EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011494 (Gene tree)
Gene ID: 102230601
Gene Symbol: -
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8442 bases
Position: chr5:5167685-5176126
Accession: 102230601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000011517	Gar1	PF04410.14	7.3e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011531	-	5605	XM_014474704	ENSXMAP00000011517	480 (aa)	XP_014330190	M4AAM3

Gene Model

Click here to download ENSXMAG00000011494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011494	-	66	61.890	ENSAPOG00000007663	-	95	57.002	Acanthochromis_polyacanthus
ENSXMAG00000011494	-	65	64.706	ENSAOCG00000003518	-	94	59.204	Amphiprion_ocellaris
ENSXMAG00000011494	-	67	64.157	ENSAPEG00000004453	-	94	59.801	Amphiprion_percula
ENSXMAG00000011494	-	93	53.564	ENSATEG00000003514	-	86	53.222	Anabas_testudineus
ENSXMAG00000011494	-	53	46.792	ENSANAG00000025253	NAF1	93	62.500	Aotus_nancymaae
ENSXMAG00000011494	-	80	56.061	ENSACLG00000017092	-	69	65.517	Astatotilapia_calliptera
ENSXMAG00000011494	-	56	45.788	ENSAMXG00000030034	naf1	68	48.750	Astyanax_mexicanus
ENSXMAG00000011494	-	56	41.776	ENSCJAG00000012406	NAF1	95	62.500	Callithrix_jacchus
ENSXMAG00000011494	-	64	56.250	ENSCAPG00000017838	NAF1	90	55.959	Cavia_aperea
ENSXMAG00000011494	-	58	41.100	ENSCPOG00000010331	NAF1	62	42.089	Cavia_porcellus
ENSXMAG00000011494	-	51	47.761	ENSCCAG00000030023	NAF1	95	62.500	Cebus_capucinus
ENSXMAG00000011494	-	89	43.844	ENSCSEG00000010914	-	54	56.809	Cynoglossus_semilaevis
ENSXMAG00000011494	-	60	70.103	ENSCVAG00000003483	-	89	69.072	Cyprinodon_variegatus
ENSXMAG00000011494	-	60	46.154	ENSDARG00000057929	naf1	52	49.057	Danio_rerio
ENSXMAG00000011494	-	54	44.792	ENSDORG00000011327	Naf1	50	50.000	Dipodomys_ordii
ENSXMAG00000011494	-	56	43.816	ENSECAG00000016738	NAF1	62	41.987	Equus_caballus
ENSXMAG00000011494	-	66	43.960	ENSFCAG00000031652	NAF1	54	46.743	Felis_catus
ENSXMAG00000011494	-	87	69.668	ENSFHEG00000015835	-	96	67.797	Fundulus_heteroclitus
ENSXMAG00000011494	-	96	94.168	ENSGAFG00000017883	-	93	94.168	Gambusia_affinis
ENSXMAG00000011494	-	55	62.687	ENSHBUG00000002404	-	58	79.545	Haplochromis_burtoni
ENSXMAG00000011494	-	51	47.232	ENSJJAG00000012147	-	62	52.915	Jaculus_jaculus
ENSXMAG00000011494	-	95	53.498	ENSKMAG00000005434	-	97	52.439	Kryptolebias_marmoratus
ENSXMAG00000011494	-	67	62.209	ENSLBEG00000020414	-	81	59.710	Labrus_bergylta
ENSXMAG00000011494	-	56	67.778	ENSMAMG00000003269	-	97	68.729	Mastacembelus_armatus
ENSXMAG00000011494	-	80	56.345	ENSMZEG00005005830	-	71	64.138	Maylandia_zebra
ENSXMAG00000011494	-	50	45.703	ENSMGAG00000002133	NAF1	61	52.577	Meleagris_gallopavo
ENSXMAG00000011494	-	79	56.468	ENSMALG00000018482	-	96	52.331	Monopterus_albus
ENSXMAG00000011494	-	53	46.792	ENSODEG00000006528	NAF1	63	48.679	Octodon_degus
ENSXMAG00000011494	-	50	68.313	ENSONIG00000001826	-	83	64.828	Oreochromis_niloticus
ENSXMAG00000011494	-	75	55.270	ENSORLG00000002191	-	61	55.394	Oryzias_latipes
ENSXMAG00000011494	-	75	55.013	ENSORLG00020013478	-	61	55.394	Oryzias_latipes_hni
ENSXMAG00000011494	-	75	54.756	ENSORLG00015012985	-	60	55.102	Oryzias_latipes_hsok
ENSXMAG00000011494	-	64	57.009	ENSOMEG00000021322	-	67	54.942	Oryzias_melastigma
ENSXMAG00000011494	-	54	46.739	ENSPANG00000015574	NAF1	95	62.500	Papio_anubis
ENSXMAG00000011494	-	96	90.558	ENSPFOG00000010705	-	95	94.872	Poecilia_formosa
ENSXMAG00000011494	-	96	90.987	ENSPLAG00000002200	-	96	89.914	Poecilia_latipinna
ENSXMAG00000011494	-	96	88.273	ENSPMEG00000004437	-	96	88.486	Poecilia_mexicana
ENSXMAG00000011494	-	96	88.412	ENSPREG00000022551	-	96	88.627	Poecilia_reticulata
ENSXMAG00000011494	-	80	50.127	ENSPNYG00000021456	-	51	77.215	Pundamilia_nyererei
ENSXMAG00000011494	-	55	44.361	ENSPNAG00000001219	naf1	56	48.117	Pygocentrus_nattereri
ENSXMAG00000011494	-	66	46.429	ENSRBIG00000030027	NAF1	95	62.500	Rhinopithecus_bieti
ENSXMAG00000011494	-	54	45.993	ENSSBOG00000002085	NAF1	95	62.500	Saimiri_boliviensis_boliviensis
ENSXMAG00000011494	-	63	59.937	ENSSMAG00000015529	-	95	54.726	Scophthalmus_maximus
ENSXMAG00000011494	-	64	68.553	ENSSDUG00000005987	-	95	62.312	Seriola_dumerili
ENSXMAG00000011494	-	59	62.105	ENSTRUG00000011908	-	75	55.298	Takifugu_rubripes
ENSXMAG00000011494	-	51	44.074	ENSTTRG00000010106	NAF1	50	47.137	Tursiops_truncatus
ENSXMAG00000011494	-	53	45.283	ENSVVUG00000022303	NAF1	70	47.490	Vulpes_vulpes
ENSXMAG00000011494	-	60	90.345	ENSXCOG00000013058	-	91	90.690	Xiphophorus_couchianus