EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000012272 (Gene tree)
Gene ID: 102227157
Gene Symbol: prpf31
Alias: zgc:66177
Full Name: pre-mRNA processing factor 31
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8079 bases
Position: chr3:18931739-18939817
Accession: 102227157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000012279	Prp31_C	PF09785.9	1.5e-43	1	1
ENSXMAP00000036565	Prp31_C	PF09785.9	1.6e-43	1	1
ENSXMAP00000036565	Nop	PF01798.18	2.9e-82	1	1
ENSXMAP00000012279	Nop	PF01798.18	3.2e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000026231	-	3492	XM_005798810	ENSXMAP00000036565	505 (aa)	XP_005798867	UPI000293AC61
ENSXMAT00000012295	-	1482	-	ENSXMAP00000012279	493 (aa)	-	M4ACT5

Gene Model

Click here to download ENSXMAG00000012272's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000012272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000012272	prpf31	94	85.498	ENSG00000105618	PRPF31	99	84.584	Homo_sapiens
ENSXMAG00000012272	prpf31	94	98.268	ENSAPOG00000020310	prpf31	99	97.046	Acanthochromis_polyacanthus
ENSXMAG00000012272	prpf31	94	84.848	ENSAMEG00000004502	PRPF31	99	84.584	Ailuropoda_melanoleuca
ENSXMAG00000012272	prpf31	100	97.426	ENSACIG00000006591	prpf31	99	97.426	Amphilophus_citrinellus
ENSXMAG00000012272	prpf31	100	96.146	ENSAOCG00000021333	prpf31	99	96.146	Amphiprion_ocellaris
ENSXMAG00000012272	prpf31	100	96.146	ENSAPEG00000008035	prpf31	99	96.146	Amphiprion_percula
ENSXMAG00000012272	prpf31	100	97.426	ENSATEG00000022705	prpf31	99	97.426	Anabas_testudineus
ENSXMAG00000012272	prpf31	96	85.624	ENSACAG00000016061	PRPF31	98	85.598	Anolis_carolinensis
ENSXMAG00000012272	prpf31	84	88.916	ENSANAG00000020822	PRPF31	98	89.538	Aotus_nancymaae
ENSXMAG00000012272	prpf31	100	97.228	ENSACLG00000021238	prpf31	99	97.228	Astatotilapia_calliptera
ENSXMAG00000012272	prpf31	100	92.698	ENSAMXG00000012329	prpf31	99	92.698	Astyanax_mexicanus
ENSXMAG00000012272	prpf31	94	85.714	ENSBTAG00000007757	PRPF31	99	84.787	Bos_taurus
ENSXMAG00000012272	prpf31	96	46.488	WBGene00022458	prp-31	99	45.437	Caenorhabditis_elegans
ENSXMAG00000012272	prpf31	94	85.498	ENSCJAG00000018525	PRPF31	99	84.584	Callithrix_jacchus
ENSXMAG00000012272	prpf31	94	85.714	ENSCAFG00000002700	PRPF31	99	84.787	Canis_familiaris
ENSXMAG00000012272	prpf31	94	85.714	ENSCAFG00020018376	PRPF31	99	84.787	Canis_lupus_dingo
ENSXMAG00000012272	prpf31	94	82.468	ENSCHIG00000021020	PRPF31	99	81.744	Capra_hircus
ENSXMAG00000012272	prpf31	94	85.714	ENSTSYG00000013569	PRPF31	99	84.787	Carlito_syrichta
ENSXMAG00000012272	prpf31	94	85.714	ENSCAPG00000013797	PRPF31	99	84.787	Cavia_aperea
ENSXMAG00000012272	prpf31	94	85.714	ENSCPOG00000011507	PRPF31	99	84.787	Cavia_porcellus
