EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000011903 (Gene tree)
Gene ID: 102226769
Gene Symbol: rab6a
Alias: fb43c01|wu:fb43c01|zgc:55788
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 9887 bases
Position: chr11:21315347-21325233
Accession: 102226769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000029927	MMR_HSR1	PF01926.23	5.9e-05	1	1
ENSXMAP00000011938	MMR_HSR1	PF01926.23	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000024729	-	2736	XM_005806636	ENSXMAP00000029927	208 (aa)	XP_005806693	UPI0003B73726
ENSXMAT00000011954	-	2736	XM_005806635	ENSXMAP00000011938	208 (aa)	XP_005806692	M4ABU4

Gene Model

Click here to download ENSXMAG00000011903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000011903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000011903	rab6a	100	96.635	ENSG00000175582	RAB6A	100	97.143	Homo_sapiens
ENSXMAG00000011903	rab6a	99	90.338	ENSAPOG00000005731	rab6a	98	90.338	Acanthochromis_polyacanthus
ENSXMAG00000011903	rab6a	100	97.115	ENSAMEG00000017285	RAB6A	82	97.115	Ailuropoda_melanoleuca
ENSXMAG00000011903	rab6a	100	98.077	ENSACIG00000014605	rab6a	100	98.077	Amphilophus_citrinellus
ENSXMAG00000011903	rab6a	100	97.596	ENSAOCG00000012277	-	100	97.596	Amphiprion_ocellaris
ENSXMAG00000011903	rab6a	99	89.372	ENSATEG00000015992	rab41	98	89.372	Anabas_testudineus
ENSXMAG00000011903	rab6a	100	98.558	ENSATEG00000012459	-	100	98.558	Anabas_testudineus
ENSXMAG00000011903	rab6a	98	92.118	ENSACAG00000015304	-	96	91.262	Anolis_carolinensis
ENSXMAG00000011903	rab6a	100	97.115	ENSANAG00000036364	RAB6A	100	97.115	Aotus_nancymaae
ENSXMAG00000011903	rab6a	99	89.372	ENSACLG00000019423	rab41	98	89.372	Astatotilapia_calliptera
ENSXMAG00000011903	rab6a	99	80.193	ENSAMXG00000033216	rab41	98	80.193	Astyanax_mexicanus
ENSXMAG00000011903	rab6a	100	96.154	ENSAMXG00000032547	rab6a	100	96.154	Astyanax_mexicanus
ENSXMAG00000011903	rab6a	100	97.115	ENSBTAG00000000025	RAB6A	100	97.115	Bos_taurus
ENSXMAG00000011903	rab6a	98	76.699	WBGene00004269	rab-6.1	99	76.699	Caenorhabditis_elegans
ENSXMAG00000011903	rab6a	100	97.115	ENSCJAG00000039039	RAB6A	100	97.115	Callithrix_jacchus
ENSXMAG00000011903	rab6a	100	96.635	ENSCAFG00000028870	RAB6A	100	96.635	Canis_familiaris
ENSXMAG00000011903	rab6a	100	95.673	ENSCAFG00020002206	RAB6A	100	95.673	Canis_lupus_dingo
ENSXMAG00000011903	rab6a	100	97.115	ENSCHIG00000023957	RAB6A	100	97.115	Capra_hircus
ENSXMAG00000011903	rab6a	100	96.154	ENSTSYG00000013951	RAB6A	100	96.154	Carlito_syrichta
ENSXMAG00000011903	rab6a	100	97.115	ENSCATG00000012428	RAB6A	100	97.115	Cercocebus_atys
ENSXMAG00000011903	rab6a	100	96.635	ENSCLAG00000015536	RAB6A	100	96.635	Chinchilla_lanigera
ENSXMAG00000011903	rab6a	100	95.673	ENSCSAG00000004062	RAB6A	100	95.673	Chlorocebus_sabaeus
