EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011604 (Gene tree)
Gene ID: 102224757
Gene Symbol: thoc2
Alias: Tho2|fb73e08|fd21d11|si:bz1o18.2|wu:fb73e08|wu:fd21d11
Full Name: THO complex 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 25375 bases
Position: chr11:21045717-21071091
Accession: 102224757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000031810	Tho2	PF11262.8	7.4e-100	1	1
ENSXMAP00000011671	Tho2	PF11262.8	1.4e-97	1	1
ENSXMAP00000031810	Thoc2	PF11732.8	1.3e-34	1	1
ENSXMAP00000011671	Thoc2	PF11732.8	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011685	-	4473	XM_023342953	ENSXMAP00000011671	1490 (aa)	XP_023198721	M4AB27
ENSXMAT00000026658	-	4122	-	ENSXMAP00000031810	1373 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000011604's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011604	thoc2	100	71.548	ENSG00000125676	THOC2	99	72.874	Homo_sapiens
ENSXMAG00000011604	thoc2	100	90.517	ENSAPOG00000003459	thoc2	94	93.775	Acanthochromis_polyacanthus
ENSXMAG00000011604	thoc2	99	73.381	ENSAMEG00000014841	THOC2	97	71.749	Ailuropoda_melanoleuca
ENSXMAG00000011604	thoc2	99	88.881	ENSACIG00000015022	thoc2	98	89.917	Amphilophus_citrinellus
ENSXMAG00000011604	thoc2	100	90.252	ENSAOCG00000013305	thoc2	99	90.252	Amphiprion_ocellaris
ENSXMAG00000011604	thoc2	100	90.119	ENSAPEG00000004792	thoc2	99	90.119	Amphiprion_percula
ENSXMAG00000011604	thoc2	99	89.408	ENSATEG00000013110	thoc2	97	89.539	Anabas_testudineus
ENSXMAG00000011604	thoc2	98	73.639	ENSAPLG00000010614	THOC2	100	73.674	Anas_platyrhynchos
ENSXMAG00000011604	thoc2	99	73.072	ENSACAG00000011585	THOC2	98	72.137	Anolis_carolinensis
ENSXMAG00000011604	thoc2	100	68.263	ENSANAG00000034037	-	97	71.522	Aotus_nancymaae
ENSXMAG00000011604	thoc2	99	72.258	ENSANAG00000022505	-	98	72.856	Aotus_nancymaae
ENSXMAG00000011604	thoc2	100	86.214	ENSACLG00000012036	thoc2	100	85.752	Astatotilapia_calliptera
ENSXMAG00000011604	thoc2	99	78.764	ENSAMXG00000014184	thoc2	98	75.314	Astyanax_mexicanus
ENSXMAG00000011604	thoc2	99	73.438	ENSBTAG00000008388	THOC2	97	72.080	Bos_taurus
ENSXMAG00000011604	thoc2	99	72.514	ENSBTAG00000047341	-	95	70.921	Bos_taurus
ENSXMAG00000011604	thoc2	94	33.948	WBGene00015813	thoc-2	97	33.240	Caenorhabditis_elegans
ENSXMAG00000011604	thoc2	98	73.343	ENSCJAG00000016157	THOC2	97	74.309	Callithrix_jacchus
ENSXMAG00000011604	thoc2	99	73.580	ENSCAFG00000018574	THOC2	99	71.691	Canis_familiaris
ENSXMAG00000011604	thoc2	99	73.419	ENSCAFG00020002284	THOC2	98	72.172	Canis_lupus_dingo
