EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000011405 (Gene tree)
Gene ID
102236851
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
20629 bases
Position
chr7:17978572-17999200
Accession
102236851
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000011444RRM_1PF00076.221.9e-3112
ENSXMAP00000011444RRM_1PF00076.221.9e-3122
ENSXMAP00000031550RRM_1PF00076.222.5e-3112
ENSXMAP00000031550RRM_1PF00076.222.5e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000011458RBMS1 (1 of many)-2021083-ENSXMAP00000011444360 (aa)-M4AAF0
ENSXMAT00000033766RBMS1 (1 of many)-2014181XM_005805339ENSXMAP00000031550393 (aa)XP_005805396UPI000293992B
Gene Model
Click here to download ENSXMAG00000011405's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011405's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000011405RBMS19475.798ENSG00000153250RBMS18392.453Homo_sapiens
ENSXMAG00000011405RBMS110087.626ENSAPOG00000024437-10085.606Acanthochromis_polyacanthus
ENSXMAG00000011405RBMS19967.519ENSAPOG00000013761rbms1a9967.008Acanthochromis_polyacanthus
ENSXMAG00000011405RBMS19473.947ENSAMEG00000012661RBMS19873.947Ailuropoda_melanoleuca
ENSXMAG00000011405RBMS19885.492ENSACIG00000021498RBMS19785.492Amphilophus_citrinellus
ENSXMAG00000011405RBMS19959.847ENSACIG00000000113rbms1a9960.358Amphilophus_citrinellus
ENSXMAG00000011405RBMS19967.519ENSAOCG00000010066rbms1a9967.008Amphiprion_ocellaris
ENSXMAG00000011405RBMS110087.342ENSAOCG00000014482-10087.342Amphiprion_ocellaris
ENSXMAG00000011405RBMS110087.342ENSAPEG00000018371-10087.342Amphiprion_percula
ENSXMAG00000011405RBMS19967.519ENSAPEG00000023563rbms1a9967.008Amphiprion_percula
ENSXMAG00000011405RBMS110083.797ENSATEG00000018573RBMS110083.544Anabas_testudineus
ENSXMAG00000011405RBMS19965.985ENSATEG00000015450rbms1a9965.473Anabas_testudineus
ENSXMAG00000011405RBMS19476.596ENSAPLG00000007282RBMS19476.596Anas_platyrhynchos
ENSXMAG00000011405RBMS110073.600ENSACAG00000011984RBMS18273.116Anolis_carolinensis
ENSXMAG00000011405RBMS18671.429ENSANAG00000024424RBMS110075.155Aotus_nancymaae
ENSXMAG00000011405RBMS19965.985ENSACLG00000021512rbms1a9966.496Astatotilapia_calliptera
ENSXMAG00000011405RBMS110085.823ENSACLG00000013048RBMS110085.823Astatotilapia_calliptera
ENSXMAG00000011405RBMS110074.747ENSAMXG00000002146rbms1a9972.727Astyanax_mexicanus
ENSXMAG00000011405RBMS110077.525ENSAMXG00000009969RBMS110077.525Astyanax_mexicanus
ENSXMAG00000011405RBMS19774.807ENSBTAG00000005180RBMS110073.333Bos_taurus
ENSXMAG00000011405RBMS19968.132ENSCJAG00000022465-9970.725Callithrix_jacchus
ENSXMAG00000011405RBMS110070.270ENSCJAG00000012871-9973.138Callithrix_jacchus
ENSXMAG00000011405RBMS19475.798ENSCJAG00000014861-9575.266Callithrix_jacchus
