EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011661 (Gene tree)
Gene ID: 102229846
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 19787 bases
Position: chr1:25710117-25729903
Accession: 102229846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024071	RNase_T	PF00929.24	4.3e-20	1	1
ENSXMAP00000011695	RNase_T	PF00929.24	4.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011709	-	3984	XM_005798905	ENSXMAP00000011695	1206 (aa)	XP_005798962	M4AB51
ENSXMAT00000023206	-	3510	-	ENSXMAP00000024071	1169 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000011661's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011661	pan2	100	94.113	ENSAPOG00000022955	pan2	100	94.113	Acanthochromis_polyacanthus
ENSXMAG00000011661	pan2	100	75.414	ENSAMEG00000003824	PAN2	100	75.783	Ailuropoda_melanoleuca
ENSXMAG00000011661	pan2	99	71.092	ENSACIG00000012858	PAN2	99	70.924	Amphilophus_citrinellus
ENSXMAG00000011661	pan2	99	90.854	ENSACIG00000013079	pan2	99	91.128	Amphilophus_citrinellus
ENSXMAG00000011661	pan2	100	94.444	ENSAOCG00000022334	pan2	100	94.444	Amphiprion_ocellaris
ENSXMAG00000011661	pan2	100	93.884	ENSAPEG00000022760	pan2	100	93.884	Amphiprion_percula
ENSXMAG00000011661	pan2	99	94.816	ENSATEG00000024030	pan2	100	94.816	Anabas_testudineus
ENSXMAG00000011661	pan2	94	77.758	ENSAPLG00000005195	PAN2	100	77.758	Anas_platyrhynchos
ENSXMAG00000011661	pan2	100	76.183	ENSACAG00000007067	PAN2	100	76.694	Anolis_carolinensis
ENSXMAG00000011661	pan2	100	75.414	ENSANAG00000036468	PAN2	99	80.851	Aotus_nancymaae
ENSXMAG00000011661	pan2	99	69.700	ENSACLG00000023821	pan2	99	69.700	Astatotilapia_calliptera
ENSXMAG00000011661	pan2	100	93.140	ENSACLG00000023674	pan2	100	93.306	Astatotilapia_calliptera
ENSXMAG00000011661	pan2	99	86.543	ENSAMXG00000005418	pan2	98	86.739	Astyanax_mexicanus
ENSXMAG00000011661	pan2	100	75.414	ENSBTAG00000004376	PAN2	100	75.618	Bos_taurus
ENSXMAG00000011661	pan2	100	75.166	ENSCJAG00000011141	PAN2	100	75.371	Callithrix_jacchus
ENSXMAG00000011661	pan2	100	75.414	ENSCAFG00000000119	PAN2	100	78.974	Canis_familiaris
ENSXMAG00000011661	pan2	100	74.833	ENSCAFG00020024865	PAN2	100	74.833	Canis_lupus_dingo
ENSXMAG00000011661	pan2	100	74.815	ENSCHIG00000026935	PAN2	100	74.815	Capra_hircus
ENSXMAG00000011661	pan2	100	74.528	ENSTSYG00000006927	PAN2	99	80.585	Carlito_syrichta
ENSXMAG00000011661	pan2	100	75.391	ENSCPOG00000014918	PAN2	100	75.348	Cavia_porcellus
ENSXMAG00000011661	pan2	100	75.331	ENSCCAG00000036637	PAN2	99	80.585	Cebus_capucinus
ENSXMAG00000011661	pan2	100	75.248	ENSCATG00000045076	PAN2	99	81.283	Cercocebus_atys