ENSXMAG00000011903	rab6a	100	85.577	ENSCHOG00000000992	RAB6A	100	85.577	Choloepus_hoffmanni
ENSXMAG00000011903	rab6a	100	95.673	ENSCPBG00000000041	RAB6A	100	95.673	Chrysemys_picta_bellii
ENSXMAG00000011903	rab6a	99	84.615	ENSCING00000002960	-	99	84.615	Ciona_intestinalis
ENSXMAG00000011903	rab6a	99	84.615	ENSCSAVG00000009128	-	99	84.615	Ciona_savignyi
ENSXMAG00000011903	rab6a	100	97.115	ENSCANG00000029094	RAB6A	100	97.115	Colobus_angolensis_palliatus
ENSXMAG00000011903	rab6a	100	97.115	ENSCGRG00001018153	Rab6a	100	97.115	Cricetulus_griseus_chok1gshd
ENSXMAG00000011903	rab6a	99	89.372	ENSCSEG00000004941	rab41	98	89.372	Cynoglossus_semilaevis
ENSXMAG00000011903	rab6a	99	88.406	ENSCVAG00000001618	rab41	98	88.406	Cyprinodon_variegatus
ENSXMAG00000011903	rab6a	100	99.519	ENSCVAG00000022249	rab6a	100	99.519	Cyprinodon_variegatus
ENSXMAG00000011903	rab6a	100	98.558	ENSDARG00000103714	rab6a	100	98.558	Danio_rerio
ENSXMAG00000011903	rab6a	99	89.855	ENSDARG00000029885	rab41	98	89.855	Danio_rerio
ENSXMAG00000011903	rab6a	100	96.635	ENSDNOG00000042746	RAB6A	100	96.635	Dasypus_novemcinctus
ENSXMAG00000011903	rab6a	100	96.635	ENSDORG00000027784	Rab6a	100	96.635	Dipodomys_ordii
ENSXMAG00000011903	rab6a	99	86.473	FBgn0015797	Rab6	99	86.473	Drosophila_melanogaster
ENSXMAG00000011903	rab6a	100	71.635	ENSETEG00000009412	-	100	71.635	Echinops_telfairi
ENSXMAG00000011903	rab6a	100	95.673	ENSEASG00005017944	RAB6A	100	95.673	Equus_asinus_asinus
ENSXMAG00000011903	rab6a	100	97.115	ENSECAG00000022694	-	100	97.115	Equus_caballus
ENSXMAG00000011903	rab6a	100	98.077	ENSELUG00000008876	rab6a	100	98.077	Esox_lucius
ENSXMAG00000011903	rab6a	100	97.115	ENSFCAG00000023834	RAB6A	100	97.115	Felis_catus
ENSXMAG00000011903	rab6a	100	97.115	ENSFALG00000008011	RAB6A	100	97.115	Ficedula_albicollis
ENSXMAG00000011903	rab6a	100	96.635	ENSFDAG00000010948	-	100	96.635	Fukomys_damarensis
ENSXMAG00000011903	rab6a	99	88.889	ENSGMOG00000004095	rab41	98	88.889	Gadus_morhua
ENSXMAG00000011903	rab6a	99	91.748	ENSGALG00000026278	-	98	91.748	Gallus_gallus
ENSXMAG00000011903	rab6a	100	97.596	ENSGALG00000017320	RAB6A	100	97.596	Gallus_gallus
ENSXMAG00000011903	rab6a	100	100.000	ENSGAFG00000006356	rab6a	100	100.000	Gambusia_affinis
ENSXMAG00000011903	rab6a	99	88.406	ENSGAFG00000019872	rab41	98	88.406	Gambusia_affinis
ENSXMAG00000011903	rab6a	100	98.558	ENSGACG00000020356	rab6a	100	98.558	Gasterosteus_aculeatus
ENSXMAG00000011903	rab6a	99	89.372	ENSGACG00000017153	rab41	98	89.372	Gasterosteus_aculeatus
ENSXMAG00000011903	rab6a	100	97.115	ENSGAGG00000021701	RAB6A	100	97.115	Gopherus_agassizii
ENSXMAG00000011903	rab6a	100	96.635	ENSGGOG00000010610	RAB6A	100	96.635	Gorilla_gorilla
ENSXMAG00000011903	rab6a	100	98.558	ENSHBUG00000000890	rab6a	100	98.558	Haplochromis_burtoni
