EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000012484 (Gene tree)
Gene ID: 102221057
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4651 bases
Position: chr5:12607081-12611731
Accession: 102221057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000012521	RNA_pol_I_A49	PF06870.12	2.1e-115	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000012537	-	1293	XM_005805040	ENSXMAP00000012521	415 (aa)	XP_005805097	M4ADH7

Gene Model

Click here to download ENSXMAG00000012484's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000012484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000012484	polr1e	97	44.226	ENSG00000137054	POLR1E	96	44.226	Homo_sapiens
ENSXMAG00000012484	polr1e	100	69.471	ENSAPOG00000012452	polr1e	100	69.471	Acanthochromis_polyacanthus
ENSXMAG00000012484	polr1e	98	40.879	ENSAMEG00000010193	POLR1E	94	40.879	Ailuropoda_melanoleuca
ENSXMAG00000012484	polr1e	100	66.746	ENSACIG00000009884	polr1e	99	70.663	Amphilophus_citrinellus
ENSXMAG00000012484	polr1e	100	75.721	ENSAOCG00000005665	polr1e	100	75.721	Amphiprion_ocellaris
ENSXMAG00000012484	polr1e	100	76.202	ENSAPEG00000020581	polr1e	100	76.202	Amphiprion_percula
ENSXMAG00000012484	polr1e	100	77.163	ENSATEG00000020609	polr1e	100	77.163	Anabas_testudineus
ENSXMAG00000012484	polr1e	81	39.481	ENSAPLG00000010340	POLR1E	100	39.481	Anas_platyrhynchos
ENSXMAG00000012484	polr1e	99	44.203	ENSANAG00000038046	POLR1E	98	44.203	Aotus_nancymaae
ENSXMAG00000012484	polr1e	100	74.760	ENSACLG00000013685	polr1e	99	74.760	Astatotilapia_calliptera
ENSXMAG00000012484	polr1e	99	56.280	ENSAMXG00000018181	polr1e	99	56.280	Astyanax_mexicanus
ENSXMAG00000012484	polr1e	98	47.059	ENSBTAG00000012243	POLR1E	97	47.059	Bos_taurus
ENSXMAG00000012484	polr1e	95	41.960	ENSCJAG00000010512	POLR1E	92	45.652	Callithrix_jacchus
ENSXMAG00000012484	polr1e	99	44.444	ENSCAFG00000002377	POLR1E	98	44.444	Canis_familiaris
ENSXMAG00000012484	polr1e	99	44.686	ENSCAFG00020017851	POLR1E	98	44.686	Canis_lupus_dingo
ENSXMAG00000012484	polr1e	98	46.814	ENSCHIG00000019479	POLR1E	97	46.814	Capra_hircus
ENSXMAG00000012484	polr1e	99	44.686	ENSTSYG00000002075	POLR1E	98	44.686	Carlito_syrichta
ENSXMAG00000012484	polr1e	70	42.612	ENSCAPG00000015653	POLR1E	99	42.612	Cavia_aperea
ENSXMAG00000012484	polr1e	98	45.588	ENSCPOG00000009965	POLR1E	97	45.588	Cavia_porcellus
ENSXMAG00000012484	polr1e	99	39.563	ENSCCAG00000029460	POLR1E	98	39.563	Cebus_capucinus
ENSXMAG00000012484	polr1e	93	50.000	ENSCATG00000031732	POLR1E	96	50.000	Cercocebus_atys
ENSXMAG00000012484	polr1e	87	46.961	ENSCLAG00000012701	POLR1E	95	46.961	Chinchilla_lanigera
ENSXMAG00000012484	polr1e	97	44.472	ENSCSAG00000010782	POLR1E	96	44.472	Chlorocebus_sabaeus
ENSXMAG00000012484	polr1e	95	38.346	ENSCHOG00000013024	POLR1E	82	38.346	Choloepus_hoffmanni
ENSXMAG00000012484	polr1e	99	46.301	ENSCPBG00000006923	POLR1E	99	46.301	Chrysemys_picta_bellii
ENSXMAG00000012484	polr1e	93	50.833	ENSCANG00000036112	POLR1E	96	50.833	Colobus_angolensis_palliatus
ENSXMAG00000012484	polr1e	99	43.301	ENSCGRG00001006197	Polr1e	95	43.301	Cricetulus_griseus_chok1gshd