ENSXMAG00000011661	pan2	100	75.309	ENSCLAG00000011700	PAN2	100	75.266	Chinchilla_lanigera
ENSXMAG00000011661	pan2	100	75.083	ENSCSAG00000005173	PAN2	100	75.206	Chlorocebus_sabaeus
ENSXMAG00000011661	pan2	100	77.012	ENSCPBG00000014029	PAN2	100	77.374	Chrysemys_picta_bellii
ENSXMAG00000011661	pan2	91	46.957	ENSCSAVG00000003833	-	99	52.442	Ciona_savignyi
ENSXMAG00000011661	pan2	100	73.532	ENSCANG00000017798	PAN2	100	73.745	Colobus_angolensis_palliatus
ENSXMAG00000011661	pan2	100	76.056	ENSCGRG00001019707	Pan2	100	76.056	Cricetulus_griseus_chok1gshd
ENSXMAG00000011661	pan2	100	75.247	ENSCGRG00000009996	Pan2	100	75.247	Cricetulus_griseus_crigri
ENSXMAG00000011661	pan2	100	88.723	ENSCSEG00000021529	pan2	100	88.723	Cynoglossus_semilaevis
ENSXMAG00000011661	pan2	100	96.434	ENSCVAG00000010197	pan2	100	96.434	Cyprinodon_variegatus
ENSXMAG00000011661	pan2	100	86.081	ENSDARG00000074675	pan2	100	85.915	Danio_rerio
ENSXMAG00000011661	pan2	100	75.622	ENSDNOG00000010940	PAN2	100	75.660	Dasypus_novemcinctus
ENSXMAG00000011661	pan2	93	42.469	FBgn0033352	PAN2	96	41.838	Drosophila_melanogaster
ENSXMAG00000011661	pan2	76	84.971	ENSETEG00000012041	PAN2	81	84.971	Echinops_telfairi
ENSXMAG00000011661	pan2	98	57.751	ENSEBUG00000002773	pan2	99	57.581	Eptatretus_burgeri
ENSXMAG00000011661	pan2	100	76.774	ENSEASG00005005235	PAN2	100	76.774	Equus_asinus_asinus
ENSXMAG00000011661	pan2	100	75.497	ENSECAG00000019814	PAN2	100	75.700	Equus_caballus
ENSXMAG00000011661	pan2	99	88.089	ENSELUG00000024604	pan2	99	88.420	Esox_lucius
ENSXMAG00000011661	pan2	100	75.414	ENSFCAG00000012021	PAN2	100	75.700	Felis_catus
ENSXMAG00000011661	pan2	99	77.219	ENSFALG00000000464	PAN2	98	77.052	Ficedula_albicollis
ENSXMAG00000011661	pan2	100	75.185	ENSFDAG00000017104	PAN2	100	75.143	Fukomys_damarensis
ENSXMAG00000011661	pan2	90	95.395	ENSFHEG00000000157	pan2	96	95.395	Fundulus_heteroclitus
ENSXMAG00000011661	pan2	100	86.315	ENSGMOG00000007249	pan2	99	86.315	Gadus_morhua
ENSXMAG00000011661	pan2	99	78.261	ENSGALG00000031512	PAN2	100	77.723	Gallus_gallus
ENSXMAG00000011661	pan2	100	99.005	ENSGAFG00000000284	pan2	100	99.005	Gambusia_affinis
ENSXMAG00000011661	pan2	100	90.535	ENSGACG00000010722	pan2	99	91.111	Gasterosteus_aculeatus
ENSXMAG00000011661	pan2	100	76.680	ENSGAGG00000007868	PAN2	100	76.796	Gopherus_agassizii
ENSXMAG00000011661	pan2	100	75.166	ENSGGOG00000009115	PAN2	99	81.283	Gorilla_gorilla
ENSXMAG00000011661	pan2	100	93.449	ENSHBUG00000005234	pan2	100	93.615	Haplochromis_burtoni
ENSXMAG00000011661	pan2	99	75.187	ENSHGLG00000005647	PAN2	98	75.187	Heterocephalus_glaber_female