ENSXMAG00000011405RBMS19774.550ENSCAFG00000009922RBMS110073.086Canis_familiaris
ENSXMAG00000011405RBMS19474.734ENSCAFG00020006120RBMS110069.834Canis_lupus_dingo
ENSXMAG00000011405RBMS19475.000ENSCHIG00000023380RBMS19375.000Capra_hircus
ENSXMAG00000011405RBMS19475.798ENSTSYG00000005584RBMS19475.284Carlito_syrichta
ENSXMAG00000011405RBMS19475.532ENSCPOG00000012310RBMS19971.939Cavia_porcellus
ENSXMAG00000011405RBMS19475.798ENSCCAG00000033841RBMS19775.798Cebus_capucinus
ENSXMAG00000011405RBMS19475.798ENSCATG00000043032RBMS19875.798Cercocebus_atys
ENSXMAG00000011405RBMS19475.266ENSCLAG00000003031RBMS19475.266Chinchilla_lanigera
ENSXMAG00000011405RBMS19475.798ENSCSAG00000015687RBMS19375.798Chlorocebus_sabaeus
ENSXMAG00000011405RBMS110076.427ENSCPBG00000026455RBMS110076.427Chrysemys_picta_bellii
ENSXMAG00000011405RBMS19475.798ENSCANG00000042152RBMS19775.798Colobus_angolensis_palliatus
ENSXMAG00000011405RBMS110069.834ENSCGRG00001022833Rbms110069.834Cricetulus_griseus_chok1gshd
ENSXMAG00000011405RBMS19475.000ENSCGRG00000008824Rbms19971.939Cricetulus_griseus_crigri
ENSXMAG00000011405RBMS19965.473ENSCSEG00000000889rbms1a9964.962Cynoglossus_semilaevis
ENSXMAG00000011405RBMS110083.123ENSCSEG00000010652RBMS110080.605Cynoglossus_semilaevis
ENSXMAG00000011405RBMS110090.886ENSCVAG00000002027RBMS110089.873Cyprinodon_variegatus
ENSXMAG00000011405RBMS19966.496ENSCVAG00000014698rbms1a9965.729Cyprinodon_variegatus
ENSXMAG00000011405RBMS110074.623ENSDARG00000074023rbms1a9972.613Danio_rerio
ENSXMAG00000011405RBMS19469.293ENSDNOG00000040691RBMS19572.554Dasypus_novemcinctus
ENSXMAG00000011405RBMS19475.532ENSDORG00000007103Rbms19475.532Dipodomys_ordii
ENSXMAG00000011405RBMS19466.755ENSETEG00000012135RBMS19966.755Echinops_telfairi
ENSXMAG00000011405RBMS19774.550ENSEASG00005023132RBMS110073.086Equus_asinus_asinus
ENSXMAG00000011405RBMS19475.266ENSECAG00000019894RBMS110069.834Equus_caballus
ENSXMAG00000011405RBMS17189.796ENSEEUG00000005628RBMS17284.932Erinaceus_europaeus
ENSXMAG00000011405RBMS19670.712ENSELUG00000019328RBMS19470.712Esox_lucius
ENSXMAG00000011405RBMS19965.816ENSELUG00000018923rbms1a9966.837Esox_lucius
ENSXMAG00000011405RBMS19475.000ENSFCAG00000012524RBMS19474.432Felis_catus
ENSXMAG00000011405RBMS19474.212ENSFALG00000004440RBMS19476.989Ficedula_albicollis
ENSXMAG00000011405RBMS19774.550ENSFDAG00000015692RBMS19971.939Fukomys_damarensis
ENSXMAG00000011405RBMS19966.496ENSFHEG00000005662rbms1a9772.683Fundulus_heteroclitus
ENSXMAG00000011405RBMS110090.380ENSFHEG00000000720RBMS110090.380Fundulus_heteroclitus
ENSXMAG00000011405RBMS19361.756ENSGMOG00000000525rbms1a9964.706Gadus_morhua
ENSXMAG00000011405RBMS19776.093ENSGALG00000011132RBMS19676.093Gallus_gallus