ENSXMAG00000012484	polr1e	99	42.823	ENSCGRG00000006430	Polr1e	95	42.823	Cricetulus_griseus_crigri
ENSXMAG00000012484	polr1e	99	67.874	ENSCSEG00000005121	polr1e	99	67.874	Cynoglossus_semilaevis
ENSXMAG00000012484	polr1e	100	84.819	ENSCVAG00000019759	polr1e	100	84.819	Cyprinodon_variegatus
ENSXMAG00000012484	polr1e	97	56.824	ENSDARG00000006434	polr1e	100	56.386	Danio_rerio
ENSXMAG00000012484	polr1e	99	37.684	ENSDNOG00000010257	POLR1E	99	37.684	Dasypus_novemcinctus
ENSXMAG00000012484	polr1e	83	43.143	ENSETEG00000018204	POLR1E	96	43.143	Echinops_telfairi
ENSXMAG00000012484	polr1e	99	44.686	ENSEASG00005000675	POLR1E	98	44.686	Equus_asinus_asinus
ENSXMAG00000012484	polr1e	99	44.686	ENSECAG00000014669	POLR1E	98	44.686	Equus_caballus
ENSXMAG00000012484	polr1e	95	39.899	ENSEEUG00000011928	POLR1E	84	39.899	Erinaceus_europaeus
ENSXMAG00000012484	polr1e	99	66.908	ENSELUG00000008150	polr1e	99	66.908	Esox_lucius
ENSXMAG00000012484	polr1e	99	44.578	ENSFCAG00000013081	POLR1E	98	44.578	Felis_catus
ENSXMAG00000012484	polr1e	95	43.392	ENSFALG00000012950	POLR1E	99	43.392	Ficedula_albicollis
ENSXMAG00000012484	polr1e	98	47.202	ENSFDAG00000016917	POLR1E	97	47.202	Fukomys_damarensis
ENSXMAG00000012484	polr1e	100	84.615	ENSFHEG00000009801	polr1e	100	84.615	Fundulus_heteroclitus
ENSXMAG00000012484	polr1e	99	53.938	ENSGMOG00000003336	POLR1E	99	53.938	Gadus_morhua
ENSXMAG00000012484	polr1e	99	44.391	ENSGALG00000005395	POLR1E	99	44.391	Gallus_gallus
ENSXMAG00000012484	polr1e	100	93.735	ENSGAFG00000004850	polr1e	100	93.735	Gambusia_affinis
ENSXMAG00000012484	polr1e	100	68.974	ENSGACG00000016087	polr1e	100	68.974	Gasterosteus_aculeatus
ENSXMAG00000012484	polr1e	97	42.647	ENSGAGG00000001659	POLR1E	99	42.344	Gopherus_agassizii
ENSXMAG00000012484	polr1e	99	43.750	ENSGGOG00000001882	POLR1E	99	43.750	Gorilla_gorilla
ENSXMAG00000012484	polr1e	100	74.760	ENSHBUG00000002559	polr1e	99	74.760	Haplochromis_burtoni
ENSXMAG00000012484	polr1e	98	47.059	ENSHGLG00000002036	POLR1E	97	47.059	Heterocephalus_glaber_female
ENSXMAG00000012484	polr1e	98	47.304	ENSHGLG00100012784	POLR1E	97	47.304	Heterocephalus_glaber_male
ENSXMAG00000012484	polr1e	100	69.639	ENSHCOG00000002774	polr1e	100	69.639	Hippocampus_comes
ENSXMAG00000012484	polr1e	99	54.348	ENSIPUG00000003019	polr1e	99	54.348	Ictalurus_punctatus
ENSXMAG00000012484	polr1e	99	44.928	ENSSTOG00000009810	POLR1E	99	44.928	Ictidomys_tridecemlineatus
ENSXMAG00000012484	polr1e	98	45.146	ENSJJAG00000020731	Polr1e	93	45.146	Jaculus_jaculus
ENSXMAG00000012484	polr1e	100	79.567	ENSKMAG00000000046	polr1e	100	79.567	Kryptolebias_marmoratus
ENSXMAG00000012484	polr1e	99	74.699	ENSLBEG00000003104	polr1e	99	74.699	Labrus_bergylta
ENSXMAG00000012484	polr1e	86	51.515	ENSLACG00000003416	POLR1E	99	51.515	Latimeria_chalumnae
ENSXMAG00000012484	polr1e	99	52.518	ENSLOCG00000012859	polr1e	99	52.518	Lepisosteus_oculatus
ENSXMAG00000012484	polr1e	99	44.844	ENSLAFG00000012831	POLR1E	98	44.844	Loxodonta_africana
ENSXMAG00000012484	polr1e	93	50.000	ENSMFAG00000045465	POLR1E	96	50.000	Macaca_fascicularis
