10	98	58.698	Ornithorhynchus_anatinus
ENSXMAG00000011246	exosc10	98	61.547	ENSOCUG00000013039	EXOSC10	99	61.469	Oryctolagus_cuniculus
ENSXMAG00000011246	exosc10	99	80.830	ENSORLG00000005117	exosc10	100	83.106	Oryzias_latipes
ENSXMAG00000011246	exosc10	99	81.502	ENSORLG00020013529	exosc10	100	81.614	Oryzias_latipes_hni
ENSXMAG00000011246	exosc10	99	81.502	ENSORLG00015005525	exosc10	100	81.502	Oryzias_latipes_hsok
ENSXMAG00000011246	exosc10	99	80.605	ENSOMEG00000003337	exosc10	100	80.605	Oryzias_melastigma
ENSXMAG00000011246	exosc10	97	57.013	ENSOGAG00000013662	EXOSC10	97	57.224	Otolemur_garnettii
ENSXMAG00000011246	exosc10	97	61.433	ENSOARG00000003668	EXOSC10	97	61.477	Ovis_aries
ENSXMAG00000011246	exosc10	97	61.851	ENSPPAG00000038356	EXOSC10	97	62.443	Pan_paniscus
ENSXMAG00000011246	exosc10	97	61.741	ENSPPRG00000022976	EXOSC10	97	61.741	Panthera_pardus
ENSXMAG00000011246	exosc10	92	62.214	ENSPTIG00000012735	EXOSC10	96	61.733	Panthera_tigris_altaica
ENSXMAG00000011246	exosc10	97	59.272	ENSPTRG00000000140	EXOSC10	97	59.268	Pan_troglodytes
ENSXMAG00000011246	exosc10	100	60.022	ENSPANG00000026088	EXOSC10	100	60.133	Papio_anubis
ENSXMAG00000011246	exosc10	100	66.741	ENSPKIG00000013098	exosc10	98	66.741	Paramormyrops_kingsleyae
ENSXMAG00000011246	exosc10	99	59.513	ENSPSIG00000005078	EXOSC10	99	59.382	Pelodiscus_sinensis
ENSXMAG00000011246	exosc10	72	83.882	ENSPMGG00000022241	exosc10	99	83.333	Periophthalmus_magnuspinnatus
ENSXMAG00000011246	exosc10	77	66.857	ENSPEMG00000007753	Exosc10	97	66.714	Peromyscus_maniculatus_bairdii
ENSXMAG00000011246	exosc10	61	52.429	ENSPMAG00000006909	exosc10	100	52.227	Petromyzon_marinus
ENSXMAG00000011246	exosc10	96	56.495	ENSPCIG00000004840	EXOSC10	94	69.707	Phascolarctos_cinereus
ENSXMAG00000011246	exosc10	100	94.731	ENSPFOG00000004744	exosc10	100	94.731	Poecilia_formosa
ENSXMAG00000011246	exosc10	100	94.731	ENSPLAG00000010253	exosc10	100	94.731	Poecilia_latipinna
ENSXMAG00000011246	exosc10	100	94.507	ENSPMEG00000005740	exosc10	100	94.507	Poecilia_mexicana
ENSXMAG00000011246	exosc10	100	94.170	ENSPREG00000016285	exosc10	100	94.170	Poecilia_reticulata
ENSXMAG00000011246	exosc10	97	61.582	ENSPPYG00000001891	EXOSC10	95	61.705	Pongo_abelii
ENSXMAG00000011246	exosc10	83	62.981	ENSPCAG00000001583	EXOSC10	93	62.981	Procavia_capensis
ENSXMAG00000011246	exosc10	97	62.199	ENSPCOG00000013742	EXOSC10	97	62.057	Propithecus_coquereli
ENSXMAG00000011246	exosc10	98	62.061	ENSPVAG00000014780	EXOSC10	98	62.061	Pteropus_vampyrus