ENSXMAG00000011903	rab6a	100	96.635	ENSHGLG00000008829	-	100	96.635	Heterocephalus_glaber_female
ENSXMAG00000011903	rab6a	100	95.673	ENSHGLG00100014550	-	100	95.673	Heterocephalus_glaber_male
ENSXMAG00000011903	rab6a	99	88.889	ENSHCOG00000004404	rab41	98	88.889	Hippocampus_comes
ENSXMAG00000011903	rab6a	100	97.596	ENSHCOG00000006550	-	100	97.596	Hippocampus_comes
ENSXMAG00000011903	rab6a	99	88.406	ENSIPUG00000019382	rab41	98	88.406	Ictalurus_punctatus
ENSXMAG00000011903	rab6a	100	94.231	ENSIPUG00000021740	rab6a	100	94.231	Ictalurus_punctatus
ENSXMAG00000011903	rab6a	100	97.115	ENSSTOG00000023497	RAB6A	100	97.115	Ictidomys_tridecemlineatus
ENSXMAG00000011903	rab6a	80	100.000	ENSKMAG00000013146	-	86	100.000	Kryptolebias_marmoratus
ENSXMAG00000011903	rab6a	100	97.115	ENSLBEG00000003748	rab6a	100	97.115	Labrus_bergylta
ENSXMAG00000011903	rab6a	99	91.262	ENSLACG00000013980	rab41	98	91.262	Latimeria_chalumnae
ENSXMAG00000011903	rab6a	100	97.115	ENSLACG00000005168	RAB6A	100	97.115	Latimeria_chalumnae
ENSXMAG00000011903	rab6a	99	88.406	ENSLOCG00000015191	rab41	98	88.406	Lepisosteus_oculatus
ENSXMAG00000011903	rab6a	100	97.115	ENSMFAG00000041027	RAB6A	100	97.115	Macaca_fascicularis
ENSXMAG00000011903	rab6a	100	97.115	ENSMNEG00000029216	RAB6A	100	97.115	Macaca_nemestrina
ENSXMAG00000011903	rab6a	100	97.115	ENSMLEG00000038771	RAB6A	100	97.115	Mandrillus_leucophaeus
ENSXMAG00000011903	rab6a	99	87.923	ENSMAMG00000020859	rab41	98	87.923	Mastacembelus_armatus
ENSXMAG00000011903	rab6a	100	98.558	ENSMAMG00000012488	rab6a	100	98.558	Mastacembelus_armatus
ENSXMAG00000011903	rab6a	100	98.558	ENSMZEG00005023181	rab6a	100	98.558	Maylandia_zebra
ENSXMAG00000011903	rab6a	100	97.115	ENSMICG00000031565	RAB6A	100	97.115	Microcebus_murinus
ENSXMAG00000011903	rab6a	100	97.115	ENSMOCG00000014387	Rab6a	100	97.115	Microtus_ochrogaster
ENSXMAG00000011903	rab6a	95	86.294	ENSMMOG00000001992	rab41	90	86.294	Mola_mola
ENSXMAG00000011903	rab6a	100	98.077	ENSMMOG00000016209	rab6a	100	98.077	Mola_mola
ENSXMAG00000011903	rab6a	100	95.192	ENSMODG00000007600	RAB6A	100	95.192	Monodelphis_domestica
ENSXMAG00000011903	rab6a	99	90.338	ENSMALG00000010549	rab41	98	90.338	Monopterus_albus
ENSXMAG00000011903	rab6a	100	98.077	ENSMALG00000020364	-	100	98.077	Monopterus_albus
ENSXMAG00000011903	rab6a	100	96.635	MGP_CAROLIEiJ_G0030051	Rab6a	100	96.635	Mus_caroli
ENSXMAG00000011903	rab6a	100	96.635	ENSMUSG00000030704	Rab6a	100	96.635	Mus_musculus
ENSXMAG00000011903	rab6a	100	95.192	MGP_PahariEiJ_G0013273	Rab6a	100	95.192	Mus_pahari
ENSXMAG00000011903	rab6a	100	96.635	MGP_SPRETEiJ_G0031162	Rab6a	100	96.635	Mus_spretus
ENSXMAG00000011903	rab6a	100	95.673	ENSMPUG00000009724	RAB6A	100	95.673	Mustela_putorius_furo
