EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000012452 (Gene tree)
Gene ID: 102236196
Gene Symbol: isy1
Alias: im:7159238|rab43|wu:fc23h01|wu:fi21h07|zgc:136785
Full Name: pre-mRNA-splicing factor ISY1 homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 4982 bases
Position: chr20:5797951-5802932
Accession: 102236196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000012472	Isy1	PF06246.12	7.9e-100	1	1
ENSXMAP00000024991	Isy1	PF06246.12	4.6e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000022563	-	999	-	ENSXMAP00000024991	332 (aa)	-	-
ENSXMAT00000012488	-	837	XM_005812944	ENSXMAP00000012472	278 (aa)	XP_005813001	M4ADC8

Gene Model

Click here to download ENSXMAG00000012452's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000012452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000012452	isy1	100	76.491	ENSG00000261796	ISY1-RAB43	86	76.842	Homo_sapiens
ENSXMAG00000012452	isy1	99	76.761	ENSG00000240682	ISY1	80	97.980	Homo_sapiens
ENSXMAG00000012452	isy1	99	77.544	ENSAMEG00000015341	-	86	76.408	Ailuropoda_melanoleuca
ENSXMAG00000012452	isy1	66	92.350	ENSACIG00000014723	isy1	73	92.350	Amphilophus_citrinellus
ENSXMAG00000012452	isy1	100	87.589	ENSAOCG00000007147	isy1	100	85.106	Amphiprion_ocellaris
ENSXMAG00000012452	isy1	100	78.413	ENSAPEG00000021883	isy1	100	74.921	Amphiprion_percula
ENSXMAG00000012452	isy1	71	80.296	ENSATEG00000009521	isy1	82	81.000	Anabas_testudineus
ENSXMAG00000012452	isy1	99	68.683	ENSAPLG00000014136	-	99	66.786	Anas_platyrhynchos
ENSXMAG00000012452	isy1	91	75.391	ENSACAG00000013166	-	99	76.172	Anolis_carolinensis
ENSXMAG00000012452	isy1	99	76.761	ENSANAG00000027120	-	99	77.113	Aotus_nancymaae
ENSXMAG00000012452	isy1	100	80.142	ENSACLG00000014430	isy1	100	79.787	Astatotilapia_calliptera
ENSXMAG00000012452	isy1	100	79.649	ENSAMXG00000005423	isy1	100	78.596	Astyanax_mexicanus
ENSXMAG00000012452	isy1	100	75.704	ENSBTAG00000030915	ISY1	100	76.056	Bos_taurus
ENSXMAG00000012452	isy1	94	48.689	WBGene00009966	isy-1	99	45.693	Caenorhabditis_elegans
ENSXMAG00000012452	isy1	99	77.544	ENSCJAG00000017419	-	99	76.761	Callithrix_jacchus
ENSXMAG00000012452	isy1	99	77.544	ENSCAFG00000004333	ISY1	99	76.408	Canis_familiaris
ENSXMAG00000012452	isy1	99	77.544	ENSCAFG00020004867	-	99	76.408	Canis_lupus_dingo
ENSXMAG00000012452	isy1	100	77.544	ENSCHIG00000008237	-	100	76.056	Capra_hircus
ENSXMAG00000012452	isy1	99	78.246	ENSTSYG00000013897	-	99	77.465	Carlito_syrichta
ENSXMAG00000012452	isy1	97	65.809	ENSCAPG00000016359	-	99	64.207	Cavia_aperea
ENSXMAG00000012452	isy1	99	77.544	ENSCPOG00000014735	-	99	76.408	Cavia_porcellus
ENSXMAG00000012452	isy1	99	77.544	ENSCCAG00000028517	-	99	76.761	Cebus_capucinus
ENSXMAG00000012452	isy1	99	77.895	ENSCATG00000030672	-	99	77.113	Cercocebus_atys
ENSXMAG00000012452	isy1	99	77.273	ENSCLAG00000007518	-	99	76.140	Chinchilla_lanigera
ENSXMAG00000012452	isy1	99	77.895	ENSCSAG00000008798	-	99	77.113	Chlorocebus_sabaeus
ENSXMAG00000012452	isy1	100	77.660	ENSCPBG00000026346	-	100	78.369	Chrysemys_picta_bellii
ENSXMAG00000012452	isy1	99	65.591	ENSCING00000000716	-	99	65.233	Ciona_intestinalis