ENSXMAG00000011604	thoc2	99	73.348	ENSCHIG00000017733	-	96	71.659	Capra_hircus
ENSXMAG00000011604	thoc2	99	72.869	ENSCHIG00000025851	-	97	70.743	Capra_hircus
ENSXMAG00000011604	thoc2	99	72.456	ENSTSYG00000012292	THOC2	97	70.584	Carlito_syrichta
ENSXMAG00000011604	thoc2	99	71.622	ENSCPOG00000038670	THOC2	97	70.368	Cavia_porcellus
ENSXMAG00000011604	thoc2	100	71.612	ENSCCAG00000021906	THOC2	98	71.613	Cebus_capucinus
ENSXMAG00000011604	thoc2	100	71.548	ENSCATG00000003183	THOC2	97	72.080	Cercocebus_atys
ENSXMAG00000011604	thoc2	99	73.153	ENSCLAG00000002641	THOC2	99	71.952	Chinchilla_lanigera
ENSXMAG00000011604	thoc2	100	71.548	ENSCSAG00000018332	THOC2	97	72.080	Chlorocebus_sabaeus
ENSXMAG00000011604	thoc2	95	77.276	ENSCPBG00000012863	THOC2	99	78.319	Chrysemys_picta_bellii
ENSXMAG00000011604	thoc2	84	55.105	ENSCING00000007364	-	99	55.105	Ciona_intestinalis
ENSXMAG00000011604	thoc2	71	56.244	ENSCSAVG00000007923	-	100	73.404	Ciona_savignyi
ENSXMAG00000011604	thoc2	100	71.548	ENSCANG00000035077	THOC2	97	72.080	Colobus_angolensis_palliatus
ENSXMAG00000011604	thoc2	99	71.479	ENSCGRG00001009811	BC005561	96	70.168	Cricetulus_griseus_chok1gshd
ENSXMAG00000011604	thoc2	99	73.082	ENSCGRG00001015509	Thoc2	97	69.949	Cricetulus_griseus_chok1gshd
ENSXMAG00000011604	thoc2	95	73.488	ENSCGRG00000001226	Thoc2	98	69.206	Cricetulus_griseus_crigri
ENSXMAG00000011604	thoc2	99	71.408	ENSCGRG00000000980	BC005561	97	70.168	Cricetulus_griseus_crigri
ENSXMAG00000011604	thoc2	94	89.101	ENSCSEG00000019946	thoc2	99	87.528	Cynoglossus_semilaevis
ENSXMAG00000011604	thoc2	100	92.067	ENSCVAG00000021509	thoc2	99	92.067	Cyprinodon_variegatus
ENSXMAG00000011604	thoc2	99	78.602	ENSDARG00000037503	thoc2	97	76.807	Danio_rerio
ENSXMAG00000011604	thoc2	99	71.560	ENSDNOG00000012487	THOC2	97	70.096	Dasypus_novemcinctus
ENSXMAG00000011604	thoc2	90	45.276	FBgn0031390	tho2	75	45.236	Drosophila_melanogaster
ENSXMAG00000011604	thoc2	94	67.466	ENSETEG00000016183	THOC2	92	66.144	Echinops_telfairi
ENSXMAG00000011604	thoc2	98	72.273	ENSEASG00005017399	THOC2	100	72.650	Equus_asinus_asinus
ENSXMAG00000011604	thoc2	99	73.509	ENSECAG00000010431	THOC2	99	72.194	Equus_caballus
ENSXMAG00000011604	thoc2	75	85.161	ENSEEUG00000015598	THOC2	78	85.161	Erinaceus_europaeus
ENSXMAG00000011604	thoc2	95	88.645	ENSELUG00000007778	thoc2	93	88.645	Esox_lucius
ENSXMAG00000011604	thoc2	99	73.509	ENSFCAG00000008301	THOC2	97	71.951	Felis_catus
ENSXMAG00000011604	thoc2	99	73.626	ENSFALG00000001519	THOC2	97	72.687	Ficedula_albicollis
