EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011848 (Gene tree)
Gene ID: 102234287
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3770 bases
Position: chr16:16221854-16225623
Accession: 102234287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000011874	GTP_EFTU	PF00009.27	3.5e-55	1	1
ENSXMAP00000011874	GTP_EFTU_D2	PF03144.25	1.2e-15	1	1
ENSXMAP00000011874	GTP_EFTU_D3	PF03143.17	4.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000011890	-	1308	XM_005806997	ENSXMAP00000011874	435 (aa)	XP_005807054	M4ABN0

Gene Model

Click here to download ENSXMAG00000011848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011848	tufm	94	78.641	ENSG00000178952	TUFM	92	78.230	Homo_sapiens
ENSXMAG00000011848	tufm	96	94.976	ENSAPOG00000013385	tufm	98	92.644	Acanthochromis_polyacanthus
ENSXMAG00000011848	tufm	96	78.657	ENSAMEG00000015551	TUFM	92	78.657	Ailuropoda_melanoleuca
ENSXMAG00000011848	tufm	97	93.571	ENSACIG00000007388	tufm	97	93.571	Amphilophus_citrinellus
ENSXMAG00000011848	tufm	96	95.215	ENSAOCG00000001032	tufm	98	94.737	Amphiprion_ocellaris
ENSXMAG00000011848	tufm	96	95.215	ENSAPEG00000015751	tufm	98	94.737	Amphiprion_percula
ENSXMAG00000011848	tufm	96	93.062	ENSATEG00000002905	tufm	94	90.805	Anabas_testudineus
ENSXMAG00000011848	tufm	94	80.000	ENSACAG00000005399	TUFM	89	80.000	Anolis_carolinensis
ENSXMAG00000011848	tufm	96	76.499	ENSANAG00000022206	TUFM	92	76.499	Aotus_nancymaae
ENSXMAG00000011848	tufm	96	95.215	ENSACLG00000007403	tufm	91	92.874	Astatotilapia_calliptera
ENSXMAG00000011848	tufm	96	78.657	ENSBTAG00000019216	TUFM	92	78.657	Bos_taurus
ENSXMAG00000011848	tufm	95	56.501	WBGene00007000	tufm-1	85	56.501	Caenorhabditis_elegans
ENSXMAG00000011848	tufm	96	76.739	ENSCJAG00000006236	TUFM	92	76.739	Callithrix_jacchus
ENSXMAG00000011848	tufm	96	79.137	ENSCAFG00000017216	TUFM	92	79.137	Canis_familiaris
ENSXMAG00000011848	tufm	96	79.137	ENSCAFG00020017574	TUFM	92	79.137	Canis_lupus_dingo
ENSXMAG00000011848	tufm	96	78.897	ENSCHIG00000020583	TUFM	92	78.897	Capra_hircus
ENSXMAG00000011848	tufm	96	78.947	ENSTSYG00000026053	TUFM	92	78.947	Carlito_syrichta
ENSXMAG00000011848	tufm	96	78.417	ENSCPOG00000010534	TUFM	92	78.417	Cavia_porcellus
ENSXMAG00000011848	tufm	96	76.739	ENSCCAG00000033296	TUFM	92	76.739	Cebus_capucinus
ENSXMAG00000011848	tufm	96	77.938	ENSCATG00000035822	TUFM	92	77.938	Cercocebus_atys
ENSXMAG00000011848	tufm	96	78.417	ENSCLAG00000013969	TUFM	92	78.417	Chinchilla_lanigera
ENSXMAG00000011848	tufm	96	77.458	ENSCSAG00000006314	TUFM	92	77.458	Chlorocebus_sabaeus
ENSXMAG00000011848	tufm	96	78.947	ENSCHOG00000009077	TUFM	92	78.947	Choloepus_hoffmanni
