EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000012273 (Gene tree)
Gene ID: 102227415
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 14752 bases
Position: chr3:18916811-18931562
Accession: 102227415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000012302	Not3	PF04065.15	1.1e-96	1	1
ENSXMAP00000012302	NOT2_3_5	PF04153.18	4.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000012318	-	4937	XM_014468691	ENSXMAP00000012302	896 (aa)	XP_014324177	M4ACV8

Gene Model

Click here to download ENSXMAG00000012273's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000012273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000012273	cnot3a	69	87.781	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSXMAG00000012273	cnot3a	58	88.612	ENSAPOG00000015499	CNOT3	92	88.612	Acanthochromis_polyacanthus
ENSXMAG00000012273	cnot3a	58	86.159	ENSAPOG00000015002	cnot3b	76	88.809	Acanthochromis_polyacanthus
ENSXMAG00000012273	cnot3a	69	88.103	ENSAMEG00000004528	CNOT3	76	89.508	Ailuropoda_melanoleuca
ENSXMAG00000012273	cnot3a	60	92.411	ENSACIG00000003652	cnot3b	77	92.411	Amphilophus_citrinellus
ENSXMAG00000012273	cnot3a	100	85.120	ENSACIG00000006635	cnot3a	100	99.145	Amphilophus_citrinellus
ENSXMAG00000012273	cnot3a	99	84.375	ENSAOCG00000023769	cnot3a	99	85.826	Amphiprion_ocellaris
ENSXMAG00000012273	cnot3a	97	59.868	ENSAOCG00000018385	-	86	77.990	Amphiprion_ocellaris
ENSXMAG00000012273	cnot3a	97	62.281	ENSAPEG00000002640	cnot3b	78	89.333	Amphiprion_percula
ENSXMAG00000012273	cnot3a	100	84.351	ENSAPEG00000006624	cnot3a	100	87.389	Amphiprion_percula
ENSXMAG00000012273	cnot3a	100	86.374	ENSATEG00000022737	cnot3a	100	87.459	Anabas_testudineus
ENSXMAG00000012273	cnot3a	76	88.424	ENSACAG00000016085	CNOT3	89	89.508	Anolis_carolinensis
ENSXMAG00000012273	cnot3a	69	87.781	ENSANAG00000025756	CNOT3	78	89.180	Aotus_nancymaae
ENSXMAG00000012273	cnot3a	100	86.404	ENSACLG00000021136	cnot3a	100	87.816	Astatotilapia_calliptera
ENSXMAG00000012273	cnot3a	100	66.631	ENSAMXG00000009447	cnot3b	99	89.189	Astyanax_mexicanus
ENSXMAG00000012273	cnot3a	100	72.151	ENSAMXG00000012359	cnot3a	100	72.678	Astyanax_mexicanus
ENSXMAG00000012273	cnot3a	69	88.103	ENSBTAG00000014900	CNOT3	86	89.180	Bos_taurus
ENSXMAG00000012273	cnot3a	69	87.781	ENSCJAG00000001094	CNOT3	75	89.180	Callithrix_jacchus
ENSXMAG00000012273	cnot3a	72	80.453	ENSCAFG00000002699	CNOT3	75	89.180	Canis_familiaris
ENSXMAG00000012273	cnot3a	72	80.453	ENSCAFG00020018359	CNOT3	75	89.180	Canis_lupus_dingo
ENSXMAG00000012273	cnot3a	63	86.129	ENSCHIG00000015302	CNOT3	77	87.171	Capra_hircus
ENSXMAG00000012273	cnot3a	69	87.781	ENSTSYG00000008058	CNOT3	76	89.180	Carlito_syrichta
ENSXMAG00000012273	cnot3a	69	88.103	ENSCAPG00000009533	CNOT3	85	89.180	Cavia_aperea
ENSXMAG00000012273	cnot3a	69	88.103	ENSCPOG00000020741	CNOT3	85	89.180	Cavia_porcellus