ENSXMAG00000011405RBMS110097.201ENSGAFG00000007708RBMS110097.201Gambusia_affinis
ENSXMAG00000011405RBMS19365.294ENSGAFG00000011633rbms1a9568.605Gambusia_affinis
ENSXMAG00000011405RBMS110083.038ENSGACG00000005671RBMS110083.291Gasterosteus_aculeatus
ENSXMAG00000011405RBMS19761.559ENSGACG00000015174rbms1a9070.093Gasterosteus_aculeatus
ENSXMAG00000011405RBMS110076.427ENSGAGG00000007866RBMS110076.427Gopherus_agassizii
ENSXMAG00000011405RBMS19773.454ENSGGOG00000043756-10071.852Gorilla_gorilla
ENSXMAG00000011405RBMS19475.798ENSGGOG00000001264RBMS19775.798Gorilla_gorilla
ENSXMAG00000011405RBMS19487.366ENSHBUG00000004516RBMS19887.366Haplochromis_burtoni
ENSXMAG00000011405RBMS19965.985ENSHBUG00000004802rbms1a9966.496Haplochromis_burtoni
ENSXMAG00000011405RBMS19475.467ENSHGLG00000010387RBMS19871.867Heterocephalus_glaber_female
ENSXMAG00000011405RBMS19475.467ENSHGLG00100014105RBMS19871.867Heterocephalus_glaber_male
ENSXMAG00000011405RBMS110081.013ENSHCOG00000016668RBMS110081.013Hippocampus_comes
ENSXMAG00000011405RBMS19965.985ENSHCOG00000020097rbms1a9965.473Hippocampus_comes
ENSXMAG00000011405RBMS110079.747ENSIPUG00000014677RBMS110079.747Ictalurus_punctatus
ENSXMAG00000011405RBMS110074.242ENSIPUG00000010131RBMS19972.222Ictalurus_punctatus
ENSXMAG00000011405RBMS19475.798ENSSTOG00000012501RBMS19972.194Ictidomys_tridecemlineatus
ENSXMAG00000011405RBMS19474.468ENSJJAG00000016543Rbms19374.468Jaculus_jaculus
ENSXMAG00000011405RBMS110087.342ENSKMAG00000013911RBMS110087.342Kryptolebias_marmoratus
ENSXMAG00000011405RBMS19965.051ENSKMAG00000011839-9964.541Kryptolebias_marmoratus
ENSXMAG00000011405RBMS19966.496ENSLBEG00000025962rbms1a9965.985Labrus_bergylta
ENSXMAG00000011405RBMS110085.570ENSLBEG00000005787RBMS110085.570Labrus_bergylta
ENSXMAG00000011405RBMS110074.442ENSLACG00000004324RBMS19974.442Latimeria_chalumnae
ENSXMAG00000011405RBMS110081.772ENSLOCG00000008622rbms1a10081.772Lepisosteus_oculatus
ENSXMAG00000011405RBMS19474.468ENSLAFG00000017217RBMS19874.468Loxodonta_africana
ENSXMAG00000011405RBMS19475.798ENSMFAG00000000274RBMS19875.798Macaca_fascicularis
ENSXMAG00000011405RBMS19774.169ENSMMUG00000016825RBMS19875.798Macaca_mulatta
ENSXMAG00000011405RBMS19475.798ENSMNEG00000039425RBMS19875.798Macaca_nemestrina
ENSXMAG00000011405RBMS19475.532ENSMLEG00000031517RBMS19875.532Mandrillus_leucophaeus
ENSXMAG00000011405RBMS19964.962ENSMAMG00000005018rbms1a9964.450Mastacembelus_armatus
ENSXMAG00000011405RBMS110082.532ENSMAMG00000003159-10083.291Mastacembelus_armatus
ENSXMAG00000011405RBMS19965.985ENSMZEG00005005661rbms1a9966.496Maylandia_zebra
ENSXMAG00000011405RBMS18883.129ENSMZEG00005007313RBMS19187.117Maylandia_zebra