ENSXMAG00000011848	tufm	95	81.205	ENSCPBG00000003874	TUFM	90	81.205	Chrysemys_picta_bellii
ENSXMAG00000011848	tufm	93	58.663	ENSCING00000002841	-	94	58.663	Ciona_intestinalis
ENSXMAG00000011848	tufm	92	60.000	ENSCSAVG00000009380	-	86	60.000	Ciona_savignyi
ENSXMAG00000011848	tufm	96	77.512	ENSCANG00000035829	TUFM	92	77.512	Colobus_angolensis_palliatus
ENSXMAG00000011848	tufm	96	77.218	ENSCGRG00001022949	Tufm	92	77.218	Cricetulus_griseus_chok1gshd
ENSXMAG00000011848	tufm	96	77.218	ENSCGRG00000001868	-	92	77.218	Cricetulus_griseus_crigri
ENSXMAG00000011848	tufm	97	52.459	ENSCGRG00000013193	-	94	52.459	Cricetulus_griseus_crigri
ENSXMAG00000011848	tufm	97	86.667	ENSCSEG00000013841	tufm	98	86.667	Cynoglossus_semilaevis
ENSXMAG00000011848	tufm	99	94.943	ENSCVAG00000006251	tufm	98	96.890	Cyprinodon_variegatus
ENSXMAG00000011848	tufm	99	82.069	ENSDARG00000104173	tufm	97	82.069	Danio_rerio
ENSXMAG00000011848	tufm	96	76.555	ENSDNOG00000047636	TUFM	92	76.555	Dasypus_novemcinctus
ENSXMAG00000011848	tufm	86	67.828	ENSDORG00000023544	-	89	67.828	Dipodomys_ordii
ENSXMAG00000011848	tufm	94	70.025	FBgn0024556	mEFTu1	83	70.025	Drosophila_melanogaster
ENSXMAG00000011848	tufm	82	65.915	ENSETEG00000009601	TUFM	89	65.915	Echinops_telfairi
ENSXMAG00000011848	tufm	93	71.358	ENSEBUG00000015907	tufm	66	72.099	Eptatretus_burgeri
ENSXMAG00000011848	tufm	94	79.319	ENSEASG00005015477	TUFM	91	79.319	Equus_asinus_asinus
ENSXMAG00000011848	tufm	94	79.319	ENSECAG00000019763	TUFM	91	79.319	Equus_caballus
ENSXMAG00000011848	tufm	82	77.746	ENSEEUG00000001402	TUFM	89	77.746	Erinaceus_europaeus
ENSXMAG00000011848	tufm	100	87.727	ENSELUG00000013410	tufm	90	90.714	Esox_lucius
ENSXMAG00000011848	tufm	96	78.897	ENSFCAG00000003103	TUFM	60	78.897	Felis_catus
ENSXMAG00000011848	tufm	91	74.619	ENSFDAG00000010881	TUFM	99	75.873	Fukomys_damarensis
ENSXMAG00000011848	tufm	99	86.175	ENSFHEG00000020646	tufm	96	86.175	Fundulus_heteroclitus
ENSXMAG00000011848	tufm	96	89.713	ENSGMOG00000014616	tufm	94	89.713	Gadus_morhua
ENSXMAG00000011848	tufm	99	96.288	ENSGAFG00000004682	tufm	99	97.156	Gambusia_affinis
ENSXMAG00000011848	tufm	96	91.148	ENSGACG00000012961	tufm	99	88.986	Gasterosteus_aculeatus
ENSXMAG00000011848	tufm	99	78.886	ENSGAGG00000006132	TUFM	99	81.638	Gopherus_agassizii
ENSXMAG00000011848	tufm	94	78.641	ENSGGOG00000014136	TUFM	92	78.230	Gorilla_gorilla
ENSXMAG00000011848	tufm	96	95.694	ENSHBUG00000019031	tufm	91	95.465	Haplochromis_burtoni
ENSXMAG00000011848	tufm	96	77.218	ENSHGLG00000006613	TUFM	92	77.218	Heterocephalus_glaber_female
