EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011508 (Gene tree)
Gene ID: 102217413
Gene Symbol: emg1
Alias: zgc:136360
Full Name: EMG1%2C N1-specific pseudouridine methyltransferase
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5745 bases
Position: chr3:1398105-1403849
Accession: 102217413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000011539	EMG1	PF03587.14	2.6e-82	1	1
ENSXMAP00000024202	EMG1	PF03587.14	1.3e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000035860	-	630	-	ENSXMAP00000024202	209 (aa)	-	-
ENSXMAT00000011553	-	856	XM_005798770	ENSXMAP00000011539	236 (aa)	XP_005798827	M4AAP5

Gene Model

Click here to download ENSXMAG00000011508's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011508	emg1	98	68.240	ENSG00000126749	EMG1	95	68.240	Homo_sapiens
ENSXMAG00000011508	emg1	100	86.864	ENSAPOG00000023213	emg1	100	86.864	Acanthochromis_polyacanthus
ENSXMAG00000011508	emg1	98	69.099	ENSAMEG00000013753	EMG1	95	69.099	Ailuropoda_melanoleuca
ENSXMAG00000011508	emg1	99	90.598	ENSACIG00000011786	emg1	98	90.598	Amphilophus_citrinellus
ENSXMAG00000011508	emg1	99	88.462	ENSAOCG00000006520	emg1	95	88.462	Amphiprion_ocellaris
ENSXMAG00000011508	emg1	99	88.462	ENSAPEG00000011094	emg1	95	88.462	Amphiprion_percula
ENSXMAG00000011508	emg1	99	88.841	ENSATEG00000021642	emg1	98	88.841	Anabas_testudineus
ENSXMAG00000011508	emg1	80	76.190	ENSAPLG00000005308	EMG1	100	76.190	Anas_platyrhynchos
ENSXMAG00000011508	emg1	88	76.923	ENSACAG00000007210	EMG1	91	76.923	Anolis_carolinensis
ENSXMAG00000011508	emg1	98	67.521	ENSANAG00000022855	-	96	67.521	Aotus_nancymaae
ENSXMAG00000011508	emg1	98	63.948	ENSANAG00000029536	-	95	63.948	Aotus_nancymaae
ENSXMAG00000011508	emg1	99	89.787	ENSACLG00000023688	emg1	99	89.787	Astatotilapia_calliptera
ENSXMAG00000011508	emg1	99	85.957	ENSAMXG00000018994	emg1	98	85.957	Astyanax_mexicanus
ENSXMAG00000011508	emg1	98	67.811	ENSBTAG00000013126	EMG1	67	67.811	Bos_taurus
ENSXMAG00000011508	emg1	94	52.632	WBGene00012652	Y39A1A.14	99	52.632	Caenorhabditis_elegans
ENSXMAG00000011508	emg1	96	69.737	ENSCJAG00000007120	EMG1	93	69.737	Callithrix_jacchus
ENSXMAG00000011508	emg1	98	68.670	ENSCAFG00000014424	EMG1	95	68.670	Canis_familiaris
ENSXMAG00000011508	emg1	98	68.670	ENSCAFG00020003127	EMG1	95	68.670	Canis_lupus_dingo
ENSXMAG00000011508	emg1	98	67.811	ENSCHIG00000003188	EMG1	95	67.811	Capra_hircus
ENSXMAG00000011508	emg1	64	74.172	ENSTSYG00000035847	EMG1	100	74.172	Carlito_syrichta
ENSXMAG00000011508	emg1	64	75.497	ENSCAPG00000011212	EMG1	100	75.497	Cavia_aperea
ENSXMAG00000011508	emg1	98	67.949	ENSCPOG00000025388	EMG1	96	67.949	Cavia_porcellus
ENSXMAG00000011508	emg1	64	52.632	ENSCCAG00000024274	-	100	52.632	Cebus_capucinus