ENSXMAG00000011604	thoc2	100	71.374	ENSFDAG00000017237	THOC2	99	71.981	Fukomys_damarensis
ENSXMAG00000011604	thoc2	98	94.030	ENSFHEG00000001695	thoc2	99	94.098	Fundulus_heteroclitus
ENSXMAG00000011604	thoc2	99	80.466	ENSGMOG00000000069	thoc2	97	77.630	Gadus_morhua
ENSXMAG00000011604	thoc2	99	74.344	ENSGALG00000008507	THOC2	96	74.913	Gallus_gallus
ENSXMAG00000011604	thoc2	100	98.596	ENSGAFG00000005902	thoc2	100	98.596	Gambusia_affinis
ENSXMAG00000011604	thoc2	99	89.099	ENSGACG00000020367	thoc2	97	85.942	Gasterosteus_aculeatus
ENSXMAG00000011604	thoc2	99	72.950	ENSGAGG00000024263	THOC2	99	72.938	Gopherus_agassizii
ENSXMAG00000011604	thoc2	100	71.548	ENSGGOG00000000486	THOC2	97	72.080	Gorilla_gorilla
ENSXMAG00000011604	thoc2	99	89.474	ENSHBUG00000003516	thoc2	96	90.128	Haplochromis_burtoni
ENSXMAG00000011604	thoc2	99	73.172	ENSHGLG00000004222	THOC2	97	71.245	Heterocephalus_glaber_female
ENSXMAG00000011604	thoc2	94	77.742	ENSHGLG00100011595	THOC2	90	77.914	Heterocephalus_glaber_male
ENSXMAG00000011604	thoc2	99	85.046	ENSHCOG00000006276	thoc2	99	85.046	Hippocampus_comes
ENSXMAG00000011604	thoc2	100	76.868	ENSIPUG00000015876	thoc2	99	76.162	Ictalurus_punctatus
ENSXMAG00000011604	thoc2	99	73.295	ENSSTOG00000009134	THOC2	97	71.621	Ictidomys_tridecemlineatus
ENSXMAG00000011604	thoc2	99	73.186	ENSJJAG00000017282	Thoc2	97	71.713	Jaculus_jaculus
ENSXMAG00000011604	thoc2	99	69.718	ENSJJAG00000008784	BC005561	97	68.387	Jaculus_jaculus
ENSXMAG00000011604	thoc2	95	94.154	ENSKMAG00000012263	thoc2	99	92.348	Kryptolebias_marmoratus
ENSXMAG00000011604	thoc2	100	88.730	ENSLBEG00000003049	thoc2	99	89.193	Labrus_bergylta
ENSXMAG00000011604	thoc2	99	75.796	ENSLACG00000016494	THOC2	97	74.426	Latimeria_chalumnae
ENSXMAG00000011604	thoc2	100	78.788	ENSLOCG00000014546	thoc2	97	78.701	Lepisosteus_oculatus
ENSXMAG00000011604	thoc2	99	73.509	ENSLAFG00000003146	THOC2	97	71.951	Loxodonta_africana
ENSXMAG00000011604	thoc2	100	71.548	ENSMFAG00000042215	THOC2	97	72.080	Macaca_fascicularis
ENSXMAG00000011604	thoc2	100	71.548	ENSMMUG00000003745	THOC2	99	72.140	Macaca_mulatta
ENSXMAG00000011604	thoc2	100	71.548	ENSMNEG00000033627	THOC2	97	72.080	Macaca_nemestrina
ENSXMAG00000011604	thoc2	100	71.548	ENSMLEG00000034817	THOC2	98	71.613	Mandrillus_leucophaeus
ENSXMAG00000011604	thoc2	100	88.332	ENSMAMG00000012993	thoc2	97	88.332	Mastacembelus_armatus
ENSXMAG00000011604	thoc2	100	89.601	ENSMZEG00005015842	thoc2	97	89.470	Maylandia_zebra
ENSXMAG00000011604	thoc2	100	73.077	ENSMGAG00000007345	THOC2	99	73.047	Meleagris_gallopavo