ENSXMAG00000011903	rab6a	100	94.712	ENSNGAG00000014566	Rab6a	100	94.712	Nannospalax_galili
ENSXMAG00000011903	rab6a	100	98.558	ENSNBRG00000016716	rab6a	100	98.558	Neolamprologus_brichardi
ENSXMAG00000011903	rab6a	99	87.923	ENSNBRG00000022702	rab41	98	87.923	Neolamprologus_brichardi
ENSXMAG00000011903	rab6a	100	97.115	ENSNLEG00000017098	RAB6A	100	97.115	Nomascus_leucogenys
ENSXMAG00000011903	rab6a	100	95.192	ENSMEUG00000010026	RAB6A	100	95.192	Notamacropus_eugenii
ENSXMAG00000011903	rab6a	91	97.354	ENSOPRG00000010355	RAB6A	100	97.354	Ochotona_princeps
ENSXMAG00000011903	rab6a	100	96.635	ENSODEG00000005942	RAB6A	100	96.635	Octodon_degus
ENSXMAG00000011903	rab6a	100	98.558	ENSONIG00000004394	rab6a	100	98.558	Oreochromis_niloticus
ENSXMAG00000011903	rab6a	100	97.115	ENSOCUG00000009297	RAB6A	100	97.115	Oryctolagus_cuniculus
ENSXMAG00000011903	rab6a	100	84.651	ENSORLG00000000937	-	100	84.651	Oryzias_latipes
ENSXMAG00000011903	rab6a	100	97.596	ENSORLG00000026197	rab6a	100	97.596	Oryzias_latipes
ENSXMAG00000011903	rab6a	100	97.596	ENSORLG00020001816	rab6a	100	97.596	Oryzias_latipes_hni
ENSXMAG00000011903	rab6a	99	87.923	ENSORLG00020000604	rab41	98	87.923	Oryzias_latipes_hni
ENSXMAG00000011903	rab6a	100	97.596	ENSORLG00015006162	rab6a	100	97.596	Oryzias_latipes_hsok
ENSXMAG00000011903	rab6a	100	97.596	ENSOMEG00000004379	-	100	97.596	Oryzias_melastigma
ENSXMAG00000011903	rab6a	100	96.154	ENSOGAG00000027043	RAB6A	100	96.154	Otolemur_garnettii
ENSXMAG00000011903	rab6a	100	95.673	ENSOARG00000007994	RAB6A	100	95.673	Ovis_aries
ENSXMAG00000011903	rab6a	100	96.635	ENSPPAG00000011436	RAB6A	100	96.635	Pan_paniscus
ENSXMAG00000011903	rab6a	100	97.115	ENSPPRG00000009543	RAB6A	100	97.115	Panthera_pardus
ENSXMAG00000011903	rab6a	100	96.635	ENSPTRG00000044137	RAB6A	100	96.635	Pan_troglodytes
ENSXMAG00000011903	rab6a	100	97.115	ENSPANG00000014356	RAB6A	100	97.115	Papio_anubis
ENSXMAG00000011903	rab6a	99	89.320	ENSPKIG00000018584	rab41	98	89.320	Paramormyrops_kingsleyae
ENSXMAG00000011903	rab6a	100	96.635	ENSPMGG00000010067	-	100	96.635	Periophthalmus_magnuspinnatus
ENSXMAG00000011903	rab6a	100	100.000	ENSPFOG00000019509	rab6a	100	100.000	Poecilia_formosa
ENSXMAG00000011903	rab6a	99	89.372	ENSPLAG00000000376	rab41	98	89.372	Poecilia_latipinna
ENSXMAG00000011903	rab6a	100	100.000	ENSPLAG00000019570	rab6a	100	100.000	Poecilia_latipinna
ENSXMAG00000011903	rab6a	99	89.372	ENSPMEG00000014170	rab41	98	89.372	Poecilia_mexicana
ENSXMAG00000011903	rab6a	100	100.000	ENSPMEG00000003369	rab6a	100	100.000	Poecilia_mexicana
ENSXMAG00000011903	rab6a	100	100.000	ENSPREG00000021505	rab6a	100	100.000	Poecilia_reticulata
ENSXMAG00000011903	rab6a	100	95.192	ENSPPYG00000003663	RAB6A	100	95.192	Pongo_abelii
ENSXMAG00000011903	rab6a	90	95.722	ENSPCAG00000006752	RAB6A	100	95.722	Procavia_capensis