ENSXMAG00000011508	emg1	61	61.379	ENSCCAG00000034889	-	85	61.379	Cebus_capucinus
ENSXMAG00000011508	emg1	98	68.240	ENSCCAG00000033309	-	95	68.240	Cebus_capucinus
ENSXMAG00000011508	emg1	98	67.811	ENSCATG00000016750	EMG1	95	67.811	Cercocebus_atys
ENSXMAG00000011508	emg1	98	68.376	ENSCLAG00000015067	EMG1	96	68.376	Chinchilla_lanigera
ENSXMAG00000011508	emg1	98	67.811	ENSCSAG00000010140	EMG1	95	67.811	Chlorocebus_sabaeus
ENSXMAG00000011508	emg1	98	69.957	ENSCHOG00000002886	EMG1	95	69.957	Choloepus_hoffmanni
ENSXMAG00000011508	emg1	87	71.585	ENSCPBG00000005167	EMG1	64	71.892	Chrysemys_picta_bellii
ENSXMAG00000011508	emg1	98	65.665	ENSCING00000022202	-	98	65.665	Ciona_intestinalis
ENSXMAG00000011508	emg1	98	64.530	ENSCSAVG00000005612	-	98	64.530	Ciona_savignyi
ENSXMAG00000011508	emg1	98	67.811	ENSCANG00000043101	-	95	67.811	Colobus_angolensis_palliatus
ENSXMAG00000011508	emg1	96	62.115	ENSCANG00000042498	-	100	70.000	Colobus_angolensis_palliatus
ENSXMAG00000011508	emg1	86	77.451	ENSCGRG00001018228	Emg1	84	77.451	Cricetulus_griseus_chok1gshd
ENSXMAG00000011508	emg1	86	77.451	ENSCGRG00000018238	Emg1	84	77.451	Cricetulus_griseus_crigri
ENSXMAG00000011508	emg1	98	87.234	ENSCSEG00000020136	emg1	98	87.234	Cynoglossus_semilaevis
ENSXMAG00000011508	emg1	100	94.492	ENSCVAG00000001164	emg1	100	94.492	Cyprinodon_variegatus
ENSXMAG00000011508	emg1	99	83.830	ENSDARG00000056914	emg1	98	83.830	Danio_rerio
ENSXMAG00000011508	emg1	94	72.197	ENSDNOG00000005533	EMG1	95	70.690	Dasypus_novemcinctus
ENSXMAG00000011508	emg1	83	72.222	ENSDORG00000009795	Emg1	85	72.222	Dipodomys_ordii
ENSXMAG00000011508	emg1	86	64.319	FBgn0029714	CG3527	85	64.319	Drosophila_melanogaster
ENSXMAG00000011508	emg1	64	49.342	ENSETEG00000009111	-	99	49.342	Echinops_telfairi
ENSXMAG00000011508	emg1	93	71.041	ENSEBUG00000008287	emg1	99	64.173	Eptatretus_burgeri
ENSXMAG00000011508	emg1	98	68.670	ENSEASG00005016018	EMG1	95	68.670	Equus_asinus_asinus
ENSXMAG00000011508	emg1	98	69.099	ENSECAG00000022412	EMG1	95	69.099	Equus_caballus
ENSXMAG00000011508	emg1	95	71.556	ENSEEUG00000000065	EMG1	91	71.556	Erinaceus_europaeus
ENSXMAG00000011508	emg1	98	69.528	ENSFCAG00000004288	EMG1	95	69.528	Felis_catus
ENSXMAG00000011508	emg1	86	78.049	ENSFALG00000004617	EMG1	95	72.124	Ficedula_albicollis
ENSXMAG00000011508	emg1	96	70.614	ENSFDAG00000011086	EMG1	93	70.614	Fukomys_damarensis
ENSXMAG00000011508	emg1	62	91.538	ENSFHEG00000014379	emg1	59	91.538	Fundulus_heteroclitus
ENSXMAG00000011508	emg1	58	78.102	ENSFHEG00000014307	emg1	82	78.102	Fundulus_heteroclitus
ENSXMAG00000011508	emg1	99	86.383	ENSGMOG00000011025	emg1	96	86.383	Gadus_morhua
ENSXMAG00000011508	emg1	86	77.561	ENSGALG00000014568	EMG1	89	77.561	Gallus_gallus