ENSXMAG00000011604	thoc2	98	73.305	ENSMAUG00000002356	Thoc2	97	71.676	Mesocricetus_auratus
ENSXMAG00000011604	thoc2	99	73.438	ENSMICG00000011840	THOC2	97	72.015	Microcebus_murinus
ENSXMAG00000011604	thoc2	99	72.940	ENSMOCG00000009946	Thoc2	98	70.820	Microtus_ochrogaster
ENSXMAG00000011604	thoc2	99	70.982	ENSMOCG00000019406	BC005561	97	69.414	Microtus_ochrogaster
ENSXMAG00000011604	thoc2	98	89.510	ENSMMOG00000016313	thoc2	97	89.510	Mola_mola
ENSXMAG00000011604	thoc2	99	72.535	ENSMODG00000014984	THOC2	97	71.108	Monodelphis_domestica
ENSXMAG00000011604	thoc2	100	86.790	ENSMALG00000019718	thoc2	99	86.790	Monopterus_albus
ENSXMAG00000011604	thoc2	99	70.697	MGP_CAROLIEiJ_G0027482	BC005561	97	69.265	Mus_caroli
ENSXMAG00000011604	thoc2	98	73.662	MGP_CAROLIEiJ_G0033023	Thoc2	97	71.841	Mus_caroli
ENSXMAG00000011604	thoc2	98	73.590	ENSMUSG00000037475	Thoc2	97	71.777	Mus_musculus
ENSXMAG00000011604	thoc2	99	70.484	ENSMUSG00000079065	BC005561	97	69.156	Mus_musculus
ENSXMAG00000011604	thoc2	99	70.178	MGP_PahariEiJ_G0017260	BC005561	97	68.879	Mus_pahari
ENSXMAG00000011604	thoc2	98	73.590	MGP_PahariEiJ_G0031569	Thoc2	97	71.777	Mus_pahari
ENSXMAG00000011604	thoc2	99	70.555	MGP_SPRETEiJ_G0028479	BC005561	97	69.221	Mus_spretus
ENSXMAG00000011604	thoc2	98	73.590	MGP_SPRETEiJ_G0034181	Thoc2	97	71.777	Mus_spretus
ENSXMAG00000011604	thoc2	99	73.093	ENSMPUG00000001357	THOC2	97	71.775	Mustela_putorius_furo
ENSXMAG00000011604	thoc2	100	71.172	ENSMLUG00000013656	-	99	71.100	Myotis_lucifugus
ENSXMAG00000011604	thoc2	99	69.811	ENSMLUG00000026072	-	97	68.406	Myotis_lucifugus
ENSXMAG00000011604	thoc2	90	70.904	ENSMLUG00000027559	-	94	69.895	Myotis_lucifugus
ENSXMAG00000011604	thoc2	99	65.805	ENSMLUG00000028256	-	97	63.473	Myotis_lucifugus
ENSXMAG00000011604	thoc2	99	71.510	ENSNGAG00000010936	BC005561	97	69.484	Nannospalax_galili
ENSXMAG00000011604	thoc2	99	73.224	ENSNGAG00000016184	Thoc2	97	70.871	Nannospalax_galili
ENSXMAG00000011604	thoc2	91	93.123	ENSNBRG00000018089	thoc2	99	88.356	Neolamprologus_brichardi
ENSXMAG00000011604	thoc2	99	69.699	ENSNLEG00000015055	THOC2	97	68.390	Nomascus_leucogenys
ENSXMAG00000011604	thoc2	82	78.613	ENSMEUG00000003533	THOC2	80	78.613	Notamacropus_eugenii
ENSXMAG00000011604	thoc2	100	71.172	ENSODEG00000002478	THOC2	97	71.639	Octodon_degus
ENSXMAG00000011604	thoc2	100	89.288	ENSONIG00000004348	thoc2	97	89.157	Oreochromis_niloticus
ENSXMAG00000011604	thoc2	100	73.222	ENSOANG00000004054	THOC2	99	72.873	Ornithorhynchus_anatinus
ENSXMAG00000011604	thoc2	99	73.295	ENSOCUG00000005996	THOC2	97	71.731	Oryctolagus_cuniculus
