EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011649 (Gene tree)
Gene ID: 102229398
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4651 bases
Position: chr1:25679134-25683784
Accession: 102229398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000011669	Mago-bind	PF09282.10	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011683	-	2273	XM_005798903	ENSXMAP00000011669	213 (aa)	XP_005798960	M4AB25

Gene Model

Click here to download ENSXMAG00000011649's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG
xma03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011649	pym1	93	61.307	ENSG00000170473	PYM1	99	61.137	Homo_sapiens
ENSXMAG00000011649	pym1	100	82.791	ENSAPOG00000023045	pym1	100	82.791	Acanthochromis_polyacanthus
ENSXMAG00000011649	pym1	92	57.949	ENSAMEG00000003091	PYM1	97	57.971	Ailuropoda_melanoleuca
ENSXMAG00000011649	pym1	100	82.028	ENSACIG00000012769	pym1	100	82.949	Amphilophus_citrinellus
ENSXMAG00000011649	pym1	100	79.907	ENSAOCG00000021358	pym1	100	83.178	Amphiprion_ocellaris
ENSXMAG00000011649	pym1	100	79.907	ENSAPEG00000022679	pym1	100	83.178	Amphiprion_percula
ENSXMAG00000011649	pym1	100	78.505	ENSATEG00000024022	pym1	100	81.776	Anabas_testudineus
ENSXMAG00000011649	pym1	93	61.463	ENSACAG00000005714	PYM1	99	61.187	Anolis_carolinensis
ENSXMAG00000011649	pym1	93	60.804	ENSANAG00000036967	PYM1	99	60.664	Aotus_nancymaae
ENSXMAG00000011649	pym1	99	64.019	ENSAMXG00000007650	pym1	98	61.728	Astyanax_mexicanus
ENSXMAG00000011649	pym1	93	60.804	ENSBTAG00000031146	PYM1	99	60.664	Bos_taurus
ENSXMAG00000011649	pym1	93	61.307	ENSCJAG00000041077	PYM1	99	61.137	Callithrix_jacchus
ENSXMAG00000011649	pym1	93	61.809	ENSCAFG00000000076	PYM1	99	61.611	Canis_familiaris
ENSXMAG00000011649	pym1	93	61.809	ENSCAFG00020026099	PYM1	99	61.611	Canis_lupus_dingo
ENSXMAG00000011649	pym1	93	60.591	ENSCHIG00000026207	PYM1	99	60.465	Capra_hircus
ENSXMAG00000011649	pym1	93	60.804	ENSTSYG00000000787	PYM1	99	60.664	Carlito_syrichta
ENSXMAG00000011649	pym1	88	57.754	ENSCAPG00000010374	PYM1	98	57.789	Cavia_aperea
ENSXMAG00000011649	pym1	93	59.296	ENSCPOG00000031546	PYM1	99	59.242	Cavia_porcellus
ENSXMAG00000011649	pym1	93	61.307	ENSCCAG00000026187	PYM1	99	61.137	Cebus_capucinus
ENSXMAG00000011649	pym1	93	61.307	ENSCATG00000018801	PYM1	99	61.137	Cercocebus_atys
ENSXMAG00000011649	pym1	93	59.296	ENSCLAG00000007964	PYM1	99	59.242	Chinchilla_lanigera
ENSXMAG00000011649	pym1	88	60.106	ENSCSAG00000005291	PYM1	97	60.000	Chlorocebus_sabaeus
ENSXMAG00000011649	pym1	98	37.327	ENSCING00000006448	-	99	39.070	Ciona_intestinalis
ENSXMAG00000011649	pym1	98	38.696	ENSCSAVG00000009805	-	94	40.435	Ciona_savignyi
ENSXMAG00000011649	pym1	93	58.794	ENSCANG00000019757	-	85	58.794	Colobus_angolensis_palliatus
ENSXMAG00000011649	pym1	93	61.307	ENSCANG00000020338	-	99	61.137	Colobus_angolensis_palliatus
ENSXMAG00000011649	pym1	93	57.789	ENSCGRG00001018051	-	99	58.685	Cricetulus_griseus_chok1gshd
ENSXMAG00000011649	pym1	88	51.832	ENSCGRG00001004231	-	96	52.632	Cricetulus_griseus_chok1gshd