ENSXMAG00000012452	isy1	100	65.018	ENSCSAVG00000008992	-	100	62.898	Ciona_savignyi
ENSXMAG00000012452	isy1	99	77.895	ENSCANG00000037761	-	99	77.113	Colobus_angolensis_palliatus
ENSXMAG00000012452	isy1	99	77.544	ENSCGRG00001003415	Isy1	99	76.408	Cricetulus_griseus_chok1gshd
ENSXMAG00000012452	isy1	99	77.544	ENSCGRG00000011641	Isy1	99	76.408	Cricetulus_griseus_crigri
ENSXMAG00000012452	isy1	88	78.715	ENSCSEG00000020382	isy1	95	79.518	Cynoglossus_semilaevis
ENSXMAG00000012452	isy1	100	90.357	ENSCVAG00000000650	isy1	100	89.286	Cyprinodon_variegatus
ENSXMAG00000012452	isy1	100	80.351	ENSDARG00000063466	isy1	100	78.947	Danio_rerio
ENSXMAG00000012452	isy1	99	76.923	ENSDNOG00000002763	-	99	75.789	Dasypus_novemcinctus
ENSXMAG00000012452	isy1	96	76.895	ENSDORG00000006886	Isy1	99	75.725	Dipodomys_ordii
ENSXMAG00000012452	isy1	95	62.362	FBgn0037550	CG9667	99	61.765	Drosophila_melanogaster
ENSXMAG00000012452	isy1	96	76.642	ENSETEG00000017009	-	100	76.642	Echinops_telfairi
ENSXMAG00000012452	isy1	96	73.646	ENSEASG00005015810	-	97	72.464	Equus_asinus_asinus
ENSXMAG00000012452	isy1	94	77.695	ENSECAG00000013768	-	88	76.493	Equus_caballus
ENSXMAG00000012452	isy1	100	78.322	ENSELUG00000000489	isy1	100	75.874	Esox_lucius
ENSXMAG00000012452	isy1	99	77.544	ENSFCAG00000008664	-	99	76.408	Felis_catus
ENSXMAG00000012452	isy1	100	79.928	ENSFALG00000000023	-	100	79.928	Ficedula_albicollis
ENSXMAG00000012452	isy1	100	73.477	ENSFALG00000014998	-	100	73.477	Ficedula_albicollis
ENSXMAG00000012452	isy1	96	76.259	ENSFDAG00000012661	-	94	76.173	Fukomys_damarensis
ENSXMAG00000012452	isy1	100	88.612	ENSFHEG00000006776	isy1	100	90.036	Fundulus_heteroclitus
ENSXMAG00000012452	isy1	77	94.286	ENSGMOG00000005635	isy1	74	94.286	Gadus_morhua
ENSXMAG00000012452	isy1	100	79.004	ENSGALG00000005012	-	100	78.648	Gallus_gallus
ENSXMAG00000012452	isy1	98	95.290	ENSGAFG00000019550	isy1	100	95.290	Gambusia_affinis
ENSXMAG00000012452	isy1	100	87.234	ENSGACG00000003342	isy1	100	85.816	Gasterosteus_aculeatus
ENSXMAG00000012452	isy1	97	78.022	ENSGAGG00000021274	-	97	76.863	Gopherus_agassizii
ENSXMAG00000012452	isy1	99	76.761	ENSGGOG00000038733	ISY1	99	77.113	Gorilla_gorilla
ENSXMAG00000012452	isy1	99	78.169	ENSHGLG00000002576	-	99	77.032	Heterocephalus_glaber_female
ENSXMAG00000012452	isy1	98	60.993	ENSHGLG00000017889	-	79	60.142	Heterocephalus_glaber_female
ENSXMAG00000012452	isy1	99	76.140	ENSHGLG00100004254	-	99	75.000	Heterocephalus_glaber_male
ENSXMAG00000012452	isy1	98	60.993	ENSHGLG00100005531	-	79	60.142	Heterocephalus_glaber_male
ENSXMAG00000012452	isy1	99	79.505	ENSHCOG00000014775	isy1	99	78.799	Hippocampus_comes
ENSXMAG00000012452	isy1	100	78.246	ENSIPUG00000011379	Isy1	100	78.169	Ictalurus_punctatus
ENSXMAG00000012452	isy1	99	77.544	ENSSTOG00000024769	-	99	76.761	Ictidomys_tridecemlineatus
ENSXMAG00000012452	isy1	77	72.523	ENSJJAG00000009635	Isy1	95	71.041	Jaculus_jaculus
ENSXMAG00000012452	isy1	100	79.859	ENSLACG00000004490	isy1	100	78.369	Latimeria_chalumnae
ENSXMAG00000012452	isy1	100	79.298	ENSLOCG00000013988	isy1	100	79.649	Lepisosteus_oculatus