ENSXMAG00000012273	cnot3a	69	87.781	ENSCCAG00000036290	CNOT3	79	89.180	Cebus_capucinus
ENSXMAG00000012273	cnot3a	69	87.781	ENSCATG00000030324	CNOT3	75	89.180	Cercocebus_atys
ENSXMAG00000012273	cnot3a	69	88.103	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSXMAG00000012273	cnot3a	69	87.781	ENSCSAG00000001900	CNOT3	75	89.180	Chlorocebus_sabaeus
ENSXMAG00000012273	cnot3a	70	87.781	ENSCPBG00000011655	CNOT3	88	89.180	Chrysemys_picta_bellii
ENSXMAG00000012273	cnot3a	64	57.547	ENSCING00000000293	-	71	68.595	Ciona_intestinalis
ENSXMAG00000012273	cnot3a	69	87.781	ENSCANG00000013408	CNOT3	75	89.180	Colobus_angolensis_palliatus
ENSXMAG00000012273	cnot3a	81	80.672	ENSCGRG00001000855	Cnot3	85	89.508	Cricetulus_griseus_chok1gshd
ENSXMAG00000012273	cnot3a	100	58.946	ENSCSEG00000016892	cnot3b	70	80.392	Cynoglossus_semilaevis
ENSXMAG00000012273	cnot3a	100	84.832	ENSCSEG00000003574	cnot3a	100	84.165	Cynoglossus_semilaevis
ENSXMAG00000012273	cnot3a	100	90.376	ENSCVAG00000008168	cnot3a	100	92.027	Cyprinodon_variegatus
ENSXMAG00000012273	cnot3a	100	64.643	ENSCVAG00000022122	cnot3b	100	63.391	Cyprinodon_variegatus
ENSXMAG00000012273	cnot3a	100	72.391	ENSDARG00000007135	cnot3a	100	71.943	Danio_rerio
ENSXMAG00000012273	cnot3a	69	87.460	ENSDNOG00000045972	CNOT3	75	88.852	Dasypus_novemcinctus
ENSXMAG00000012273	cnot3a	69	87.781	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSXMAG00000012273	cnot3a	50	67.630	FBgn0033029	Not3	50	67.630	Drosophila_melanogaster
ENSXMAG00000012273	cnot3a	52	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSXMAG00000012273	cnot3a	71	69.737	ENSEBUG00000010437	cnot3a	71	70.724	Eptatretus_burgeri
ENSXMAG00000012273	cnot3a	69	87.781	ENSEASG00005021591	CNOT3	75	89.180	Equus_asinus_asinus
ENSXMAG00000012273	cnot3a	69	87.781	ENSECAG00000023181	CNOT3	75	89.180	Equus_caballus
ENSXMAG00000012273	cnot3a	100	78.908	ENSELUG00000014743	cnot3a	100	77.897	Esox_lucius
ENSXMAG00000012273	cnot3a	76	74.937	ENSFCAG00000014042	CNOT3	76	89.180	Felis_catus
ENSXMAG00000012273	cnot3a	100	64.942	ENSFHEG00000001696	cnot3b	100	62.836	Fundulus_heteroclitus
ENSXMAG00000012273	cnot3a	100	90.677	ENSFHEG00000023166	cnot3a	96	99.573	Fundulus_heteroclitus
ENSXMAG00000012273	cnot3a	94	78.231	ENSGMOG00000005365	cnot3a	98	75.437	Gadus_morhua
ENSXMAG00000012273	cnot3a	100	98.443	ENSGAFG00000013094	cnot3a	100	98.443	Gambusia_affinis
ENSXMAG00000012273	cnot3a	100	63.868	ENSGAFG00000003459	cnot3b	100	62.983	Gambusia_affinis
ENSXMAG00000012273	cnot3a	94	80.399	ENSGACG00000011489	cnot3a	98	78.638	Gasterosteus_aculeatus
ENSXMAG00000012273	cnot3a	68	87.843	ENSGAGG00000012677	CNOT3	87	86.239	Gopherus_agassizii
ENSXMAG00000012273	cnot3a	69	87.781	ENSGGOG00000012996	CNOT3	79	89.180	Gorilla_gorilla
ENSXMAG00000012273	cnot3a	100	86.513	ENSHBUG00000005275	cnot3a	100	87.925	Haplochromis_burtoni