ENSXMAG00000011661	pan2	99	74.938	ENSHGLG00100014057	PAN2	98	74.938	Heterocephalus_glaber_male
ENSXMAG00000011661	pan2	100	89.835	ENSHCOG00000007920	pan2	100	89.835	Hippocampus_comes
ENSXMAG00000011661	pan2	100	86.281	ENSIPUG00000011065	PAN2	100	86.281	Ictalurus_punctatus
ENSXMAG00000011661	pan2	94	75.356	ENSSTOG00000015974	PAN2	100	75.356	Ictidomys_tridecemlineatus
ENSXMAG00000011661	pan2	100	75.436	ENSJJAG00000013044	Pan2	98	75.436	Jaculus_jaculus
ENSXMAG00000011661	pan2	100	94.444	ENSKMAG00000006192	pan2	100	94.444	Kryptolebias_marmoratus
ENSXMAG00000011661	pan2	99	88.621	ENSLBEG00000015763	pan2	99	88.621	Labrus_bergylta
ENSXMAG00000011661	pan2	100	69.505	ENSLACG00000018694	PAN2	100	69.670	Latimeria_chalumnae
ENSXMAG00000011661	pan2	100	85.597	ENSLOCG00000004333	pan2	99	85.597	Lepisosteus_oculatus
ENSXMAG00000011661	pan2	100	73.064	ENSLAFG00000014873	PAN2	100	73.197	Loxodonta_africana
ENSXMAG00000011661	pan2	100	75.166	ENSMFAG00000002293	PAN2	99	81.283	Macaca_fascicularis
ENSXMAG00000011661	pan2	100	75.166	ENSMMUG00000013482	PAN2	97	81.283	Macaca_mulatta
ENSXMAG00000011661	pan2	100	75.166	ENSMNEG00000033264	PAN2	99	81.016	Macaca_nemestrina
ENSXMAG00000011661	pan2	100	75.248	ENSMLEG00000037388	PAN2	99	81.283	Mandrillus_leucophaeus
ENSXMAG00000011661	pan2	99	93.444	ENSMAMG00000001624	pan2	100	93.444	Mastacembelus_armatus
ENSXMAG00000011661	pan2	99	70.642	ENSMZEG00005026472	pan2	99	70.642	Maylandia_zebra
ENSXMAG00000011661	pan2	100	93.140	ENSMZEG00005026462	pan2	100	93.306	Maylandia_zebra
ENSXMAG00000011661	pan2	96	78.473	ENSMGAG00000001439	PAN2	99	78.473	Meleagris_gallopavo
ENSXMAG00000011661	pan2	99	76.000	ENSMAUG00000012602	Pan2	99	75.833	Mesocricetus_auratus
ENSXMAG00000011661	pan2	100	75.331	ENSMICG00000017661	PAN2	99	79.301	Microcebus_murinus
ENSXMAG00000011661	pan2	100	75.476	ENSMOCG00000007191	Pan2	100	75.476	Microtus_ochrogaster
ENSXMAG00000011661	pan2	99	92.475	ENSMMOG00000009313	pan2	97	92.475	Mola_mola
ENSXMAG00000011661	pan2	99	93.135	ENSMALG00000013377	pan2	100	93.135	Monopterus_albus
ENSXMAG00000011661	pan2	100	74.938	MGP_CAROLIEiJ_G0015930	Pan2	100	74.773	Mus_caroli
ENSXMAG00000011661	pan2	100	75.685	ENSMUSG00000005682	Pan2	100	75.519	Mus_musculus
ENSXMAG00000011661	pan2	100	75.124	MGP_PahariEiJ_G0031154	Pan2	100	74.959	Mus_pahari
ENSXMAG00000011661	pan2	100	75.851	MGP_SPRETEiJ_G0016755	Pan2	100	75.851	Mus_spretus
ENSXMAG00000011661	pan2	100	75.497	ENSMPUG00000001383	PAN2	100	75.865	Mustela_putorius_furo
ENSXMAG00000011661	pan2	100	75.166	ENSMLUG00000006737	PAN2	100	75.371	Myotis_lucifugus
