EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011692 (Gene tree)
Gene ID: 102230894
Gene Symbol: zgc:56699
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3947 bases
Position: chr1:25786004-25789950
Accession: 102230894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039065	zf-U11-48K	PF05253.12	1.6e-19	1	2
ENSXMAP00000039065	zf-U11-48K	PF05253.12	1.6e-19	2	2
ENSXMAP00000011714	zf-U11-48K	PF05253.12	1.7e-19	1	2
ENSXMAP00000011714	zf-U11-48K	PF05253.12	1.7e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000041658	-	1367	-	ENSXMAP00000039065	179 (aa)	-	-
ENSXMAT00000011728	-	1295	XM_005798909	ENSXMAP00000011714	179 (aa)	XP_005798966	M4AB70

Gene Model

Click here to download ENSXMAG00000011692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011692	zgc:56699	80	65.734	ENSAPOG00000000311	-	80	65.734	Acanthochromis_polyacanthus
ENSXMAG00000011692	zgc:56699	99	57.865	ENSAPOG00000021951	-	100	57.865	Acanthochromis_polyacanthus
ENSXMAG00000011692	zgc:56699	98	68.571	ENSACIG00000013400	zgc:56699	97	68.571	Amphilophus_citrinellus
ENSXMAG00000011692	zgc:56699	97	60.920	ENSAOCG00000013650	-	98	60.920	Amphiprion_ocellaris
ENSXMAG00000011692	zgc:56699	97	49.425	ENSAPEG00000006689	zgc:56699	97	49.425	Amphiprion_percula
ENSXMAG00000011692	zgc:56699	98	72.571	ENSATEG00000024058	zgc:56699	97	72.571	Anabas_testudineus
ENSXMAG00000011692	zgc:56699	96	66.667	ENSACLG00000023562	zgc:56699	89	66.667	Astatotilapia_calliptera
ENSXMAG00000011692	zgc:56699	96	54.286	ENSAMXG00000038346	zgc:56699	97	54.286	Astyanax_mexicanus
ENSXMAG00000011692	zgc:56699	86	51.572	ENSAMXG00000036095	-	66	51.572	Astyanax_mexicanus
ENSXMAG00000011692	zgc:56699	97	63.584	ENSCSEG00000021520	zgc:56699	82	63.584	Cynoglossus_semilaevis
ENSXMAG00000011692	zgc:56699	88	62.420	ENSCVAG00000009972	zgc:56699	80	62.420	Cyprinodon_variegatus
ENSXMAG00000011692	zgc:56699	97	49.180	ENSDARG00000000887	zgc:56699	99	49.180	Danio_rerio
ENSXMAG00000011692	zgc:56699	92	48.214	ENSDARG00000099586	CR382383.2	94	48.214	Danio_rerio
ENSXMAG00000011692	zgc:56699	64	45.000	ENSEBUG00000005577	-	62	45.000	Eptatretus_burgeri
ENSXMAG00000011692	zgc:56699	97	58.242	ENSELUG00000003242	gtsf1	99	58.242	Esox_lucius
ENSXMAG00000011692	zgc:56699	99	77.528	ENSFHEG00000006036	zgc:56699	99	65.730	Fundulus_heteroclitus
ENSXMAG00000011692	zgc:56699	82	52.381	ENSGMOG00000007295	zgc:56699	98	52.381	Gadus_morhua
ENSXMAG00000011692	zgc:56699	76	40.426	ENSGALG00000035365	-	77	40.426	Gallus_gallus
ENSXMAG00000011692	zgc:56699	100	97.207	ENSGAFG00000020743	zgc:56699	100	97.207	Gambusia_affinis
ENSXMAG00000011692	zgc:56699	96	66.092	ENSHBUG00000005327	zgc:56699	97	66.092	Haplochromis_burtoni
ENSXMAG00000011692	zgc:56699	97	51.412	ENSHCOG00000010296	-	100	51.412	Hippocampus_comes
ENSXMAG00000011692	zgc:56699	97	49.162	ENSIPUG00000011498	zgc:56699	95	49.162	Ictalurus_punctatus
ENSXMAG00000011692	zgc:56699	96	70.760	ENSLBEG00000015981	zgc:56699	97	59.064	Labrus_bergylta
ENSXMAG00000011692	zgc:56699	79	49.645	ENSLOCG00000004469	zgc:56699	97	49.645	Lepisosteus_oculatus