ENSXMAG00000012272	prpf31	91	78.271	ENSCCAG00000022236	-	96	78.271	Cebus_capucinus
ENSXMAG00000012272	prpf31	94	85.498	ENSCCAG00000020552	-	99	84.584	Cebus_capucinus
ENSXMAG00000012272	prpf31	94	85.498	ENSCATG00000006020	PRPF31	99	84.584	Cercocebus_atys
ENSXMAG00000012272	prpf31	94	85.714	ENSCLAG00000001700	PRPF31	99	84.787	Chinchilla_lanigera
ENSXMAG00000012272	prpf31	94	85.498	ENSCSAG00000001903	PRPF31	99	84.584	Chlorocebus_sabaeus
ENSXMAG00000012272	prpf31	88	88.073	ENSCPBG00000011670	PRPF31	90	88.073	Chrysemys_picta_bellii
ENSXMAG00000012272	prpf31	99	63.636	ENSCSAVG00000010862	-	94	63.636	Ciona_savignyi
ENSXMAG00000012272	prpf31	94	85.714	ENSCANG00000029967	PRPF31	99	84.787	Colobus_angolensis_palliatus
ENSXMAG00000012272	prpf31	94	85.498	ENSCGRG00001004873	Prpf31	99	84.584	Cricetulus_griseus_chok1gshd
ENSXMAG00000012272	prpf31	94	85.466	ENSCGRG00000012910	Prpf31	99	85.466	Cricetulus_griseus_crigri
ENSXMAG00000012272	prpf31	100	95.050	ENSCSEG00000018961	prpf31	99	94.257	Cynoglossus_semilaevis
ENSXMAG00000012272	prpf31	100	98.986	ENSCVAG00000000226	prpf31	99	98.986	Cyprinodon_variegatus
ENSXMAG00000012272	prpf31	100	91.287	ENSDARG00000095904	prpf31	99	91.287	Danio_rerio
ENSXMAG00000012272	prpf31	94	85.498	ENSDNOG00000032884	PRPF31	98	84.584	Dasypus_novemcinctus
ENSXMAG00000012272	prpf31	94	85.745	ENSDORG00000008022	Prpf31	99	84.990	Dipodomys_ordii
ENSXMAG00000012272	prpf31	99	59.839	FBgn0036487	Prp31	99	60.040	Drosophila_melanogaster
ENSXMAG00000012272	prpf31	80	90.909	ENSETEG00000017891	PRPF31	85	90.909	Echinops_telfairi
ENSXMAG00000012272	prpf31	78	55.584	ENSEBUG00000004819	prpf31	91	54.286	Eptatretus_burgeri
ENSXMAG00000012272	prpf31	94	85.714	ENSEASG00005021593	PRPF31	99	84.787	Equus_asinus_asinus
ENSXMAG00000012272	prpf31	94	85.714	ENSECAG00000020667	PRPF31	99	84.787	Equus_caballus
ENSXMAG00000012272	prpf31	76	82.228	ENSEEUG00000006128	PRPF31	98	82.228	Erinaceus_europaeus
ENSXMAG00000012272	prpf31	100	91.784	ENSELUG00000014820	prpf31	99	91.784	Esox_lucius
ENSXMAG00000012272	prpf31	94	85.714	ENSFCAG00000014037	PRPF31	99	84.787	Felis_catus
ENSXMAG00000012272	prpf31	96	85.201	ENSFDAG00000011961	PRPF31	99	84.990	Fukomys_damarensis
ENSXMAG00000012272	prpf31	84	98.324	ENSFHEG00000003642	prpf31	74	98.324	Fundulus_heteroclitus
ENSXMAG00000012272	prpf31	100	89.505	ENSGMOG00000005345	prpf31	98	89.505	Gadus_morhua
ENSXMAG00000012272	prpf31	100	99.604	ENSGAFG00000013128	prpf31	100	99.604	Gambusia_affinis
ENSXMAG00000012272	prpf31	100	94.059	ENSGACG00000011464	prpf31	99	94.059	Gasterosteus_aculeatus
ENSXMAG00000012272	prpf31	96	85.138	ENSGAGG00000000670	PRPF31	98	84.990	Gopherus_agassizii