ENSXMAG00000012273	cnot3a	69	88.103	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSXMAG00000012273	cnot3a	60	83.908	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSXMAG00000012273	cnot3a	100	81.051	ENSHCOG00000020968	cnot3a	100	82.785	Hippocampus_comes
ENSXMAG00000012273	cnot3a	100	64.615	ENSIPUG00000009046	cnot3b	100	62.024	Ictalurus_punctatus
ENSXMAG00000012273	cnot3a	100	65.752	ENSIPUG00000000167	cnot3	100	64.744	Ictalurus_punctatus
ENSXMAG00000012273	cnot3a	69	87.781	ENSSTOG00000028248	CNOT3	85	89.180	Ictidomys_tridecemlineatus
ENSXMAG00000012273	cnot3a	69	88.103	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSXMAG00000012273	cnot3a	100	65.921	ENSKMAG00000018723	cnot3b	100	64.795	Kryptolebias_marmoratus
ENSXMAG00000012273	cnot3a	100	87.459	ENSKMAG00000004863	cnot3a	100	87.199	Kryptolebias_marmoratus
ENSXMAG00000012273	cnot3a	55	94.681	ENSLBEG00000017296	cnot3a	95	94.037	Labrus_bergylta
ENSXMAG00000012273	cnot3a	96	67.154	ENSLBEG00000018278	cnot3b	99	65.840	Labrus_bergylta
ENSXMAG00000012273	cnot3a	74	86.174	ENSLACG00000009742	CNOT3	88	87.541	Latimeria_chalumnae
ENSXMAG00000012273	cnot3a	58	90.374	ENSLOCG00000000005	cnot3b	80	90.850	Lepisosteus_oculatus
ENSXMAG00000012273	cnot3a	69	87.179	ENSLAFG00000022133	CNOT3	70	88.562	Loxodonta_africana
ENSXMAG00000012273	cnot3a	69	87.781	ENSMFAG00000040073	CNOT3	75	89.180	Macaca_fascicularis
ENSXMAG00000012273	cnot3a	61	92.437	ENSMMUG00000009698	CNOT3	100	96.078	Macaca_mulatta
ENSXMAG00000012273	cnot3a	69	87.781	ENSMNEG00000036750	CNOT3	75	89.180	Macaca_nemestrina
ENSXMAG00000012273	cnot3a	69	87.781	ENSMLEG00000036579	CNOT3	75	89.180	Mandrillus_leucophaeus
ENSXMAG00000012273	cnot3a	100	85.840	ENSMAMG00000019397	cnot3a	100	87.047	Mastacembelus_armatus
ENSXMAG00000012273	cnot3a	100	86.404	ENSMZEG00005016304	cnot3a	100	87.816	Maylandia_zebra
ENSXMAG00000012273	cnot3a	76	74.937	ENSMAUG00000014996	Cnot3	85	89.508	Mesocricetus_auratus
ENSXMAG00000012273	cnot3a	69	87.781	ENSMICG00000002370	CNOT3	75	89.180	Microcebus_murinus
ENSXMAG00000012273	cnot3a	100	84.564	ENSMMOG00000016446	cnot3a	100	85.226	Mola_mola
ENSXMAG00000012273	cnot3a	60	89.180	ENSMODG00000004066	CNOT3	73	89.180	Monodelphis_domestica
ENSXMAG00000012273	cnot3a	100	86.203	ENSMALG00000009204	cnot3a	100	85.336	Monopterus_albus
ENSXMAG00000012273	cnot3a	59	86.486	ENSMALG00000004936	cnot3b	74	86.195	Monopterus_albus
ENSXMAG00000012273	cnot3a	69	88.103	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSXMAG00000012273	cnot3a	69	88.103	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSXMAG00000012273	cnot3a	76	74.687	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSXMAG00000012273	cnot3a	69	88.103	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSXMAG00000012273	cnot3a	69	88.103	ENSMPUG00000010352	CNOT3	75	89.180	Mustela_putorius_furo