ENSXMAG00000011649	pym1	93	57.789	ENSCGRG00000012495	-	99	58.685	Cricetulus_griseus_crigri
ENSXMAG00000011649	pym1	88	51.832	ENSCGRG00000018933	-	96	52.632	Cricetulus_griseus_crigri
ENSXMAG00000011649	pym1	100	70.233	ENSCSEG00000021531	pym1	100	70.233	Cynoglossus_semilaevis
ENSXMAG00000011649	pym1	99	84.286	ENSCVAG00000017360	pym1	88	84.286	Cyprinodon_variegatus
ENSXMAG00000011649	pym1	100	56.808	ENSDARG00000046024	pym1	100	54.018	Danio_rerio
ENSXMAG00000011649	pym1	93	59.296	ENSDNOG00000048414	PYM1	90	59.242	Dasypus_novemcinctus
ENSXMAG00000011649	pym1	93	61.307	ENSDORG00000029448	Pym1	99	61.137	Dipodomys_ordii
ENSXMAG00000011649	pym1	99	33.796	FBgn0034918	Pym	98	32.468	Drosophila_melanogaster
ENSXMAG00000011649	pym1	88	57.447	ENSETEG00000004461	-	98	57.000	Echinops_telfairi
ENSXMAG00000011649	pym1	87	58.602	ENSEASG00005002271	PYM1	85	58.586	Equus_asinus_asinus
ENSXMAG00000011649	pym1	93	60.804	ENSECAG00000011870	PYM1	99	60.664	Equus_caballus
ENSXMAG00000011649	pym1	100	65.728	ENSELUG00000024250	pym1	100	66.667	Esox_lucius
ENSXMAG00000011649	pym1	93	60.804	ENSFCAG00000013967	PYM1	99	60.664	Felis_catus
ENSXMAG00000011649	pym1	93	60.302	ENSFDAG00000006314	PYM1	99	60.190	Fukomys_damarensis
ENSXMAG00000011649	pym1	94	90.500	ENSFHEG00000005884	pym1	100	90.141	Fundulus_heteroclitus
ENSXMAG00000011649	pym1	93	67.677	ENSGMOG00000007239	pym1	97	67.464	Gadus_morhua
ENSXMAG00000011649	pym1	93	63.131	ENSGALG00000046169	PYM1	99	63.084	Gallus_gallus
ENSXMAG00000011649	pym1	100	97.209	ENSGAFG00000003280	pym1	100	97.209	Gambusia_affinis
ENSXMAG00000011649	pym1	100	69.953	ENSGACG00000010703	pym1	100	71.831	Gasterosteus_aculeatus
ENSXMAG00000011649	pym1	89	58.416	ENSGAGG00000001973	PYM1	89	58.333	Gopherus_agassizii
ENSXMAG00000011649	pym1	93	60.804	ENSGGOG00000043246	PYM1	99	60.664	Gorilla_gorilla
ENSXMAG00000011649	pym1	93	81.000	ENSHBUG00000012719	pym1	100	80.841	Haplochromis_burtoni
ENSXMAG00000011649	pym1	93	59.296	ENSHGLG00000017155	PYM1	99	59.242	Heterocephalus_glaber_female
ENSXMAG00000011649	pym1	93	59.296	ENSHGLG00100015341	PYM1	99	59.242	Heterocephalus_glaber_male
ENSXMAG00000011649	pym1	100	70.370	ENSHCOG00000007987	pym1	86	70.833	Hippocampus_comes
ENSXMAG00000011649	pym1	99	69.302	ENSIPUG00000005975	wibga	99	66.047	Ictalurus_punctatus
ENSXMAG00000011649	pym1	93	61.809	ENSSTOG00000014206	PYM1	99	61.611	Ictidomys_tridecemlineatus
ENSXMAG00000011649	pym1	93	57.635	ENSJJAG00000013338	Pym1	99	57.209	Jaculus_jaculus
ENSXMAG00000011649	pym1	100	79.911	ENSKMAG00000006351	pym1	100	82.143	Kryptolebias_marmoratus
ENSXMAG00000011649	pym1	100	75.234	ENSLBEG00000015707	pym1	100	78.972	Labrus_bergylta
ENSXMAG00000011649	pym1	89	61.084	ENSLACG00000014398	PYM1	94	61.751	Latimeria_chalumnae
ENSXMAG00000011649	pym1	93	62.814	ENSLAFG00000002369	PYM1	99	62.559	Loxodonta_africana
ENSXMAG00000011649	pym1	93	61.307	ENSMFAG00000003048	PYM1	99	61.137	Macaca_fascicularis
ENSXMAG00000011649	pym1	93	61.307	ENSMMUG00000011002	PYM1	99	61.137	Macaca_mulatta