ENSXMAG00000011604	thoc2	100	87.623	ENSORLG00000008692	thoc2	97	87.623	Oryzias_latipes
ENSXMAG00000011604	thoc2	99	86.875	ENSORLG00020002321	thoc2	99	85.695	Oryzias_latipes_hni
ENSXMAG00000011604	thoc2	100	87.632	ENSORLG00015000665	thoc2	99	88.849	Oryzias_latipes_hsok
ENSXMAG00000011604	thoc2	99	88.303	ENSOMEG00000004006	thoc2	96	87.755	Oryzias_melastigma
ENSXMAG00000011604	thoc2	99	73.224	ENSOGAG00000000302	THOC2	97	71.759	Otolemur_garnettii
ENSXMAG00000011604	thoc2	100	71.741	ENSOARG00000013665	-	99	72.080	Ovis_aries
ENSXMAG00000011604	thoc2	84	89.062	ENSOARG00000003614	-	97	90.476	Ovis_aries
ENSXMAG00000011604	thoc2	94	76.230	ENSPPAG00000040720	THOC2	99	74.891	Pan_paniscus
ENSXMAG00000011604	thoc2	99	73.509	ENSPPRG00000023137	THOC2	97	72.015	Panthera_pardus
ENSXMAG00000011604	thoc2	99	72.443	ENSPTIG00000006983	THOC2	97	70.970	Panthera_tigris_altaica
ENSXMAG00000011604	thoc2	99	73.295	ENSPTRG00000022246	THOC2	97	72.080	Pan_troglodytes
ENSXMAG00000011604	thoc2	100	69.507	ENSPANG00000004038	THOC2	99	70.038	Papio_anubis
ENSXMAG00000011604	thoc2	99	80.101	ENSPKIG00000021719	thoc2	97	75.874	Paramormyrops_kingsleyae
ENSXMAG00000011604	thoc2	99	73.703	ENSPSIG00000015352	THOC2	96	73.079	Pelodiscus_sinensis
ENSXMAG00000011604	thoc2	99	85.725	ENSPMGG00000002688	thoc2	99	83.445	Periophthalmus_magnuspinnatus
ENSXMAG00000011604	thoc2	98	72.967	ENSPEMG00000007626	Thoc2	97	71.245	Peromyscus_maniculatus_bairdii
ENSXMAG00000011604	thoc2	99	70.910	ENSPEMG00000011125	BC005561	97	69.652	Peromyscus_maniculatus_bairdii
ENSXMAG00000011604	thoc2	99	62.784	ENSPMAG00000007219	-	98	72.518	Petromyzon_marinus
ENSXMAG00000011604	thoc2	68	81.886	ENSPCIG00000007574	THOC2	99	81.720	Phascolarctos_cinereus
ENSXMAG00000011604	thoc2	99	96.103	ENSPFOG00000019556	thoc2	97	96.103	Poecilia_formosa
ENSXMAG00000011604	thoc2	100	98.329	ENSPLAG00000005761	thoc2	99	98.329	Poecilia_latipinna
ENSXMAG00000011604	thoc2	100	98.130	ENSPMEG00000002951	thoc2	99	98.130	Poecilia_mexicana
ENSXMAG00000011604	thoc2	100	96.389	ENSPREG00000021746	thoc2	97	96.389	Poecilia_reticulata
ENSXMAG00000011604	thoc2	100	71.548	ENSPPYG00000020695	THOC2	97	72.080	Pongo_abelii
ENSXMAG00000011604	thoc2	97	64.504	ENSPCAG00000005402	THOC2	99	61.450	Procavia_capensis
ENSXMAG00000011604	thoc2	99	72.436	ENSPCOG00000001806	THOC2	96	71.807	Propithecus_coquereli
ENSXMAG00000011604	thoc2	99	72.585	ENSPVAG00000006132	THOC2	99	72.065	Pteropus_vampyrus
ENSXMAG00000011604	thoc2	98	90.748	ENSPNYG00000019622	thoc2	100	85.799	Pundamilia_nyererei