ENSXMAG00000011848	tufm	96	73.381	ENSHGLG00100004096	TUFM	92	73.381	Heterocephalus_glaber_male
ENSXMAG00000011848	tufm	99	91.183	ENSHCOG00000014418	tufm	96	93.269	Hippocampus_comes
ENSXMAG00000011848	tufm	96	86.842	ENSIPUG00000022457	tufm	98	84.828	Ictalurus_punctatus
ENSXMAG00000011848	tufm	78	53.198	ENSIPUG00000020682	-	91	54.717	Ictalurus_punctatus
ENSXMAG00000011848	tufm	96	79.137	ENSSTOG00000011837	TUFM	92	79.137	Ictidomys_tridecemlineatus
ENSXMAG00000011848	tufm	95	78.125	ENSJJAG00000011840	Tufm	92	78.125	Jaculus_jaculus
ENSXMAG00000011848	tufm	96	91.627	ENSKMAG00000009794	tufm	94	91.627	Kryptolebias_marmoratus
ENSXMAG00000011848	tufm	96	90.887	ENSLBEG00000023735	tufm	97	90.887	Labrus_bergylta
ENSXMAG00000011848	tufm	95	84.300	ENSLACG00000008242	TUFM	91	84.300	Latimeria_chalumnae
ENSXMAG00000011848	tufm	96	74.641	ENSLAFG00000028911	TUFM	92	74.641	Loxodonta_africana
ENSXMAG00000011848	tufm	96	77.990	ENSMFAG00000033739	TUFM	92	77.990	Macaca_fascicularis
ENSXMAG00000011848	tufm	96	77.990	ENSMMUG00000003303	TUFM	92	77.990	Macaca_mulatta
ENSXMAG00000011848	tufm	96	77.990	ENSMNEG00000006031	TUFM	92	77.990	Macaca_nemestrina
ENSXMAG00000011848	tufm	96	77.938	ENSMLEG00000042133	TUFM	92	77.938	Mandrillus_leucophaeus
ENSXMAG00000011848	tufm	96	92.584	ENSMAMG00000002053	tufm	98	90.345	Mastacembelus_armatus
ENSXMAG00000011848	tufm	96	95.455	ENSMZEG00005010857	tufm	91	93.103	Maylandia_zebra
ENSXMAG00000011848	tufm	96	77.698	ENSMAUG00000010490	Tufm	92	77.698	Mesocricetus_auratus
ENSXMAG00000011848	tufm	96	77.938	ENSMICG00000007650	TUFM	92	77.938	Microcebus_murinus
ENSXMAG00000011848	tufm	96	77.698	ENSMOCG00000010051	Tufm	92	77.698	Microtus_ochrogaster
ENSXMAG00000011848	tufm	98	89.882	ENSMMOG00000012344	tufm	94	89.882	Mola_mola
ENSXMAG00000011848	tufm	96	79.137	ENSMODG00000015564	TUFM	92	79.137	Monodelphis_domestica
ENSXMAG00000011848	tufm	99	87.586	ENSMALG00000020254	tufm	98	87.586	Monopterus_albus
ENSXMAG00000011848	tufm	96	77.938	MGP_CAROLIEiJ_G0030449	-	92	77.938	Mus_caroli
ENSXMAG00000011848	tufm	96	77.938	MGP_CAROLIEiJ_G0030448	-	98	80.702	Mus_caroli
ENSXMAG00000011848	tufm	96	77.938	ENSMUSG00000073838	Tufm	98	80.702	Mus_musculus
ENSXMAG00000011848	tufm	96	77.938	MGP_PahariEiJ_G0013658	-	98	80.702	Mus_pahari
ENSXMAG00000011848	tufm	96	77.938	MGP_PahariEiJ_G0013659	-	92	77.938	Mus_pahari
ENSXMAG00000011848	tufm	96	78.177	MGP_SPRETEiJ_G0031562	-	98	81.579	Mus_spretus
ENSXMAG00000011848	tufm	96	71.806	MGP_SPRETEiJ_G0031563	-	93	71.806	Mus_spretus
ENSXMAG00000011848	tufm	83	78.846	ENSMPUG00000012816	TUFM	98	78.649	Mustela_putorius_furo