ENSXMAG00000012272	prpf31	94	85.498	ENSGGOG00000016516	PRPF31	99	84.584	Gorilla_gorilla
ENSXMAG00000012272	prpf31	100	97.030	ENSHBUG00000005311	prpf31	99	97.030	Haplochromis_burtoni
ENSXMAG00000012272	prpf31	94	85.714	ENSHGLG00000010504	PRPF31	99	84.584	Heterocephalus_glaber_female
ENSXMAG00000012272	prpf31	94	73.810	ENSHGLG00100005911	PRPF31	98	73.225	Heterocephalus_glaber_male
ENSXMAG00000012272	prpf31	100	96.634	ENSHCOG00000020890	prpf31	99	96.634	Hippocampus_comes
ENSXMAG00000012272	prpf31	100	89.901	ENSIPUG00000000171	prpf31	99	89.901	Ictalurus_punctatus
ENSXMAG00000012272	prpf31	94	85.498	ENSSTOG00000001287	PRPF31	99	84.584	Ictidomys_tridecemlineatus
ENSXMAG00000012272	prpf31	94	85.714	ENSJJAG00000015594	Prpf31	99	84.787	Jaculus_jaculus
ENSXMAG00000012272	prpf31	100	98.020	ENSKMAG00000004967	prpf31	99	98.020	Kryptolebias_marmoratus
ENSXMAG00000012272	prpf31	100	95.644	ENSLBEG00000017225	prpf31	99	95.644	Labrus_bergylta
ENSXMAG00000012272	prpf31	94	78.205	ENSLACG00000009449	PRPF31	99	77.956	Latimeria_chalumnae
ENSXMAG00000012272	prpf31	100	83.689	ENSLOCG00000000007	prpf31	99	84.078	Lepisosteus_oculatus
ENSXMAG00000012272	prpf31	94	85.714	ENSLAFG00000004559	PRPF31	99	84.787	Loxodonta_africana
ENSXMAG00000012272	prpf31	94	85.498	ENSMFAG00000001108	PRPF31	99	84.584	Macaca_fascicularis
ENSXMAG00000012272	prpf31	94	85.498	ENSMMUG00000022297	PRPF31	99	84.584	Macaca_mulatta
ENSXMAG00000012272	prpf31	94	85.498	ENSMNEG00000035943	PRPF31	99	84.584	Macaca_nemestrina
ENSXMAG00000012272	prpf31	94	85.498	ENSMLEG00000031953	PRPF31	99	84.584	Mandrillus_leucophaeus
ENSXMAG00000012272	prpf31	100	96.436	ENSMAMG00000019433	prpf31	99	96.436	Mastacembelus_armatus
ENSXMAG00000012272	prpf31	100	97.228	ENSMZEG00005016314	prpf31	99	97.228	Maylandia_zebra
ENSXMAG00000012272	prpf31	94	85.498	ENSMAUG00000011581	Prpf31	99	84.584	Mesocricetus_auratus
ENSXMAG00000012272	prpf31	94	85.931	ENSMICG00000002355	PRPF31	99	84.990	Microcebus_murinus
ENSXMAG00000012272	prpf31	94	85.498	ENSMOCG00000002128	Prpf31	99	84.584	Microtus_ochrogaster
ENSXMAG00000012272	prpf31	100	96.238	ENSMMOG00000016451	prpf31	99	96.238	Mola_mola
ENSXMAG00000012272	prpf31	94	85.714	ENSMODG00000004098	PRPF31	99	84.584	Monodelphis_domestica
ENSXMAG00000012272	prpf31	100	94.737	ENSMALG00000009251	prpf31	99	95.142	Monopterus_albus
ENSXMAG00000012272	prpf31	94	85.498	MGP_CAROLIEiJ_G0029094	Prpf31	99	84.584	Mus_caroli
ENSXMAG00000012272	prpf31	94	85.281	ENSMUSG00000008373	Prpf31	99	84.381	Mus_musculus
ENSXMAG00000012272	prpf31	94	85.281	MGP_PahariEiJ_G0020963	Prpf31	99	84.381	Mus_pahari
ENSXMAG00000012272	prpf31	94	85.498	MGP_SPRETEiJ_G0030147	Prpf31	99	84.584	Mus_spretus