ENSXMAG00000011661	pan2	100	75.911	ENSNGAG00000007930	Pan2	100	75.911	Nannospalax_galili
ENSXMAG00000011661	pan2	92	97.209	ENSNBRG00000006585	pan2	99	97.209	Neolamprologus_brichardi
ENSXMAG00000011661	pan2	100	71.157	ENSNLEG00000017499	PAN2	99	80.749	Nomascus_leucogenys
ENSXMAG00000011661	pan2	100	76.636	ENSMEUG00000010125	PAN2	100	76.752	Notamacropus_eugenii
ENSXMAG00000011661	pan2	100	74.897	ENSOPRG00000001468	PAN2	100	75.185	Ochotona_princeps
ENSXMAG00000011661	pan2	100	75.205	ENSODEG00000007203	PAN2	100	75.041	Octodon_degus
ENSXMAG00000011661	pan2	100	90.331	ENSONIG00000016732	pan2	100	90.694	Oreochromis_niloticus
ENSXMAG00000011661	pan2	81	67.807	ENSOANG00000005151	PAN2	98	67.807	Ornithorhynchus_anatinus
ENSXMAG00000011661	pan2	100	74.836	ENSOCUG00000007227	PAN2	100	75.041	Oryctolagus_cuniculus
ENSXMAG00000011661	pan2	99	92.040	ENSORLG00000015195	pan2	100	92.040	Oryzias_latipes
ENSXMAG00000011661	pan2	99	92.123	ENSORLG00020000277	pan2	100	92.123	Oryzias_latipes_hni
ENSXMAG00000011661	pan2	99	91.874	ENSORLG00015005193	pan2	100	91.874	Oryzias_latipes_hsok
ENSXMAG00000011661	pan2	99	92.206	ENSOMEG00000022087	pan2	100	92.206	Oryzias_melastigma
ENSXMAG00000011661	pan2	100	74.384	ENSOGAG00000030620	PAN2	100	74.346	Otolemur_garnettii
ENSXMAG00000011661	pan2	100	75.248	ENSOARG00000009379	PAN2	100	75.453	Ovis_aries
ENSXMAG00000011661	pan2	100	75.166	ENSPPAG00000001208	PAN2	99	81.283	Pan_paniscus
ENSXMAG00000011661	pan2	100	75.331	ENSPPRG00000021586	PAN2	100	75.618	Panthera_pardus
ENSXMAG00000011661	pan2	100	71.746	ENSPTIG00000012494	PAN2	100	71.885	Panthera_tigris_altaica
ENSXMAG00000011661	pan2	100	75.166	ENSPTRG00000052054	PAN2	99	81.283	Pan_troglodytes
ENSXMAG00000011661	pan2	92	76.434	ENSPANG00000018906	PAN2	99	81.283	Papio_anubis
ENSXMAG00000011661	pan2	100	85.702	ENSPKIG00000003973	pan2	100	85.702	Paramormyrops_kingsleyae
ENSXMAG00000011661	pan2	100	73.985	ENSPSIG00000003267	PAN2	100	74.444	Pelodiscus_sinensis
ENSXMAG00000011661	pan2	100	90.339	ENSPMGG00000023186	pan2	100	90.508	Periophthalmus_magnuspinnatus
ENSXMAG00000011661	pan2	100	75.164	ENSPEMG00000018505	Pan2	100	75.082	Peromyscus_maniculatus_bairdii
ENSXMAG00000011661	pan2	91	67.421	ENSPMAG00000004731	pan2	100	67.240	Petromyzon_marinus
ENSXMAG00000011661	pan2	100	76.763	ENSPCIG00000024643	PAN2	100	77.044	Phascolarctos_cinereus
ENSXMAG00000011661	pan2	100	98.922	ENSPFOG00000008392	pan2	100	98.922	Poecilia_formosa
ENSXMAG00000011661	pan2	100	98.839	ENSPLAG00000009198	pan2	100	98.839	Poecilia_latipinna
ENSXMAG00000011661	pan2	100	98.839	ENSPMEG00000001484	pan2	100	98.839	Poecilia_mexicana