ENSXMAG00000011692	zgc:56699	99	65.730	ENSMAMG00000001846	zgc:56699	99	65.730	Mastacembelus_armatus
ENSXMAG00000011692	zgc:56699	96	66.667	ENSMZEG00005026479	zgc:56699	89	66.667	Maylandia_zebra
ENSXMAG00000011692	zgc:56699	98	51.087	ENSMMOG00000017331	zgc:56699	97	51.087	Mola_mola
ENSXMAG00000011692	zgc:56699	96	66.092	ENSNBRG00000006336	zgc:56699	97	66.092	Neolamprologus_brichardi
ENSXMAG00000011692	zgc:56699	96	67.241	ENSONIG00000016720	zgc:56699	89	67.241	Oreochromis_niloticus
ENSXMAG00000011692	zgc:56699	62	37.391	ENSOANG00000030381	-	74	37.391	Ornithorhynchus_anatinus
ENSXMAG00000011692	zgc:56699	97	54.023	ENSORLG00000015258	-	97	54.023	Oryzias_latipes
ENSXMAG00000011692	zgc:56699	90	55.901	ENSORLG00000025877	-	96	55.901	Oryzias_latipes
ENSXMAG00000011692	zgc:56699	90	55.901	ENSORLG00020011013	-	96	55.901	Oryzias_latipes_hni
ENSXMAG00000011692	zgc:56699	97	53.448	ENSORLG00020010990	-	97	53.448	Oryzias_latipes_hni
ENSXMAG00000011692	zgc:56699	97	55.172	ENSORLG00015004961	zgc:56699	97	55.172	Oryzias_latipes_hsok
ENSXMAG00000011692	zgc:56699	98	55.429	ENSOMEG00000021739	-	97	55.429	Oryzias_melastigma
ENSXMAG00000011692	zgc:56699	77	56.522	ENSOMEG00000013200	-	88	56.522	Oryzias_melastigma
ENSXMAG00000011692	zgc:56699	96	58.721	ENSOMEG00000021773	-	96	58.721	Oryzias_melastigma
ENSXMAG00000011692	zgc:56699	97	50.282	ENSPKIG00000017039	zgc:56699	99	50.282	Paramormyrops_kingsleyae
ENSXMAG00000011692	zgc:56699	99	58.333	ENSPMGG00000023241	zgc:56699	98	58.333	Periophthalmus_magnuspinnatus
ENSXMAG00000011692	zgc:56699	63	43.333	ENSPMAG00000009653	-	93	43.333	Petromyzon_marinus
ENSXMAG00000011692	zgc:56699	100	93.296	ENSPFOG00000009204	zgc:56699	100	93.296	Poecilia_formosa
ENSXMAG00000011692	zgc:56699	100	81.564	ENSPLAG00000009088	zgc:56699	99	81.564	Poecilia_latipinna
ENSXMAG00000011692	zgc:56699	100	93.296	ENSPMEG00000001443	zgc:56699	100	93.296	Poecilia_mexicana
ENSXMAG00000011692	zgc:56699	100	95.531	ENSPREG00000000745	zgc:56699	100	95.531	Poecilia_reticulata
ENSXMAG00000011692	zgc:56699	96	66.667	ENSPNYG00000002811	zgc:56699	97	66.667	Pundamilia_nyererei
ENSXMAG00000011692	zgc:56699	97	55.801	ENSPNAG00000005165	zgc:56699	99	55.801	Pygocentrus_nattereri
ENSXMAG00000011692	zgc:56699	94	52.941	ENSSFOG00015021600	zgc:56699	94	52.941	Scleropages_formosus
ENSXMAG00000011692	zgc:56699	96	63.743	ENSSMAG00000020886	zgc:56699	95	63.743	Scophthalmus_maximus
ENSXMAG00000011692	zgc:56699	98	70.857	ENSSDUG00000002033	zgc:56699	97	70.857	Seriola_dumerili
ENSXMAG00000011692	zgc:56699	98	70.857	ENSSLDG00000014113	zgc:56699	97	70.857	Seriola_lalandi_dorsalis
ENSXMAG00000011692	zgc:56699	85	60.256	ENSSPAG00000010005	-	99	60.256	Stegastes_partitus
ENSXMAG00000011692	zgc:56699	97	63.793	ENSSPAG00000019854	-	98	63.793	Stegastes_partitus
ENSXMAG00000011692	zgc:56699	95	57.059	ENSTRUG00000015537	zgc:56699	95	57.059	Takifugu_rubripes
ENSXMAG00000011692	zgc:56699	80	60.839	ENSTNIG00000012515	zgc:56699	95	60.839	Tetraodon_nigroviridis
ENSXMAG00000011692	zgc:56699	100	89.385	ENSXCOG00000014400	zgc:56699	89	89.385	Xiphophorus_couchianus