ENSXMAG00000011508	emg1	100	97.458	ENSGAFG00000014143	emg1	100	97.458	Gambusia_affinis
ENSXMAG00000011508	emg1	98	87.124	ENSGACG00000010330	emg1	95	87.124	Gasterosteus_aculeatus
ENSXMAG00000011508	emg1	80	76.190	ENSGAGG00000005641	EMG1	100	76.821	Gopherus_agassizii
ENSXMAG00000011508	emg1	98	67.811	ENSGGOG00000004287	EMG1	95	67.811	Gorilla_gorilla
ENSXMAG00000011508	emg1	99	89.787	ENSHBUG00000014862	emg1	99	89.787	Haplochromis_burtoni
ENSXMAG00000011508	emg1	94	71.429	ENSHGLG00000001300	EMG1	91	71.429	Heterocephalus_glaber_female
ENSXMAG00000011508	emg1	94	71.429	ENSHGLG00100011644	EMG1	91	71.429	Heterocephalus_glaber_male
ENSXMAG00000011508	emg1	99	88.511	ENSHCOG00000017870	emg1	99	88.511	Hippocampus_comes
ENSXMAG00000011508	emg1	99	81.702	ENSIPUG00000008261	emg1	98	81.702	Ictalurus_punctatus
ENSXMAG00000011508	emg1	96	70.614	ENSSTOG00000000387	EMG1	93	70.614	Ictidomys_tridecemlineatus
ENSXMAG00000011508	emg1	96	70.614	ENSJJAG00000018448	Emg1	93	70.614	Jaculus_jaculus
ENSXMAG00000011508	emg1	99	89.316	ENSKMAG00000007069	emg1	98	89.316	Kryptolebias_marmoratus
ENSXMAG00000011508	emg1	99	88.889	ENSLBEG00000007424	emg1	98	88.889	Labrus_bergylta
ENSXMAG00000011508	emg1	99	80.851	ENSLOCG00000008451	emg1	96	80.851	Lepisosteus_oculatus
ENSXMAG00000011508	emg1	98	70.386	ENSLAFG00000001314	EMG1	95	70.386	Loxodonta_africana
ENSXMAG00000011508	emg1	98	67.811	ENSMFAG00000037142	EMG1	95	67.811	Macaca_fascicularis
ENSXMAG00000011508	emg1	98	67.811	ENSMMUG00000010207	EMG1	95	67.811	Macaca_mulatta
ENSXMAG00000011508	emg1	98	67.811	ENSMNEG00000040907	EMG1	95	67.811	Macaca_nemestrina
ENSXMAG00000011508	emg1	98	67.811	ENSMLEG00000026029	EMG1	95	67.811	Mandrillus_leucophaeus
ENSXMAG00000011508	emg1	99	89.700	ENSMAMG00000001888	emg1	98	89.700	Mastacembelus_armatus
ENSXMAG00000011508	emg1	99	89.787	ENSMZEG00005017546	emg1	99	89.787	Maylandia_zebra
ENSXMAG00000011508	emg1	86	78.049	ENSMGAG00000014145	EMG1	85	78.049	Meleagris_gallopavo
ENSXMAG00000011508	emg1	96	71.053	ENSMAUG00000011093	Emg1	92	71.053	Mesocricetus_auratus
ENSXMAG00000011508	emg1	98	69.528	ENSMICG00000001790	EMG1	95	69.528	Microcebus_murinus
ENSXMAG00000011508	emg1	96	71.053	ENSMOCG00000022570	Emg1	92	71.053	Microtus_ochrogaster
ENSXMAG00000011508	emg1	99	88.085	ENSMMOG00000016090	emg1	99	88.085	Mola_mola
ENSXMAG00000011508	emg1	94	70.536	ENSMODG00000018161	EMG1	94	68.670	Monodelphis_domestica
ENSXMAG00000011508	emg1	100	87.288	ENSMALG00000022477	emg1	99	87.288	Monopterus_albus
ENSXMAG00000011508	emg1	96	71.053	MGP_CAROLIEiJ_G0028844	Emg1	92	71.053	Mus_caroli
ENSXMAG00000011508	emg1	86	77.451	ENSMUSG00000004268	Emg1	84	77.451	Mus_musculus
ENSXMAG00000011508	emg1	94	71.429	MGP_PahariEiJ_G0022605	Emg1	92	71.429	Mus_pahari
ENSXMAG00000011508	emg1	94	71.429	MGP_SPRETEiJ_G0029886	Emg1	92	71.429	Mus_spretus