ENSXMAG00000011405RBMS19474.148ENSMGAG00000011054RBMS110076.900Meleagris_gallopavo
ENSXMAG00000011405RBMS110069.834ENSMAUG00000008550Rbms110069.834Mesocricetus_auratus
ENSXMAG00000011405RBMS19475.000ENSMICG00000008325RBMS19875.000Microcebus_murinus
ENSXMAG00000011405RBMS110069.359ENSMOCG00000022617Rbms110069.359Microtus_ochrogaster
ENSXMAG00000011405RBMS110085.570ENSMMOG00000003707RBMS110085.570Mola_mola
ENSXMAG00000011405RBMS19962.148ENSMMOG00000018249rbms1a9961.637Mola_mola
ENSXMAG00000011405RBMS19476.862ENSMODG00000005250RBMS19376.862Monodelphis_domestica
ENSXMAG00000011405RBMS19965.990ENSMALG00000014235rbms1a9965.482Monopterus_albus
ENSXMAG00000011405RBMS19681.890ENSMALG00000015715-10082.278Monopterus_albus
ENSXMAG00000011405RBMS19969.784MGP_CAROLIEiJ_G0023586Rbms110069.359Mus_caroli
ENSXMAG00000011405RBMS19969.784ENSMUSG00000026970Rbms110069.359Mus_musculus
ENSXMAG00000011405RBMS19972.319MGP_PahariEiJ_G0025037Rbms110071.852Mus_pahari
ENSXMAG00000011405RBMS19970.024MGP_SPRETEiJ_G0024508Rbms19480.214Mus_spretus
ENSXMAG00000011405RBMS19471.939ENSMPUG00000000539RBMS19371.939Mustela_putorius_furo
ENSXMAG00000011405RBMS19471.320ENSMLUG00000008762RBMS19471.320Myotis_lucifugus
ENSXMAG00000011405RBMS110069.121ENSNGAG00000013636Rbms110069.121Nannospalax_galili
ENSXMAG00000011405RBMS18866.667ENSNBRG00000020217rbms1a9567.241Neolamprologus_brichardi
ENSXMAG00000011405RBMS19478.161ENSNBRG00000015151RBMS19481.662Neolamprologus_brichardi
ENSXMAG00000011405RBMS19475.798ENSNLEG00000001667RBMS19675.798Nomascus_leucogenys
ENSXMAG00000011405RBMS18665.217ENSMEUG00000000746RBMS110065.217Notamacropus_eugenii
ENSXMAG00000011405RBMS19468.883ENSOPRG00000012431RBMS19368.883Ochotona_princeps
ENSXMAG00000011405RBMS19474.734ENSODEG00000013934RBMS19374.734Octodon_degus
ENSXMAG00000011405RBMS110087.089ENSONIG00000008934RBMS110087.089Oreochromis_niloticus
ENSXMAG00000011405RBMS19965.473ENSONIG00000003329rbms1a9965.985Oreochromis_niloticus
ENSXMAG00000011405RBMS19477.926ENSOANG00000006166RBMS19577.926Ornithorhynchus_anatinus
ENSXMAG00000011405RBMS15453.909ENSOANG00000004477-9954.098Ornithorhynchus_anatinus
ENSXMAG00000011405RBMS19475.266ENSOCUG00000017365RBMS18875.266Oryctolagus_cuniculus
ENSXMAG00000011405RBMS110080.303ENSORLG00000016818RBMS19981.818Oryzias_latipes
ENSXMAG00000011405RBMS19963.959ENSORLG00000003917rbms1a9963.427Oryzias_latipes
ENSXMAG00000011405RBMS110080.303ENSORLG00020022335RBMS19981.818Oryzias_latipes_hni
ENSXMAG00000011405RBMS19963.683ENSORLG00020018663rbms1a9963.171Oryzias_latipes_hni
ENSXMAG00000011405RBMS19963.939ENSORLG00015016556rbms1a9963.427Oryzias_latipes_hsok
ENSXMAG00000011405RBMS110080.303ENSORLG00015018208RBMS19981.818Oryzias_latipes_hsok