ENSXMAG00000012452	isy1	99	66.431	ENSLAFG00000004015	-	99	66.784	Loxodonta_africana
ENSXMAG00000012452	isy1	99	77.895	ENSMFAG00000037074	-	99	77.113	Macaca_fascicularis
ENSXMAG00000012452	isy1	100	77.622	ENSMMUG00000011580	ISY1-RAB43	99	77.113	Macaca_mulatta
ENSXMAG00000012452	isy1	99	70.423	ENSMNEG00000043206	ISY1	99	69.611	Macaca_nemestrina
ENSXMAG00000012452	isy1	99	77.895	ENSMLEG00000033836	-	99	77.113	Mandrillus_leucophaeus
ENSXMAG00000012452	isy1	100	86.572	ENSMAMG00000009501	isy1	100	86.572	Mastacembelus_armatus
ENSXMAG00000012452	isy1	100	87.279	ENSMZEG00005012021	isy1	100	87.986	Maylandia_zebra
ENSXMAG00000012452	isy1	99	78.014	ENSMGAG00000005181	-	99	78.014	Meleagris_gallopavo
ENSXMAG00000012452	isy1	99	77.544	ENSMAUG00000008793	Isy1	99	76.408	Mesocricetus_auratus
ENSXMAG00000012452	isy1	96	76.449	ENSMICG00000037547	-	99	74.909	Microcebus_murinus
ENSXMAG00000012452	isy1	99	77.895	ENSMOCG00000000472	Isy1	99	76.761	Microtus_ochrogaster
ENSXMAG00000012452	isy1	99	80.000	ENSMMOG00000017810	isy1	99	78.621	Mola_mola
ENSXMAG00000012452	isy1	100	78.799	ENSMODG00000008387	-	100	77.660	Monodelphis_domestica
ENSXMAG00000012452	isy1	100	88.380	ENSMALG00000020650	isy1	100	86.620	Monopterus_albus
ENSXMAG00000012452	isy1	99	77.895	MGP_CAROLIEiJ_G0028619	Isy1	98	95.918	Mus_caroli
ENSXMAG00000012452	isy1	99	77.895	ENSMUSG00000030056	Isy1	98	95.918	Mus_musculus
ENSXMAG00000012452	isy1	99	65.292	MGP_PahariEiJ_G0022357	Isy1	100	67.550	Mus_pahari
ENSXMAG00000012452	isy1	99	77.895	MGP_SPRETEiJ_G0029631	Isy1	98	95.918	Mus_spretus
ENSXMAG00000012452	isy1	99	69.123	ENSMPUG00000017307	-	95	67.958	Mustela_putorius_furo
ENSXMAG00000012452	isy1	99	72.085	ENSMLUG00000011804	-	99	72.438	Myotis_lucifugus
ENSXMAG00000012452	isy1	99	77.895	ENSNGAG00000015207	Isy1	99	76.761	Nannospalax_galili
ENSXMAG00000012452	isy1	65	91.160	ENSNBRG00000006974	isy1	76	91.160	Neolamprologus_brichardi
ENSXMAG00000012452	isy1	99	77.895	ENSNLEG00000028747	ISY1	99	77.113	Nomascus_leucogenys
ENSXMAG00000012452	isy1	81	83.077	ENSMEUG00000008434	-	78	83.077	Notamacropus_eugenii
ENSXMAG00000012452	isy1	99	76.491	ENSOPRG00000005468	-	86	75.352	Ochotona_princeps
ENSXMAG00000012452	isy1	96	62.816	ENSODEG00000002067	-	95	64.260	Octodon_degus
ENSXMAG00000012452	isy1	88	81.746	ENSONIG00000000267	isy1	100	78.968	Oreochromis_niloticus
ENSXMAG00000012452	isy1	99	72.924	ENSOANG00000013141	-	99	71.377	Ornithorhynchus_anatinus
ENSXMAG00000012452	isy1	99	77.895	ENSOCUG00000003923	-	99	76.761	Oryctolagus_cuniculus
ENSXMAG00000012452	isy1	100	86.926	ENSORLG00000013250	isy1	100	86.926	Oryzias_latipes
ENSXMAG00000012452	isy1	100	87.279	ENSORLG00020020966	isy1	100	87.279	Oryzias_latipes_hni
ENSXMAG00000012452	isy1	100	86.572	ENSORLG00015017316	isy1	100	86.572	Oryzias_latipes_hsok
ENSXMAG00000012452	isy1	99	85.563	ENSOMEG00000023905	isy1	100	86.620	Oryzias_melastigma
ENSXMAG00000012452	isy1	99	77.465	ENSOGAG00000005142	-	99	76.678	Otolemur_garnettii
ENSXMAG00000012452	isy1	99	75.704	ENSOARG00000003231	-	94	74.205	Ovis_aries
ENSXMAG00000012452	isy1	99	76.761	ENSPPAG00000042141	-	99	77.113	Pan_paniscus