ENSXMAG00000012272	prpf31	94	85.714	ENSMPUG00000010341	PRPF31	99	84.787	Mustela_putorius_furo
ENSXMAG00000012272	prpf31	99	83.299	ENSMLUG00000016862	PRPF31	98	83.299	Myotis_lucifugus
ENSXMAG00000012272	prpf31	94	85.313	ENSNGAG00000024131	Prpf31	99	84.584	Nannospalax_galili
ENSXMAG00000012272	prpf31	100	97.030	ENSNBRG00000002354	prpf31	99	97.030	Neolamprologus_brichardi
ENSXMAG00000012272	prpf31	84	81.840	ENSNLEG00000006261	-	98	73.428	Nomascus_leucogenys
ENSXMAG00000012272	prpf31	80	77.722	ENSMEUG00000002943	PRPF31	100	76.995	Notamacropus_eugenii
ENSXMAG00000012272	prpf31	59	88.581	ENSOPRG00000000055	PRPF31	100	88.581	Ochotona_princeps
ENSXMAG00000012272	prpf31	94	85.714	ENSODEG00000000855	PRPF31	99	84.787	Octodon_degus
ENSXMAG00000012272	prpf31	100	97.030	ENSONIG00000006574	prpf31	99	97.030	Oreochromis_niloticus
ENSXMAG00000012272	prpf31	80	64.337	ENSOANG00000009386	-	98	63.549	Ornithorhynchus_anatinus
ENSXMAG00000012272	prpf31	93	78.308	ENSOCUG00000002027	PRPF31	98	77.846	Oryctolagus_cuniculus
ENSXMAG00000012272	prpf31	100	96.964	ENSORLG00000011189	prpf31	99	96.964	Oryzias_latipes
ENSXMAG00000012272	prpf31	100	96.552	ENSORLG00020007965	prpf31	99	96.552	Oryzias_latipes_hni
ENSXMAG00000012272	prpf31	100	96.238	ENSORLG00015013676	prpf31	99	96.238	Oryzias_latipes_hsok
ENSXMAG00000012272	prpf31	100	97.030	ENSOMEG00000010384	prpf31	99	97.030	Oryzias_melastigma
ENSXMAG00000012272	prpf31	61	90.667	ENSOGAG00000006936	PRPF31	98	90.667	Otolemur_garnettii
ENSXMAG00000012272	prpf31	94	73.377	ENSOARG00000003033	PRPF31	99	71.429	Ovis_aries
ENSXMAG00000012272	prpf31	94	85.498	ENSPPAG00000032209	PRPF31	99	84.584	Pan_paniscus
ENSXMAG00000012272	prpf31	94	85.714	ENSPPRG00000011686	PRPF31	99	84.787	Panthera_pardus
ENSXMAG00000012272	prpf31	94	85.714	ENSPTIG00000008467	PRPF31	99	84.787	Panthera_tigris_altaica
ENSXMAG00000012272	prpf31	94	85.498	ENSPTRG00000011443	PRPF31	99	84.584	Pan_troglodytes
ENSXMAG00000012272	prpf31	94	85.498	ENSPTRG00000045480	-	99	84.584	Pan_troglodytes
ENSXMAG00000012272	prpf31	94	85.498	ENSPANG00000025402	PRPF31	99	84.584	Papio_anubis
ENSXMAG00000012272	prpf31	100	91.700	ENSPKIG00000011812	prpf31	99	91.700	Paramormyrops_kingsleyae
ENSXMAG00000012272	prpf31	61	92.079	ENSPSIG00000003405	PRPF31	96	90.764	Pelodiscus_sinensis
ENSXMAG00000012272	prpf31	94	80.994	ENSPEMG00000011678	Prpf31	99	80.364	Peromyscus_maniculatus_bairdii
ENSXMAG00000012272	prpf31	94	85.714	ENSPCIG00000014820	PRPF31	99	84.584	Phascolarctos_cinereus
ENSXMAG00000012272	prpf31	100	98.416	ENSPFOG00000008822	prpf31	99	98.416	Poecilia_formosa
ENSXMAG00000012272	prpf31	100	98.218	ENSPLAG00000013314	prpf31	99	98.218	Poecilia_latipinna