ENSXMAG00000011508	emg1	98	69.528	ENSMPUG00000016763	EMG1	95	69.528	Mustela_putorius_furo
ENSXMAG00000011508	emg1	98	67.660	ENSMLUG00000009196	EMG1	96	67.660	Myotis_lucifugus
ENSXMAG00000011508	emg1	94	70.982	ENSNGAG00000022592	Emg1	93	70.982	Nannospalax_galili
ENSXMAG00000011508	emg1	99	89.787	ENSNBRG00000001192	emg1	99	89.787	Neolamprologus_brichardi
ENSXMAG00000011508	emg1	98	67.811	ENSNLEG00000005080	EMG1	95	67.811	Nomascus_leucogenys
ENSXMAG00000011508	emg1	91	67.539	ENSMEUG00000000831	EMG1	90	70.192	Notamacropus_eugenii
ENSXMAG00000011508	emg1	71	70.946	ENSOPRG00000004071	-	91	70.946	Ochotona_princeps
ENSXMAG00000011508	emg1	79	74.468	ENSOPRG00000016878	-	100	74.468	Ochotona_princeps
ENSXMAG00000011508	emg1	86	75.490	ENSODEG00000004059	EMG1	84	75.490	Octodon_degus
ENSXMAG00000011508	emg1	99	90.213	ENSONIG00000012893	emg1	98	90.213	Oreochromis_niloticus
ENSXMAG00000011508	emg1	97	68.831	ENSOCUG00000003603	EMG1	95	68.831	Oryctolagus_cuniculus
ENSXMAG00000011508	emg1	99	88.511	ENSORLG00000012146	emg1	96	88.511	Oryzias_latipes
ENSXMAG00000011508	emg1	99	88.511	ENSORLG00020005499	emg1	99	88.511	Oryzias_latipes_hni
ENSXMAG00000011508	emg1	99	88.511	ENSORLG00015011535	emg1	99	88.511	Oryzias_latipes_hsok
ENSXMAG00000011508	emg1	99	88.936	ENSOMEG00000012687	emg1	99	88.936	Oryzias_melastigma
ENSXMAG00000011508	emg1	94	70.982	ENSOGAG00000006975	EMG1	92	70.982	Otolemur_garnettii
ENSXMAG00000011508	emg1	98	67.234	ENSOARG00000004923	EMG1	96	67.234	Ovis_aries
ENSXMAG00000011508	emg1	98	68.240	ENSPPAG00000033046	EMG1	95	68.240	Pan_paniscus
ENSXMAG00000011508	emg1	98	69.099	ENSPPRG00000012350	EMG1	95	69.099	Panthera_pardus
ENSXMAG00000011508	emg1	98	69.099	ENSPTIG00000000358	EMG1	95	69.099	Panthera_tigris_altaica
ENSXMAG00000011508	emg1	98	68.240	ENSPTRG00000048050	EMG1	95	68.240	Pan_troglodytes
ENSXMAG00000011508	emg1	98	67.811	ENSPANG00000005523	-	95	67.811	Papio_anubis
ENSXMAG00000011508	emg1	98	68.240	ENSPANG00000019398	-	95	68.240	Papio_anubis
ENSXMAG00000011508	emg1	99	82.627	ENSPKIG00000025303	emg1	98	82.627	Paramormyrops_kingsleyae
ENSXMAG00000011508	emg1	89	75.714	ENSPSIG00000011094	EMG1	91	75.714	Pelodiscus_sinensis
ENSXMAG00000011508	emg1	99	90.213	ENSPMGG00000019918	emg1	99	90.213	Periophthalmus_magnuspinnatus
ENSXMAG00000011508	emg1	96	71.491	ENSPEMG00000010244	Emg1	92	71.491	Peromyscus_maniculatus_bairdii
ENSXMAG00000011508	emg1	95	70.667	ENSPCIG00000002814	EMG1	91	70.667	Phascolarctos_cinereus
ENSXMAG00000011508	emg1	100	97.458	ENSPFOG00000013034	emg1	100	97.458	Poecilia_formosa
ENSXMAG00000011508	emg1	100	97.458	ENSPLAG00000000125	emg1	100	97.458	Poecilia_latipinna
ENSXMAG00000011508	emg1	100	97.881	ENSPMEG00000016802	emg1	100	97.881	Poecilia_mexicana