ENSXMAG00000011649	pym1	93	61.307	ENSMNEG00000034677	PYM1	99	61.137	Macaca_nemestrina
ENSXMAG00000011649	pym1	93	61.307	ENSMLEG00000007971	PYM1	99	61.137	Mandrillus_leucophaeus
ENSXMAG00000011649	pym1	100	81.193	ENSMAMG00000001588	pym1	100	81.193	Mastacembelus_armatus
ENSXMAG00000011649	pym1	93	80.500	ENSMZEG00005026458	pym1	100	80.374	Maylandia_zebra
ENSXMAG00000011649	pym1	93	57.286	ENSMAUG00000007318	Pym1	99	58.216	Mesocricetus_auratus
ENSXMAG00000011649	pym1	93	58.794	ENSMICG00000032962	PYM1	99	58.768	Microcebus_murinus
ENSXMAG00000011649	pym1	93	56.281	ENSMOCG00000010208	Pym1	99	56.872	Microtus_ochrogaster
ENSXMAG00000011649	pym1	100	71.495	ENSMMOG00000009301	pym1	100	76.168	Mola_mola
ENSXMAG00000011649	pym1	100	80.282	ENSMALG00000013496	pym1	100	81.690	Monopterus_albus
ENSXMAG00000011649	pym1	93	57.286	MGP_CAROLIEiJ_G0015953	Pym1	99	57.346	Mus_caroli
ENSXMAG00000011649	pym1	93	57.789	ENSMUSG00000064030	Pym1	99	57.820	Mus_musculus
ENSXMAG00000011649	pym1	93	59.000	MGP_PahariEiJ_G0031131	Pym1	98	58.491	Mus_pahari
ENSXMAG00000011649	pym1	93	57.789	MGP_SPRETEiJ_G0016778	Pym1	99	57.820	Mus_spretus
ENSXMAG00000011649	pym1	93	61.809	ENSMPUG00000000931	PYM1	99	61.611	Mustela_putorius_furo
ENSXMAG00000011649	pym1	93	58.586	ENSMLUG00000003586	PYM1	99	58.571	Myotis_lucifugus
ENSXMAG00000011649	pym1	89	57.672	ENSNGAG00000019207	Pym1	92	57.711	Nannospalax_galili
ENSXMAG00000011649	pym1	100	80.841	ENSNBRG00000006951	pym1	100	81.308	Neolamprologus_brichardi
ENSXMAG00000011649	pym1	93	61.307	ENSNLEG00000017588	PYM1	99	61.137	Nomascus_leucogenys
ENSXMAG00000011649	pym1	90	55.440	ENSMEUG00000001017	PYM1	98	56.436	Notamacropus_eugenii
ENSXMAG00000011649	pym1	91	56.701	ENSOPRG00000007797	PYM1	96	56.796	Ochotona_princeps
ENSXMAG00000011649	pym1	93	58.794	ENSODEG00000004289	PYM1	99	58.768	Octodon_degus
ENSXMAG00000011649	pym1	93	80.296	ENSONIG00000016740	pym1	100	80.184	Oreochromis_niloticus
ENSXMAG00000011649	pym1	88	59.043	ENSOCUG00000025969	PYM1	85	59.000	Oryctolagus_cuniculus
ENSXMAG00000011649	pym1	100	79.343	ENSORLG00000030592	pym1	100	78.873	Oryzias_latipes
ENSXMAG00000011649	pym1	100	75.701	ENSORLG00020011264	pym1	100	78.505	Oryzias_latipes_hni
ENSXMAG00000011649	pym1	100	79.812	ENSORLG00015005287	pym1	100	79.343	Oryzias_latipes_hsok
ENSXMAG00000011649	pym1	100	76.018	ENSOMEG00000022250	pym1	100	76.923	Oryzias_melastigma
ENSXMAG00000011649	pym1	88	60.638	ENSOGAG00000007038	PYM1	93	60.500	Otolemur_garnettii
ENSXMAG00000011649	pym1	93	60.591	ENSOARG00000010856	PYM1	99	60.465	Ovis_aries
ENSXMAG00000011649	pym1	93	61.307	ENSPPAG00000043630	PYM1	99	61.137	Pan_paniscus
ENSXMAG00000011649	pym1	93	61.307	ENSPPRG00000013243	PYM1	99	61.137	Panthera_pardus
ENSXMAG00000011649	pym1	93	61.307	ENSPTIG00000017380	PYM1	99	61.137	Panthera_tigris_altaica
ENSXMAG00000011649	pym1	93	61.307	ENSPTRG00000005067	PYM1	99	61.137	Pan_troglodytes
ENSXMAG00000011649	pym1	93	61.809	ENSPANG00000009562	PYM1	99	61.611	Papio_anubis
ENSXMAG00000011649	pym1	99	67.136	ENSPKIG00000006301	pym1	99	66.667	Paramormyrops_kingsleyae