ENSXMAG00000011661	pan2	100	99.088	ENSPREG00000000900	pan2	100	99.088	Poecilia_reticulata
ENSXMAG00000011661	pan2	90	77.710	ENSPPYG00000004656	PAN2	99	78.173	Pongo_abelii
ENSXMAG00000011661	pan2	92	76.550	ENSPCAG00000011047	PAN2	99	76.550	Procavia_capensis
ENSXMAG00000011661	pan2	100	75.414	ENSPCOG00000018263	PAN2	100	75.535	Propithecus_coquereli
ENSXMAG00000011661	pan2	94	73.085	ENSPVAG00000007591	PAN2	94	73.085	Pteropus_vampyrus
ENSXMAG00000011661	pan2	99	93.400	ENSPNYG00000002629	pan2	99	93.567	Pundamilia_nyererei
ENSXMAG00000011661	pan2	100	88.017	ENSPNAG00000027140	pan2	100	88.017	Pygocentrus_nattereri
ENSXMAG00000011661	pan2	100	75.768	ENSRNOG00000032441	Pan2	100	75.602	Rattus_norvegicus
ENSXMAG00000011661	pan2	100	75.000	ENSRBIG00000029591	PAN2	99	80.749	Rhinopithecus_bieti
ENSXMAG00000011661	pan2	100	74.917	ENSRROG00000041950	PAN2	99	80.749	Rhinopithecus_roxellana
ENSXMAG00000011661	pan2	100	75.331	ENSSBOG00000027343	PAN2	99	80.585	Saimiri_boliviensis_boliviensis
ENSXMAG00000011661	pan2	92	76.744	ENSSHAG00000000122	PAN2	99	78.040	Sarcophilus_harrisii
ENSXMAG00000011661	pan2	100	86.364	ENSSFOG00015017740	pan2	100	86.364	Scleropages_formosus
ENSXMAG00000011661	pan2	100	91.832	ENSSMAG00000020901	pan2	100	92.162	Scophthalmus_maximus
ENSXMAG00000011661	pan2	100	94.545	ENSSDUG00000001840	pan2	100	94.545	Seriola_dumerili
ENSXMAG00000011661	pan2	100	94.859	ENSSLDG00000013866	pan2	100	94.859	Seriola_lalandi_dorsalis
ENSXMAG00000011661	pan2	92	75.862	ENSSARG00000013350	PAN2	92	75.862	Sorex_araneus
ENSXMAG00000011661	pan2	92	79.084	ENSSPUG00000004270	PAN2	99	78.905	Sphenodon_punctatus
ENSXMAG00000011661	pan2	100	93.884	ENSSPAG00000019970	pan2	100	93.884	Stegastes_partitus
ENSXMAG00000011661	pan2	100	75.083	ENSSSCG00000000393	PAN2	100	75.206	Sus_scrofa
ENSXMAG00000011661	pan2	100	91.818	ENSTRUG00000014260	pan2	100	91.818	Takifugu_rubripes
ENSXMAG00000011661	pan2	100	91.488	ENSTNIG00000012537	pan2	99	91.488	Tetraodon_nigroviridis
ENSXMAG00000011661	pan2	80	74.570	ENSTTRG00000007150	PAN2	80	74.570	Tursiops_truncatus
ENSXMAG00000011661	pan2	100	76.431	ENSUAMG00000026522	PAN2	100	76.431	Ursus_americanus
ENSXMAG00000011661	pan2	100	75.021	ENSUMAG00000017020	PAN2	100	75.143	Ursus_maritimus
ENSXMAG00000011661	pan2	79	90.640	ENSVPAG00000007309	PAN2	85	90.640	Vicugna_pacos
ENSXMAG00000011661	pan2	100	75.331	ENSVVUG00000021878	PAN2	100	75.618	Vulpes_vulpes
ENSXMAG00000011661	pan2	99	74.421	ENSXETG00000009434	pan2	100	75.084	Xenopus_tropicalis
ENSXMAG00000011661	pan2	100	92.917	ENSXCOG00000014391	pan2	100	93.449	Xiphophorus_couchianus