ENSXMAG00000011246	exosc10	98	83.124	ENSPNYG00000007387	exosc10	100	82.531	Pundamilia_nyererei
ENSXMAG00000011246	exosc10	98	67.037	ENSPNAG00000028864	exosc10	100	65.976	Pygocentrus_nattereri
ENSXMAG00000011246	exosc10	97	61.600	ENSRNOG00000010719	Exosc10	97	61.486	Rattus_norvegicus
ENSXMAG00000011246	exosc10	97	55.556	ENSRBIG00000039772	EXOSC10	97	55.263	Rhinopithecus_bieti
ENSXMAG00000011246	exosc10	97	62.243	ENSRROG00000036700	EXOSC10	97	61.943	Rhinopithecus_roxellana
ENSXMAG00000011246	exosc10	66	37.205	YOR001W	-	68	36.661	Saccharomyces_cerevisiae
ENSXMAG00000011246	exosc10	97	56.686	ENSSBOG00000020768	EXOSC10	99	56.343	Saimiri_boliviensis_boliviensis
ENSXMAG00000011246	exosc10	96	59.444	ENSSHAG00000013572	EXOSC10	100	59.907	Sarcophilus_harrisii
ENSXMAG00000011246	exosc10	95	67.878	ENSSFOG00015004512	exosc10	98	67.761	Scleropages_formosus
ENSXMAG00000011246	exosc10	98	81.537	ENSSMAG00000017318	exosc10	100	79.978	Scophthalmus_maximus
ENSXMAG00000011246	exosc10	99	83.408	ENSSDUG00000006646	exosc10	100	83.408	Seriola_dumerili
ENSXMAG00000011246	exosc10	99	83.184	ENSSLDG00000025554	exosc10	100	83.184	Seriola_lalandi_dorsalis
ENSXMAG00000011246	exosc10	77	52.045	ENSSARG00000013171	EXOSC10	99	50.200	Sorex_araneus
ENSXMAG00000011246	exosc10	95	61.485	ENSSPUG00000006844	EXOSC10	95	72.007	Sphenodon_punctatus
ENSXMAG00000011246	exosc10	99	83.072	ENSSPAG00000007053	exosc10	100	83.072	Stegastes_partitus
ENSXMAG00000011246	exosc10	90	61.444	ENSSSCG00000003412	EXOSC10	100	61.369	Sus_scrofa
ENSXMAG00000011246	exosc10	96	59.861	ENSTGUG00000002231	EXOSC10	99	59.444	Taeniopygia_guttata
ENSXMAG00000011246	exosc10	99	75.082	ENSTRUG00000012484	exosc10	98	75.278	Takifugu_rubripes
ENSXMAG00000011246	exosc10	97	78.802	ENSTNIG00000015181	exosc10	99	78.802	Tetraodon_nigroviridis
ENSXMAG00000011246	exosc10	69	72.180	ENSTBEG00000017471	-	69	72.180	Tupaia_belangeri
ENSXMAG00000011246	exosc10	97	61.818	ENSTTRG00000001320	EXOSC10	97	61.678	Tursiops_truncatus
ENSXMAG00000011246	exosc10	93	62.217	ENSUAMG00000014404	EXOSC10	96	62.217	Ursus_americanus
ENSXMAG00000011246	exosc10	97	60.710	ENSUMAG00000023413	EXOSC10	99	65.043	Ursus_maritimus
ENSXMAG00000011246	exosc10	67	72.894	ENSVPAG00000004629	EXOSC10	62	72.894	Vicugna_pacos
ENSXMAG00000011246	exosc10	90	61.765	ENSVVUG00000027116	EXOSC10	100	61.765	Vulpes_vulpes
ENSXMAG00000011246	exosc10	97	55.719	ENSXETG00000006318	exosc10	99	55.329	Xenopus_tropicalis
ENSXMAG00000011246	exosc10	99	98.652	ENSXCOG00000004665	exosc10	100	98.652	Xiphophorus_couchianus