ENSXMAG00000012452	isy1	99	77.544	ENSPPRG00000003480	-	99	76.408	Panthera_pardus
ENSXMAG00000012452	isy1	99	77.544	ENSPTIG00000017919	-	99	76.408	Panthera_tigris_altaica
ENSXMAG00000012452	isy1	99	70.588	ENSPTRG00000015367	ISY1	99	71.242	Pan_troglodytes
ENSXMAG00000012452	isy1	99	77.544	ENSPANG00000004750	-	99	76.761	Papio_anubis
ENSXMAG00000012452	isy1	100	81.053	ENSPKIG00000024592	isy1	100	79.225	Paramormyrops_kingsleyae
ENSXMAG00000012452	isy1	100	76.596	ENSPSIG00000009384	-	100	77.305	Pelodiscus_sinensis
ENSXMAG00000012452	isy1	97	71.747	ENSPMGG00000016328	isy1	88	71.747	Periophthalmus_magnuspinnatus
ENSXMAG00000012452	isy1	99	77.544	ENSPEMG00000005390	Isy1	99	76.408	Peromyscus_maniculatus_bairdii
ENSXMAG00000012452	isy1	64	86.034	ENSPMAG00000005010	-	99	86.034	Petromyzon_marinus
ENSXMAG00000012452	isy1	100	79.505	ENSPCIG00000000466	-	74	78.369	Phascolarctos_cinereus
ENSXMAG00000012452	isy1	62	98.844	ENSPFOG00000010228	isy1	100	98.844	Poecilia_formosa
ENSXMAG00000012452	isy1	98	84.672	ENSPREG00000015121	isy1	100	84.672	Poecilia_reticulata
ENSXMAG00000012452	isy1	99	77.895	ENSPPYG00000013424	-	99	77.113	Pongo_abelii
ENSXMAG00000012452	isy1	99	68.197	ENSPCAG00000009535	-	99	68.525	Procavia_capensis
ENSXMAG00000012452	isy1	72	96.825	ENSPCOG00000025242	-	99	96.825	Propithecus_coquereli
ENSXMAG00000012452	isy1	100	77.895	ENSPNAG00000000703	isy1	100	78.246	Pygocentrus_nattereri
ENSXMAG00000012452	isy1	99	77.817	ENSRNOG00000010021	Isy1	99	76.678	Rattus_norvegicus
ENSXMAG00000012452	isy1	99	65.614	ENSRBIG00000028747	ISY1	99	64.789	Rhinopithecus_bieti
ENSXMAG00000012452	isy1	99	77.895	ENSRROG00000032314	ISY1	99	77.113	Rhinopithecus_roxellana
ENSXMAG00000012452	isy1	99	77.544	ENSSBOG00000029301	-	99	76.761	Saimiri_boliviensis_boliviensis
ENSXMAG00000012452	isy1	100	78.799	ENSSHAG00000017192	-	100	77.660	Sarcophilus_harrisii
ENSXMAG00000012452	isy1	100	80.420	ENSSFOG00015001127	isy1	100	79.371	Scleropages_formosus
ENSXMAG00000012452	isy1	100	85.211	ENSSMAG00000006601	isy1	100	85.563	Scophthalmus_maximus
ENSXMAG00000012452	isy1	100	87.633	ENSSDUG00000018291	isy1	100	87.633	Seriola_dumerili
ENSXMAG00000012452	isy1	100	87.279	ENSSLDG00000022252	isy1	100	87.279	Seriola_lalandi_dorsalis
ENSXMAG00000012452	isy1	63	58.470	ENSSARG00000007648	-	67	55.191	Sorex_araneus
ENSXMAG00000012452	isy1	100	78.369	ENSSPUG00000018050	-	100	78.369	Sphenodon_punctatus
ENSXMAG00000012452	isy1	72	82.178	ENSSPAG00000021900	isy1	68	89.617	Stegastes_partitus
ENSXMAG00000012452	isy1	99	78.169	ENSSSCG00000038900	-	99	77.032	Sus_scrofa
ENSXMAG00000012452	isy1	82	79.654	ENSTGUG00000007076	-	92	82.160	Taeniopygia_guttata
ENSXMAG00000012452	isy1	77	73.611	ENSTGUG00000003998	-	99	73.611	Taeniopygia_guttata
ENSXMAG00000012452	isy1	67	91.979	ENSTRUG00000002546	isy1	97	93.989	Takifugu_rubripes
ENSXMAG00000012452	isy1	100	83.039	ENSTNIG00000005224	isy1	100	82.332	Tetraodon_nigroviridis
ENSXMAG00000012452	isy1	77	63.636	ENSTBEG00000006938	-	100	62.727	Tupaia_belangeri
ENSXMAG00000012452	isy1	99	74.377	ENSTTRG00000015267	-	99	74.377	Tursiops_truncatus
ENSXMAG00000012452	isy1	99	77.544	ENSVVUG00000018261	-	99	76.408	Vulpes_vulpes