ENSXMAG00000011405RBMS110081.519ENSOMEG00000002394RBMS19983.544Oryzias_melastigma
ENSXMAG00000011405RBMS19471.469ENSOGAG00000002900RBMS19474.859Otolemur_garnettii
ENSXMAG00000011405RBMS19475.000ENSOARG00000006870RBMS19375.000Ovis_aries
ENSXMAG00000011405RBMS19475.798ENSPPAG00000040083RBMS19875.798Pan_paniscus
ENSXMAG00000011405RBMS19473.404ENSPPAG00000036520-9973.404Pan_paniscus
ENSXMAG00000011405RBMS19475.000ENSPPRG00000005040RBMS19474.432Panthera_pardus
ENSXMAG00000011405RBMS19475.000ENSPTIG00000021240RBMS19474.432Panthera_tigris_altaica
ENSXMAG00000011405RBMS19473.670ENSPTRG00000039358-9773.670Pan_troglodytes
ENSXMAG00000011405RBMS19475.798ENSPTRG00000052304RBMS19875.798Pan_troglodytes
ENSXMAG00000011405RBMS19475.798ENSPANG00000001383RBMS19875.798Papio_anubis
ENSXMAG00000011405RBMS110073.924ENSPKIG00000012818rbms1a10074.430Paramormyrops_kingsleyae
ENSXMAG00000011405RBMS110077.078ENSPKIG00000001498rbms1a10075.315Paramormyrops_kingsleyae
ENSXMAG00000011405RBMS19477.394ENSPSIG00000010240RBMS19575.907Pelodiscus_sinensis
ENSXMAG00000011405RBMS19961.637ENSPMGG00000004341rbms1a9961.637Periophthalmus_magnuspinnatus
ENSXMAG00000011405RBMS19373.988ENSPMGG00000006310RBMS19674.785Periophthalmus_magnuspinnatus
ENSXMAG00000011405RBMS19475.266ENSPEMG00000009449Rbms19575.266Peromyscus_maniculatus_bairdii
ENSXMAG00000011405RBMS110074.568ENSPCIG00000018405RBMS110074.568Phascolarctos_cinereus
ENSXMAG00000011405RBMS110098.219ENSPFOG00000017483RBMS110098.219Poecilia_formosa
ENSXMAG00000011405RBMS19966.496ENSPFOG00000016116rbms1a9965.985Poecilia_formosa
ENSXMAG00000011405RBMS19966.496ENSPLAG00000013864rbms1a9965.985Poecilia_latipinna
ENSXMAG00000011405RBMS110098.473ENSPLAG00000000920RBMS110098.473Poecilia_latipinna
ENSXMAG00000011405RBMS19966.496ENSPMEG00000016185rbms1a9965.985Poecilia_mexicana
ENSXMAG00000011405RBMS110098.219ENSPMEG00000015838RBMS110098.219Poecilia_mexicana
ENSXMAG00000011405RBMS19966.496ENSPREG00000020161rbms1a9965.985Poecilia_reticulata
ENSXMAG00000011405RBMS110098.219ENSPREG00000008146RBMS110098.219Poecilia_reticulata
ENSXMAG00000011405RBMS19472.449ENSPPYG00000012879-9372.449Pongo_abelii
ENSXMAG00000011405RBMS19470.213ENSPCAG00000009673RBMS19370.213Procavia_capensis
ENSXMAG00000011405RBMS19475.000ENSPCOG00000027294RBMS19474.432Propithecus_coquereli
ENSXMAG00000011405RBMS18190.000ENSPVAG00000010429RBMS19365.426Pteropus_vampyrus
ENSXMAG00000011405RBMS110086.329ENSPNYG00000002643RBMS110086.329Pundamilia_nyererei
ENSXMAG00000011405RBMS19471.264ENSPNAG00000010225rbms1a9871.576Pygocentrus_nattereri
ENSXMAG00000011405RBMS110079.798ENSPNAG00000023479RBMS110079.798Pygocentrus_nattereri
ENSXMAG00000011405RBMS19374.731ENSRNOG00000008482Rbms19771.173Rattus_norvegicus