ENSXMAG00000012273	cnot3a	69	87.781	ENSNGAG00000013266	Cnot3	72	89.180	Nannospalax_galili
ENSXMAG00000012273	cnot3a	88	77.843	ENSNBRG00000003336	cnot3b	98	85.906	Neolamprologus_brichardi
ENSXMAG00000012273	cnot3a	100	84.320	ENSNBRG00000002401	cnot3a	100	85.840	Neolamprologus_brichardi
ENSXMAG00000012273	cnot3a	69	87.781	ENSNLEG00000006272	CNOT3	67	91.566	Nomascus_leucogenys
ENSXMAG00000012273	cnot3a	69	87.781	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSXMAG00000012273	cnot3a	100	85.339	ENSONIG00000006568	cnot3a	100	86.528	Oreochromis_niloticus
ENSXMAG00000012273	cnot3a	69	87.781	ENSOCUG00000007691	CNOT3	85	89.180	Oryctolagus_cuniculus
ENSXMAG00000012273	cnot3a	100	85.210	ENSORLG00000011174	cnot3a	100	86.630	Oryzias_latipes
ENSXMAG00000012273	cnot3a	100	65.946	ENSORLG00020005779	cnot3b	100	66.812	Oryzias_latipes_hni
ENSXMAG00000012273	cnot3a	100	84.692	ENSORLG00020008009	cnot3a	100	85.557	Oryzias_latipes_hni
ENSXMAG00000012273	cnot3a	100	85.414	ENSORLG00015013729	cnot3a	100	86.504	Oryzias_latipes_hsok
ENSXMAG00000012273	cnot3a	100	85.998	ENSOMEG00000010309	cnot3a	91	96.457	Oryzias_melastigma
ENSXMAG00000012273	cnot3a	100	66.060	ENSOMEG00000015557	cnot3b	100	66.268	Oryzias_melastigma
ENSXMAG00000012273	cnot3a	69	87.781	ENSOGAG00000006945	CNOT3	75	89.180	Otolemur_garnettii
ENSXMAG00000012273	cnot3a	68	64.127	ENSOARG00000002981	CNOT3	64	91.444	Ovis_aries
ENSXMAG00000012273	cnot3a	69	87.781	ENSPPAG00000002748	CNOT3	79	89.180	Pan_paniscus
ENSXMAG00000012273	cnot3a	76	74.937	ENSPPRG00000011705	CNOT3	76	89.180	Panthera_pardus
ENSXMAG00000012273	cnot3a	63	87.622	ENSPTIG00000008781	CNOT3	97	87.908	Panthera_tigris_altaica
ENSXMAG00000012273	cnot3a	69	87.781	ENSPTRG00000011444	CNOT3	79	89.180	Pan_troglodytes
ENSXMAG00000012273	cnot3a	69	87.781	ENSPTRG00000046717	-	79	89.180	Pan_troglodytes
ENSXMAG00000012273	cnot3a	69	87.781	ENSPANG00000009375	CNOT3	75	89.180	Papio_anubis
ENSXMAG00000012273	cnot3a	67	94.872	ENSPKIG00000015967	-	87	94.872	Paramormyrops_kingsleyae
ENSXMAG00000012273	cnot3a	100	65.539	ENSPKIG00000011733	CNOT3	78	56.538	Paramormyrops_kingsleyae
ENSXMAG00000012273	cnot3a	82	80.912	ENSPEMG00000024185	Cnot3	75	89.508	Peromyscus_maniculatus_bairdii
ENSXMAG00000012273	cnot3a	69	88.852	ENSPCIG00000023018	CNOT3	93	89.370	Phascolarctos_cinereus
ENSXMAG00000012273	cnot3a	100	98.113	ENSPFOG00000008693	cnot3a	96	98.113	Poecilia_formosa
ENSXMAG00000012273	cnot3a	100	64.612	ENSPFOG00000007168	cnot3b	100	62.675	Poecilia_formosa
ENSXMAG00000012273	cnot3a	100	64.612	ENSPLAG00000013457	cnot3b	100	62.675	Poecilia_latipinna
ENSXMAG00000012273	cnot3a	100	98.220	ENSPLAG00000013324	cnot3a	100	98.220	Poecilia_latipinna
ENSXMAG00000012273	cnot3a	100	98.113	ENSPMEG00000017718	cnot3a	100	98.113	Poecilia_mexicana