ENSXMAG00000011604	thoc2	99	76.822	ENSPNAG00000020593	thoc2	97	75.331	Pygocentrus_nattereri
ENSXMAG00000011604	thoc2	99	70.555	ENSRNOG00000042340	LOC679894	97	69.478	Rattus_norvegicus
ENSXMAG00000011604	thoc2	99	73.082	ENSRNOG00000007315	Thoc2	97	71.741	Rattus_norvegicus
ENSXMAG00000011604	thoc2	85	73.728	ENSRBIG00000044129	THOC2	98	71.293	Rhinopithecus_bieti
ENSXMAG00000011604	thoc2	100	71.548	ENSRROG00000041515	THOC2	98	71.382	Rhinopithecus_roxellana
ENSXMAG00000011604	thoc2	100	71.741	ENSSBOG00000007245	THOC2	98	71.696	Saimiri_boliviensis_boliviensis
ENSXMAG00000011604	thoc2	100	71.282	ENSSHAG00000015987	THOC2	99	71.923	Sarcophilus_harrisii
ENSXMAG00000011604	thoc2	99	80.316	ENSSFOG00015010127	thoc2	97	81.693	Scleropages_formosus
ENSXMAG00000011604	thoc2	99	80.402	ENSSFOG00015004767	THOC2	97	79.102	Scleropages_formosus
ENSXMAG00000011604	thoc2	100	89.666	ENSSMAG00000016574	thoc2	97	89.732	Scophthalmus_maximus
ENSXMAG00000011604	thoc2	100	90.778	ENSSDUG00000012815	thoc2	100	91.139	Seriola_dumerili
ENSXMAG00000011604	thoc2	100	90.517	ENSSLDG00000015816	thoc2	97	90.647	Seriola_lalandi_dorsalis
ENSXMAG00000011604	thoc2	91	75.255	ENSSARG00000005799	THOC2	100	67.955	Sorex_araneus
ENSXMAG00000011604	thoc2	99	73.047	ENSSPUG00000012889	THOC2	97	72.000	Sphenodon_punctatus
ENSXMAG00000011604	thoc2	92	93.686	ENSSPAG00000023593	thoc2	90	93.686	Stegastes_partitus
ENSXMAG00000011604	thoc2	99	73.314	ENSSSCG00000012639	THOC2	99	72.015	Sus_scrofa
ENSXMAG00000011604	thoc2	95	74.235	ENSTGUG00000003682	THOC2	99	74.813	Taeniopygia_guttata
ENSXMAG00000011604	thoc2	99	85.086	ENSTRUG00000015122	thoc2	97	84.934	Takifugu_rubripes
ENSXMAG00000011604	thoc2	99	85.102	ENSTNIG00000011794	thoc2	97	82.571	Tetraodon_nigroviridis
ENSXMAG00000011604	thoc2	60	81.818	ENSTBEG00000005854	-	60	80.165	Tupaia_belangeri
ENSXMAG00000011604	thoc2	82	72.420	ENSTBEG00000004420	-	100	68.072	Tupaia_belangeri
ENSXMAG00000011604	thoc2	90	86.676	ENSTTRG00000002762	THOC2	95	74.490	Tursiops_truncatus
ENSXMAG00000011604	thoc2	99	73.419	ENSUAMG00000008780	THOC2	99	75.302	Ursus_americanus
ENSXMAG00000011604	thoc2	95	71.721	ENSUMAG00000024014	THOC2	99	67.872	Ursus_maritimus
ENSXMAG00000011604	thoc2	100	71.612	ENSVPAG00000006247	THOC2	99	72.874	Vicugna_pacos
ENSXMAG00000011604	thoc2	99	74.034	ENSVVUG00000028282	THOC2	99	76.788	Vulpes_vulpes
ENSXMAG00000011604	thoc2	100	71.245	ENSXETG00000016195	thoc2	99	84.691	Xenopus_tropicalis
ENSXMAG00000011604	thoc2	100	99.933	ENSXCOG00000006301	thoc2	100	99.933	Xiphophorus_couchianus