ENSXMAG00000011649	pym1	93	57.635	ENSPSIG00000003043	PYM1	99	56.502	Pelodiscus_sinensis
ENSXMAG00000011649	pym1	99	69.340	ENSPMGG00000023161	pym1	99	69.340	Periophthalmus_magnuspinnatus
ENSXMAG00000011649	pym1	93	59.296	ENSPEMG00000009372	Pym1	99	59.434	Peromyscus_maniculatus_bairdii
ENSXMAG00000011649	pym1	88	54.737	ENSPCIG00000024658	PYM1	92	54.634	Phascolarctos_cinereus
ENSXMAG00000011649	pym1	100	97.653	ENSPFOG00000008193	pym1	100	97.653	Poecilia_formosa
ENSXMAG00000011649	pym1	100	98.122	ENSPLAG00000009228	pym1	100	98.122	Poecilia_latipinna
ENSXMAG00000011649	pym1	100	97.653	ENSPMEG00000001505	pym1	100	97.653	Poecilia_mexicana
ENSXMAG00000011649	pym1	89	58.947	ENSPPYG00000004635	PYM1	97	59.000	Pongo_abelii
ENSXMAG00000011649	pym1	93	60.804	ENSPCOG00000019706	PYM1	99	60.664	Propithecus_coquereli
ENSXMAG00000011649	pym1	89	60.526	ENSPVAG00000011437	PYM1	97	60.396	Pteropus_vampyrus
ENSXMAG00000011649	pym1	93	78.000	ENSPNYG00000012871	pym1	100	79.907	Pundamilia_nyererei
ENSXMAG00000011649	pym1	99	64.516	ENSPNAG00000018833	pym1	99	60.369	Pygocentrus_nattereri
ENSXMAG00000011649	pym1	92	46.465	ENSRNOG00000049415	AABR07055413.1	98	42.254	Rattus_norvegicus
ENSXMAG00000011649	pym1	92	56.345	ENSRNOG00000058130	Pym1	97	56.459	Rattus_norvegicus
ENSXMAG00000011649	pym1	93	57.286	ENSRBIG00000033362	PYM1	98	57.346	Rhinopithecus_bieti
ENSXMAG00000011649	pym1	93	61.307	ENSRROG00000043620	PYM1	99	61.137	Rhinopithecus_roxellana
ENSXMAG00000011649	pym1	93	61.307	ENSSBOG00000029393	PYM1	99	61.137	Saimiri_boliviensis_boliviensis
ENSXMAG00000011649	pym1	94	57.353	ENSSHAG00000008280	PYM1	99	57.746	Sarcophilus_harrisii
ENSXMAG00000011649	pym1	100	63.426	ENSSFOG00015021475	pym1	100	65.217	Scleropages_formosus
ENSXMAG00000011649	pym1	100	76.995	ENSSMAG00000020912	pym1	100	76.526	Scophthalmus_maximus
ENSXMAG00000011649	pym1	100	81.567	ENSSDUG00000001807	pym1	100	82.949	Seriola_dumerili
ENSXMAG00000011649	pym1	100	80.822	ENSSLDG00000013730	pym1	100	82.192	Seriola_lalandi_dorsalis
ENSXMAG00000011649	pym1	88	61.170	ENSSARG00000009569	PYM1	98	61.000	Sorex_araneus
ENSXMAG00000011649	pym1	90	56.186	ENSSPUG00000015059	PYM1	97	56.250	Sphenodon_punctatus
ENSXMAG00000011649	pym1	100	79.724	ENSSPAG00000020100	pym1	100	82.569	Stegastes_partitus
ENSXMAG00000011649	pym1	93	60.302	ENSSSCG00000040825	PYM1	99	60.190	Sus_scrofa
ENSXMAG00000011649	pym1	99	74.057	ENSTRUG00000021367	pym1	100	77.830	Takifugu_rubripes
ENSXMAG00000011649	pym1	100	71.041	ENSTNIG00000012534	pym1	100	71.946	Tetraodon_nigroviridis
ENSXMAG00000011649	pym1	88	57.447	ENSTBEG00000004208	PYM1	98	57.000	Tupaia_belangeri
ENSXMAG00000011649	pym1	89	60.526	ENSTTRG00000014971	PYM1	97	60.396	Tursiops_truncatus
ENSXMAG00000011649	pym1	93	60.302	ENSUAMG00000014521	PYM1	99	60.190	Ursus_americanus
ENSXMAG00000011649	pym1	89	58.730	ENSUMAG00000016241	PYM1	85	58.794	Ursus_maritimus
ENSXMAG00000011649	pym1	93	61.307	ENSVVUG00000022749	PYM1	99	60.664	Vulpes_vulpes
ENSXMAG00000011649	pym1	93	62.814	ENSXETG00000021850	pym1	99	61.972	Xenopus_tropicalis