ENSXMAG00000012273	cnot3a	100	64.612	ENSPMEG00000010184	cnot3b	100	62.783	Poecilia_mexicana
ENSXMAG00000012273	cnot3a	99	60.432	ENSPREG00000000662	cnot3b	97	58.579	Poecilia_reticulata
ENSXMAG00000012273	cnot3a	100	95.700	ENSPREG00000007592	cnot3a	100	95.700	Poecilia_reticulata
ENSXMAG00000012273	cnot3a	69	87.460	ENSPPYG00000010372	CNOT3	75	88.852	Pongo_abelii
ENSXMAG00000012273	cnot3a	69	87.781	ENSPCOG00000017673	CNOT3	77	89.180	Propithecus_coquereli
ENSXMAG00000012273	cnot3a	69	87.460	ENSPVAG00000015564	CNOT3	70	88.525	Pteropus_vampyrus
ENSXMAG00000012273	cnot3a	100	86.404	ENSPNYG00000002282	cnot3a	100	87.816	Pundamilia_nyererei
ENSXMAG00000012273	cnot3a	100	67.888	ENSPNAG00000027459	cnot3b	100	68.018	Pygocentrus_nattereri
ENSXMAG00000012273	cnot3a	100	72.638	ENSPNAG00000017679	cnot3a	100	71.109	Pygocentrus_nattereri
ENSXMAG00000012273	cnot3a	69	88.103	ENSRNOG00000053234	Cnot3	75	89.508	Rattus_norvegicus
ENSXMAG00000012273	cnot3a	73	78.571	ENSRBIG00000031025	CNOT3	75	89.180	Rhinopithecus_bieti
ENSXMAG00000012273	cnot3a	73	78.846	ENSRROG00000003872	CNOT3	76	89.180	Rhinopithecus_roxellana
ENSXMAG00000012273	cnot3a	76	87.781	ENSSBOG00000030268	CNOT3	78	89.180	Saimiri_boliviensis_boliviensis
ENSXMAG00000012273	cnot3a	100	68.108	ENSSFOG00015000248	cnot3	100	68.886	Scleropages_formosus
ENSXMAG00000012273	cnot3a	100	69.475	ENSSFOG00015019203	-	100	69.071	Scleropages_formosus
ENSXMAG00000012273	cnot3a	100	84.875	ENSSMAG00000013235	cnot3a	100	85.730	Scophthalmus_maximus
ENSXMAG00000012273	cnot3a	100	85.886	ENSSDUG00000008181	cnot3a	100	98.718	Seriola_dumerili
ENSXMAG00000012273	cnot3a	96	85.925	ENSSLDG00000014733	cnot3a	99	88.068	Seriola_lalandi_dorsalis
ENSXMAG00000012273	cnot3a	88	73.449	ENSSPUG00000008510	CNOT3	89	89.180	Sphenodon_punctatus
ENSXMAG00000012273	cnot3a	96	86.446	ENSSPAG00000003858	cnot3a	98	88.483	Stegastes_partitus
ENSXMAG00000012273	cnot3a	100	67.476	ENSSPAG00000001429	cnot3b	100	67.343	Stegastes_partitus
ENSXMAG00000012273	cnot3a	69	87.781	ENSSSCG00000003264	CNOT3	75	89.180	Sus_scrofa
ENSXMAG00000012273	cnot3a	100	85.083	ENSTRUG00000015732	cnot3a	100	85.525	Takifugu_rubripes
ENSXMAG00000012273	cnot3a	94	80.585	ENSTNIG00000008082	cnot3a	100	81.439	Tetraodon_nigroviridis
ENSXMAG00000012273	cnot3a	69	88.103	ENSUAMG00000005234	CNOT3	76	89.508	Ursus_americanus
ENSXMAG00000012273	cnot3a	56	92.857	ENSUMAG00000010934	CNOT3	89	92.857	Ursus_maritimus
ENSXMAG00000012273	cnot3a	76	74.684	ENSVVUG00000008239	CNOT3	74	89.180	Vulpes_vulpes
ENSXMAG00000012273	cnot3a	70	85.759	ENSXETG00000003166	cnot3	88	88.387	Xenopus_tropicalis
ENSXMAG00000012273	cnot3a	96	97.806	ENSXCOG00000019460	cnot3a	100	97.806	Xiphophorus_couchianus
ENSXMAG00000012273	cnot3a	96	60.619	ENSXCOG00000018976	cnot3b	99	60.899	Xiphophorus_couchianus
ENSXMAG00000012273	cnot3a	100	64.021	ENSXMAG00000014176	cnot3b	100	63.265	Xiphophorus_maculatus