ENSXMAG00000011903	rab6a	100	97.115	ENSPCOG00000021991	RAB6A	100	97.115	Propithecus_coquereli
ENSXMAG00000011903	rab6a	100	95.673	ENSPVAG00000017342	RAB6A	100	95.673	Pteropus_vampyrus
ENSXMAG00000011903	rab6a	99	88.889	ENSPNYG00000013288	rab41	98	88.889	Pundamilia_nyererei
ENSXMAG00000011903	rab6a	100	98.558	ENSPNYG00000020556	rab6a	100	98.558	Pundamilia_nyererei
ENSXMAG00000011903	rab6a	99	91.304	ENSPNAG00000021737	rab41	98	91.304	Pygocentrus_nattereri
ENSXMAG00000011903	rab6a	100	96.635	ENSRNOG00000018176	Rab6a	100	96.635	Rattus_norvegicus
ENSXMAG00000011903	rab6a	100	97.115	ENSRBIG00000030390	RAB6A	100	97.115	Rhinopithecus_bieti
ENSXMAG00000011903	rab6a	100	97.115	ENSRROG00000042103	RAB6A	100	97.115	Rhinopithecus_roxellana
ENSXMAG00000011903	rab6a	100	81.250	ENSSBOG00000028389	RAB6A	100	81.250	Saimiri_boliviensis_boliviensis
ENSXMAG00000011903	rab6a	100	98.077	ENSSFOG00015002077	rab6a	100	98.077	Scleropages_formosus
ENSXMAG00000011903	rab6a	98	90.148	ENSSFOG00015004941	rab41	96	89.320	Scleropages_formosus
ENSXMAG00000011903	rab6a	99	88.889	ENSSMAG00000015774	rab41	98	88.889	Scophthalmus_maximus
ENSXMAG00000011903	rab6a	100	97.596	ENSSMAG00000017205	-	100	97.596	Scophthalmus_maximus
ENSXMAG00000011903	rab6a	100	99.038	ENSSDUG00000013496	-	100	99.038	Seriola_dumerili
ENSXMAG00000011903	rab6a	99	88.889	ENSSLDG00000022282	rab41	98	88.889	Seriola_lalandi_dorsalis
ENSXMAG00000011903	rab6a	100	99.038	ENSSLDG00000015289	-	100	99.038	Seriola_lalandi_dorsalis
ENSXMAG00000011903	rab6a	99	91.748	ENSSPUG00000001533	-	98	91.748	Sphenodon_punctatus
ENSXMAG00000011903	rab6a	100	95.192	ENSSPUG00000017301	RAB6A	100	95.192	Sphenodon_punctatus
ENSXMAG00000011903	rab6a	99	88.889	ENSSPAG00000006001	rab41	98	88.889	Stegastes_partitus
ENSXMAG00000011903	rab6a	100	96.154	ENSSPAG00000001067	-	100	96.154	Stegastes_partitus
ENSXMAG00000011903	rab6a	100	97.115	ENSSSCG00000014828	RAB6A	100	97.115	Sus_scrofa
ENSXMAG00000011903	rab6a	100	95.673	ENSTGUG00000013470	RAB6A	100	95.673	Taeniopygia_guttata
ENSXMAG00000011903	rab6a	100	97.596	ENSTRUG00000023252	rab6a	100	97.596	Takifugu_rubripes
ENSXMAG00000011903	rab6a	99	87.923	ENSTRUG00000009223	rab41	98	87.923	Takifugu_rubripes
ENSXMAG00000011903	rab6a	100	95.192	ENSTTRG00000005374	RAB6A	100	95.192	Tursiops_truncatus
ENSXMAG00000011903	rab6a	100	90.865	ENSUMAG00000010248	RAB6A	100	90.865	Ursus_maritimus
ENSXMAG00000011903	rab6a	100	95.673	ENSVVUG00000024550	RAB6A	100	95.673	Vulpes_vulpes
ENSXMAG00000011903	rab6a	100	76.923	ENSXETG00000031363	-	100	76.923	Xenopus_tropicalis
ENSXMAG00000011903	rab6a	91	94.180	ENSXETG00000023200	rab6a	100	94.180	Xenopus_tropicalis
ENSXMAG00000011903	rab6a	100	100.000	ENSXCOG00000006259	rab6a	100	100.000	Xiphophorus_couchianus