ENSXMAG00000011508	emg1	100	96.186	ENSPREG00000010409	emg1	82	96.186	Poecilia_reticulata
ENSXMAG00000011508	emg1	98	68.240	ENSPPYG00000004215	EMG1	95	68.240	Pongo_abelii
ENSXMAG00000011508	emg1	96	59.649	ENSPCAG00000012368	EMG1	92	59.649	Procavia_capensis
ENSXMAG00000011508	emg1	98	69.099	ENSPCOG00000028560	EMG1	95	69.099	Propithecus_coquereli
ENSXMAG00000011508	emg1	96	70.614	ENSPVAG00000006030	EMG1	93	70.614	Pteropus_vampyrus
ENSXMAG00000011508	emg1	99	89.787	ENSPNYG00000023172	emg1	99	89.787	Pundamilia_nyererei
ENSXMAG00000011508	emg1	99	83.333	ENSPNAG00000019953	emg1	98	83.333	Pygocentrus_nattereri
ENSXMAG00000011508	emg1	94	71.429	ENSRNOG00000012828	Emg1	92	71.429	Rattus_norvegicus
ENSXMAG00000011508	emg1	98	68.240	ENSRBIG00000031315	EMG1	95	68.240	Rhinopithecus_bieti
ENSXMAG00000011508	emg1	98	68.240	ENSRROG00000032961	EMG1	95	68.240	Rhinopithecus_roxellana
ENSXMAG00000011508	emg1	87	48.611	YLR186W	EMG1	86	48.611	Saccharomyces_cerevisiae
ENSXMAG00000011508	emg1	98	68.670	ENSSBOG00000029143	-	95	68.670	Saimiri_boliviensis_boliviensis
ENSXMAG00000011508	emg1	99	48.729	ENSSBOG00000022895	-	97	48.729	Saimiri_boliviensis_boliviensis
ENSXMAG00000011508	emg1	94	70.089	ENSSHAG00000016428	EMG1	95	68.240	Sarcophilus_harrisii
ENSXMAG00000011508	emg1	99	82.627	ENSSFOG00015002421	emg1	98	82.627	Scleropages_formosus
ENSXMAG00000011508	emg1	99	87.983	ENSSMAG00000011806	emg1	98	87.983	Scophthalmus_maximus
ENSXMAG00000011508	emg1	98	90.948	ENSSDUG00000011345	emg1	92	90.948	Seriola_dumerili
ENSXMAG00000011508	emg1	99	91.026	ENSSLDG00000023439	emg1	93	91.026	Seriola_lalandi_dorsalis
ENSXMAG00000011508	emg1	96	58.772	ENSSARG00000002227	EMG1	93	58.772	Sorex_araneus
ENSXMAG00000011508	emg1	88	75.962	ENSSPUG00000014446	EMG1	89	75.962	Sphenodon_punctatus
ENSXMAG00000011508	emg1	99	88.085	ENSSPAG00000005460	emg1	99	88.085	Stegastes_partitus
ENSXMAG00000011508	emg1	98	68.670	ENSSSCG00000026812	EMG1	95	68.670	Sus_scrofa
ENSXMAG00000011508	emg1	86	77.561	ENSTGUG00000013271	EMG1	99	77.561	Taeniopygia_guttata
ENSXMAG00000011508	emg1	99	88.511	ENSTRUG00000001906	emg1	99	88.511	Takifugu_rubripes
ENSXMAG00000011508	emg1	98	90.086	ENSTNIG00000008047	emg1	96	90.086	Tetraodon_nigroviridis
ENSXMAG00000011508	emg1	86	76.471	ENSTBEG00000015406	EMG1	98	76.471	Tupaia_belangeri
ENSXMAG00000011508	emg1	98	55.365	ENSTTRG00000004810	EMG1	95	55.365	Tursiops_truncatus
ENSXMAG00000011508	emg1	98	69.099	ENSUAMG00000026959	EMG1	95	69.099	Ursus_americanus
ENSXMAG00000011508	emg1	97	69.697	ENSUMAG00000003248	EMG1	95	69.697	Ursus_maritimus
ENSXMAG00000011508	emg1	95	71.111	ENSVVUG00000010807	EMG1	95	68.670	Vulpes_vulpes
ENSXMAG00000011508	emg1	86	75.980	ENSXETG00000023917	emg1	99	75.980	Xenopus_tropicalis