ENSXMAG00000011405RBMS110070.546ENSRBIG00000044262RBMS19875.332Rhinopithecus_bieti
ENSXMAG00000011405RBMS110070.784ENSRROG00000043108RBMS19875.798Rhinopithecus_roxellana
ENSXMAG00000011405RBMS19474.084ENSSBOG00000034705RBMS19874.084Saimiri_boliviensis_boliviensis
ENSXMAG00000011405RBMS19476.596ENSSHAG00000012271RBMS110071.884Sarcophilus_harrisii
ENSXMAG00000011405RBMS19472.126ENSSFOG00015014493rbms1a9575.358Scleropages_formosus
ENSXMAG00000011405RBMS110079.747ENSSFOG00015022929rbms110079.747Scleropages_formosus
ENSXMAG00000011405RBMS19762.323ENSSMAG00000012722rbms1a9568.314Scophthalmus_maximus
ENSXMAG00000011405RBMS110084.051ENSSMAG00000012152RBMS19683.797Scophthalmus_maximus
ENSXMAG00000011405RBMS19967.008ENSSDUG00000020602rbms1a9966.496Seriola_dumerili
ENSXMAG00000011405RBMS110087.089ENSSDUG00000018803RBMS110087.089Seriola_dumerili
ENSXMAG00000011405RBMS19967.008ENSSLDG00000009495rbms1a9966.496Seriola_lalandi_dorsalis
ENSXMAG00000011405RBMS110086.835ENSSLDG00000016556RBMS110086.835Seriola_lalandi_dorsalis
ENSXMAG00000011405RBMS18158.642ENSSARG00000011085RBMS18058.642Sorex_araneus
ENSXMAG00000011405RBMS19474.432ENSSPUG00000017163RBMS19477.841Sphenodon_punctatus
ENSXMAG00000011405RBMS19967.263ENSSPAG00000005371rbms1a9966.752Stegastes_partitus
ENSXMAG00000011405RBMS110088.101ENSSPAG00000000059RBMS110088.101Stegastes_partitus
ENSXMAG00000011405RBMS19772.494ENSSSCG00000015888RBMS110072.593Sus_scrofa
ENSXMAG00000011405RBMS19476.862ENSTGUG00000006606RBMS19376.862Taeniopygia_guttata
ENSXMAG00000011405RBMS110081.864ENSTRUG00000005466-10080.101Takifugu_rubripes
ENSXMAG00000011405RBMS19964.975ENSTRUG00000017155rbms1a9964.467Takifugu_rubripes
ENSXMAG00000011405RBMS110078.320ENSTNIG00000016496RBMS19784.483Tetraodon_nigroviridis
ENSXMAG00000011405RBMS19661.932ENSTNIG00000009477rbms1a9865.204Tetraodon_nigroviridis
ENSXMAG00000011405RBMS19468.351ENSTBEG00000016156RBMS19968.351Tupaia_belangeri
ENSXMAG00000011405RBMS19475.266ENSTTRG00000011058RBMS19975.266Tursiops_truncatus
ENSXMAG00000011405RBMS19475.000ENSUAMG00000022331RBMS19375.000Ursus_americanus
ENSXMAG00000011405RBMS19475.000ENSUMAG00000008605RBMS19775.000Ursus_maritimus
ENSXMAG00000011405RBMS18878.063ENSVPAG00000002716RBMS19378.063Vicugna_pacos
ENSXMAG00000011405RBMS19471.920ENSVVUG00000018682RBMS19474.716Vulpes_vulpes
ENSXMAG00000011405RBMS110066.578ENSXETG00000016204rbms19570.986Xenopus_tropicalis
ENSXMAG00000011405RBMS19398.638ENSXCOG00000000211RBMS110098.638Xiphophorus_couchianus
ENSXMAG00000011405RBMS19963.683ENSXCOG00000001659rbms1a9963.171Xiphophorus_couchianus
ENSXMAG00000011405RBMS19966.240ENSXMAG00000001802rbms1a9965.729Xiphophorus_maculatus

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