ENSXMAG00000011848	tufm	96	77.458	ENSMLUG00000012335	-	92	77.458	Myotis_lucifugus
ENSXMAG00000011848	tufm	96	77.938	ENSNGAG00000008610	Tufm	92	77.938	Nannospalax_galili
ENSXMAG00000011848	tufm	84	94.795	ENSNBRG00000006466	tufm	96	95.304	Neolamprologus_brichardi
ENSXMAG00000011848	tufm	96	72.792	ENSNLEG00000011063	TUFM	92	72.792	Nomascus_leucogenys
ENSXMAG00000011848	tufm	80	79.539	ENSMEUG00000011131	TUFM	100	79.539	Notamacropus_eugenii
ENSXMAG00000011848	tufm	96	67.386	ENSOPRG00000002318	-	91	67.386	Ochotona_princeps
ENSXMAG00000011848	tufm	96	95.694	ENSONIG00000019389	tufm	98	93.333	Oreochromis_niloticus
ENSXMAG00000011848	tufm	95	80.241	ENSOANG00000013114	TUFM	95	80.241	Ornithorhynchus_anatinus
ENSXMAG00000011848	tufm	96	78.897	ENSOCUG00000002683	TUFM	91	78.897	Oryctolagus_cuniculus
ENSXMAG00000011848	tufm	99	93.103	ENSORLG00000011497	tufm	98	93.103	Oryzias_latipes
ENSXMAG00000011848	tufm	98	94.393	ENSORLG00020013437	tufm	98	93.333	Oryzias_latipes_hni
ENSXMAG00000011848	tufm	99	93.333	ENSORLG00015003107	tufm	98	93.333	Oryzias_latipes_hsok
ENSXMAG00000011848	tufm	98	94.614	ENSOMEG00000016958	tufm	98	93.333	Oryzias_melastigma
ENSXMAG00000011848	tufm	96	78.043	ENSOGAG00000006875	TUFM	93	78.043	Otolemur_garnettii
ENSXMAG00000011848	tufm	92	79.851	ENSOARG00000002357	TUFM	97	79.851	Ovis_aries
ENSXMAG00000011848	tufm	94	78.641	ENSPPAG00000035168	TUFM	92	78.230	Pan_paniscus
ENSXMAG00000011848	tufm	96	78.897	ENSPPRG00000014248	TUFM	92	78.897	Panthera_pardus
ENSXMAG00000011848	tufm	96	78.657	ENSPTIG00000009980	TUFM	98	78.657	Panthera_tigris_altaica
ENSXMAG00000011848	tufm	94	78.641	ENSPTRG00000007939	TUFM	92	78.230	Pan_troglodytes
ENSXMAG00000011848	tufm	96	77.751	ENSPANG00000019624	TUFM	92	77.751	Papio_anubis
ENSXMAG00000011848	tufm	96	86.603	ENSPKIG00000023809	tufm	92	86.603	Paramormyrops_kingsleyae
ENSXMAG00000011848	tufm	72	78.095	ENSPSIG00000005302	TUFM	100	78.095	Pelodiscus_sinensis
ENSXMAG00000011848	tufm	97	90.499	ENSPMGG00000015631	tufm	99	90.499	Periophthalmus_magnuspinnatus
ENSXMAG00000011848	tufm	96	77.218	ENSPEMG00000012208	Tufm	92	77.218	Peromyscus_maniculatus_bairdii
ENSXMAG00000011848	tufm	96	77.938	ENSPCIG00000025208	TUFM	91	77.938	Phascolarctos_cinereus
ENSXMAG00000011848	tufm	99	91.724	ENSPFOG00000007043	tufm	98	91.724	Poecilia_formosa
ENSXMAG00000011848	tufm	97	93.365	ENSPLAG00000014372	tufm	95	93.365	Poecilia_latipinna
ENSXMAG00000011848	tufm	99	92.627	ENSPMEG00000014520	-	97	94.313	Poecilia_mexicana
ENSXMAG00000011848	tufm	99	91.954	ENSPMEG00000019508	tufm	98	91.954	Poecilia_mexicana
ENSXMAG00000011848	tufm	96	94.498	ENSPREG00000013913	tufm	94	94.498	Poecilia_reticulata