ENSXMAG00000012272	prpf31	100	98.614	ENSPMEG00000017707	prpf31	99	98.614	Poecilia_mexicana
ENSXMAG00000012272	prpf31	100	99.604	ENSPREG00000007764	prpf31	99	99.604	Poecilia_reticulata
ENSXMAG00000012272	prpf31	94	85.498	ENSPPYG00000010371	PRPF31	99	84.584	Pongo_abelii
ENSXMAG00000012272	prpf31	94	61.472	ENSPCAG00000011872	PRPF31	99	62.069	Procavia_capensis
ENSXMAG00000012272	prpf31	94	85.498	ENSPCOG00000020393	PRPF31	99	84.584	Propithecus_coquereli
ENSXMAG00000012272	prpf31	94	85.281	ENSPVAG00000015562	PRPF31	99	84.381	Pteropus_vampyrus
ENSXMAG00000012272	prpf31	100	97.228	ENSPNYG00000002232	prpf31	99	97.228	Pundamilia_nyererei
ENSXMAG00000012272	prpf31	100	91.089	ENSPNAG00000003485	prpf31	99	91.089	Pygocentrus_nattereri
ENSXMAG00000012272	prpf31	94	85.498	ENSRNOG00000061039	Prpf31	99	84.584	Rattus_norvegicus
ENSXMAG00000012272	prpf31	94	85.714	ENSRBIG00000034963	PRPF31	99	84.787	Rhinopithecus_bieti
ENSXMAG00000012272	prpf31	94	85.714	ENSRROG00000038740	PRPF31	99	84.787	Rhinopithecus_roxellana
ENSXMAG00000012272	prpf31	68	30.641	YGR091W	-	73	30.641	Saccharomyces_cerevisiae
ENSXMAG00000012272	prpf31	94	85.498	ENSSBOG00000028915	PRPF31	99	84.584	Saimiri_boliviensis_boliviensis
ENSXMAG00000012272	prpf31	94	85.714	ENSSHAG00000009065	PRPF31	99	84.584	Sarcophilus_harrisii
ENSXMAG00000012272	prpf31	100	90.927	ENSSFOG00015000288	prpf31	99	91.124	Scleropages_formosus
ENSXMAG00000012272	prpf31	100	96.832	ENSSMAG00000013211	prpf31	99	96.832	Scophthalmus_maximus
ENSXMAG00000012272	prpf31	100	96.832	ENSSDUG00000008360	prpf31	99	96.832	Seriola_dumerili
ENSXMAG00000012272	prpf31	100	87.525	ENSSLDG00000002851	prpf31	99	87.921	Seriola_lalandi_dorsalis
ENSXMAG00000012272	prpf31	96	84.355	ENSSPUG00000008622	PRPF31	98	84.178	Sphenodon_punctatus
ENSXMAG00000012272	prpf31	100	91.634	ENSSPAG00000022547	prpf31	99	91.634	Stegastes_partitus
ENSXMAG00000012272	prpf31	94	84.848	ENSSSCG00000003263	PRPF31	99	83.976	Sus_scrofa
ENSXMAG00000012272	prpf31	100	95.446	ENSTRUG00000015769	prpf31	99	95.446	Takifugu_rubripes
ENSXMAG00000012272	prpf31	100	96.040	ENSTNIG00000008083	prpf31	99	96.040	Tetraodon_nigroviridis
ENSXMAG00000012272	prpf31	94	73.002	ENSTTRG00000006566	PRPF31	99	73.482	Tursiops_truncatus
ENSXMAG00000012272	prpf31	94	85.714	ENSUAMG00000005241	PRPF31	99	84.787	Ursus_americanus
ENSXMAG00000012272	prpf31	94	85.714	ENSUMAG00000011212	PRPF31	99	84.787	Ursus_maritimus
ENSXMAG00000012272	prpf31	94	85.714	ENSVVUG00000008257	PRPF31	99	84.787	Vulpes_vulpes
ENSXMAG00000012272	prpf31	95	85.501	ENSXETG00000010916	prpf31	99	84.787	Xenopus_tropicalis
ENSXMAG00000012272	prpf31	100	99.797	ENSXCOG00000019456	prpf31	100	99.797	Xiphophorus_couchianus