ENSXMAG00000011848	tufm	96	77.218	ENSPPYG00000007226	TUFM	92	77.218	Pongo_abelii
ENSXMAG00000011848	tufm	96	72.488	ENSPCAG00000015294	TUFM	92	72.488	Procavia_capensis
ENSXMAG00000011848	tufm	96	77.698	ENSPCOG00000012267	TUFM	92	77.698	Propithecus_coquereli
ENSXMAG00000011848	tufm	96	95.192	ENSPNYG00000008905	tufm	98	92.841	Pundamilia_nyererei
ENSXMAG00000011848	tufm	96	91.627	ENSPNAG00000018881	tufm	98	89.425	Pygocentrus_nattereri
ENSXMAG00000011848	tufm	96	77.938	ENSRNOG00000018604	Tufm	92	77.938	Rattus_norvegicus
ENSXMAG00000011848	tufm	59	77.043	ENSRBIG00000036713	-	94	77.043	Rhinopithecus_bieti
ENSXMAG00000011848	tufm	92	76.617	ENSRBIG00000042008	-	90	76.617	Rhinopithecus_bieti
ENSXMAG00000011848	tufm	96	77.990	ENSRROG00000036858	-	92	77.990	Rhinopithecus_roxellana
ENSXMAG00000011848	tufm	62	75.836	ENSRROG00000044977	-	73	75.836	Rhinopithecus_roxellana
ENSXMAG00000011848	tufm	92	61.765	YOR187W	TUF1	93	61.765	Saccharomyces_cerevisiae
ENSXMAG00000011848	tufm	96	76.739	ENSSBOG00000026542	TUFM	93	76.739	Saimiri_boliviensis_boliviensis
ENSXMAG00000011848	tufm	96	78.998	ENSSHAG00000012121	TUFM	97	78.998	Sarcophilus_harrisii
ENSXMAG00000011848	tufm	99	85.945	ENSSFOG00015013352	tufm	95	87.736	Scleropages_formosus
ENSXMAG00000011848	tufm	99	89.885	ENSSMAG00000010053	tufm	98	89.885	Scophthalmus_maximus
ENSXMAG00000011848	tufm	96	94.737	ENSSDUG00000016896	tufm	98	92.414	Seriola_dumerili
ENSXMAG00000011848	tufm	96	94.258	ENSSLDG00000006494	tufm	98	91.954	Seriola_lalandi_dorsalis
ENSXMAG00000011848	tufm	83	78.393	ENSSARG00000011228	TUFM	95	78.393	Sorex_araneus
ENSXMAG00000011848	tufm	97	70.370	ENSSPUG00000016312	TUFM	99	70.370	Sphenodon_punctatus
ENSXMAG00000011848	tufm	96	94.019	ENSSPAG00000009936	tufm	96	93.780	Stegastes_partitus
ENSXMAG00000011848	tufm	96	78.657	ENSSSCG00000007803	TUFM	92	78.657	Sus_scrofa
ENSXMAG00000011848	tufm	96	92.344	ENSTRUG00000008300	tufm	94	92.344	Takifugu_rubripes
ENSXMAG00000011848	tufm	96	75.060	ENSTBEG00000015029	TUFM	91	76.019	Tupaia_belangeri
ENSXMAG00000011848	tufm	63	77.818	ENSTTRG00000001980	-	100	77.818	Tursiops_truncatus
ENSXMAG00000011848	tufm	59	77.043	ENSTTRG00000005930	-	57	77.043	Tursiops_truncatus
ENSXMAG00000011848	tufm	96	78.657	ENSUAMG00000001471	TUFM	92	78.657	Ursus_americanus
ENSXMAG00000011848	tufm	93	79.803	ENSUMAG00000009341	TUFM	99	79.803	Ursus_maritimus
ENSXMAG00000011848	tufm	63	77.818	ENSVPAG00000009541	TUFM	100	77.818	Vicugna_pacos
ENSXMAG00000011848	tufm	96	78.897	ENSVVUG00000024170	TUFM	92	78.897	Vulpes_vulpes
ENSXMAG00000011848	tufm	86	53.247	ENSXETG00000028019	-	78	90.426	Xenopus_tropicalis