ENSXMAG00000012484	polr1e	93	50.000	ENSMMUG00000017892	POLR1E	96	50.000	Macaca_mulatta
ENSXMAG00000012484	polr1e	94	40.943	ENSMNEG00000040283	POLR1E	95	40.833	Macaca_nemestrina
ENSXMAG00000012484	polr1e	93	50.000	ENSMLEG00000031135	POLR1E	96	50.000	Mandrillus_leucophaeus
ENSXMAG00000012484	polr1e	99	75.181	ENSMAMG00000001260	polr1e	99	75.181	Mastacembelus_armatus
ENSXMAG00000012484	polr1e	100	74.760	ENSMZEG00005021536	polr1e	99	74.760	Maylandia_zebra
ENSXMAG00000012484	polr1e	98	44.282	ENSMAUG00000021044	Polr1e	93	44.282	Mesocricetus_auratus
ENSXMAG00000012484	polr1e	99	45.673	ENSMICG00000003673	POLR1E	98	45.673	Microcebus_murinus
ENSXMAG00000012484	polr1e	98	42.298	ENSMOCG00000012920	Polr1e	94	42.298	Microtus_ochrogaster
ENSXMAG00000012484	polr1e	100	74.101	ENSMMOG00000007391	polr1e	100	74.101	Mola_mola
ENSXMAG00000012484	polr1e	96	45.025	ENSMODG00000002884	POLR1E	98	45.025	Monodelphis_domestica
ENSXMAG00000012484	polr1e	100	77.163	ENSMALG00000002665	polr1e	99	77.163	Monopterus_albus
ENSXMAG00000012484	polr1e	99	42.995	MGP_CAROLIEiJ_G0025967	Polr1e	97	43.434	Mus_caroli
ENSXMAG00000012484	polr1e	99	43.373	ENSMUSG00000028318	Polr1e	97	43.829	Mus_musculus
ENSXMAG00000012484	polr1e	99	44.153	MGP_PahariEiJ_G0024114	Polr1e	97	44.638	Mus_pahari
ENSXMAG00000012484	polr1e	99	43.614	MGP_SPRETEiJ_G0026930	Polr1e	97	44.081	Mus_spretus
ENSXMAG00000012484	polr1e	99	40.517	ENSMPUG00000006040	POLR1E	98	38.280	Mustela_putorius_furo
ENSXMAG00000012484	polr1e	99	46.618	ENSMLUG00000012688	POLR1E	95	46.618	Myotis_lucifugus
ENSXMAG00000012484	polr1e	98	45.833	ENSNGAG00000002520	Polr1e	93	45.833	Nannospalax_galili
ENSXMAG00000012484	polr1e	100	75.240	ENSNBRG00000016822	polr1e	99	75.240	Neolamprologus_brichardi
ENSXMAG00000012484	polr1e	93	49.167	ENSNLEG00000003616	POLR1E	96	49.167	Nomascus_leucogenys
ENSXMAG00000012484	polr1e	73	50.222	ENSMEUG00000015372	-	80	50.222	Notamacropus_eugenii
ENSXMAG00000012484	polr1e	86	38.333	ENSOPRG00000014206	POLR1E	99	38.333	Ochotona_princeps
ENSXMAG00000012484	polr1e	98	47.304	ENSODEG00000014565	POLR1E	94	47.304	Octodon_degus
ENSXMAG00000012484	polr1e	100	75.481	ENSONIG00000008921	polr1e	99	75.481	Oreochromis_niloticus
ENSXMAG00000012484	polr1e	99	43.885	ENSOCUG00000024773	POLR1E	98	43.885	Oryctolagus_cuniculus
ENSXMAG00000012484	polr1e	100	72.596	ENSORLG00000005143	polr1e	100	72.596	Oryzias_latipes
ENSXMAG00000012484	polr1e	93	69.251	ENSORLG00020007271	polr1e	99	69.251	Oryzias_latipes_hni
ENSXMAG00000012484	polr1e	100	72.596	ENSORLG00015000137	polr1e	100	72.596	Oryzias_latipes_hsok
ENSXMAG00000012484	polr1e	100	70.433	ENSOMEG00000013264	polr1e	98	70.433	Oryzias_melastigma
ENSXMAG00000012484	polr1e	99	44.686	ENSOGAG00000012981	POLR1E	96	44.686	Otolemur_garnettii
ENSXMAG00000012484	polr1e	98	47.059	ENSOARG00000011465	POLR1E	93	47.059	Ovis_aries
ENSXMAG00000012484	polr1e	93	49.167	ENSPPAG00000034566	POLR1E	96	49.167	Pan_paniscus
ENSXMAG00000012484	polr1e	99	44.578	ENSPPRG00000005649	POLR1E	98	44.578	Panthera_pardus
ENSXMAG00000012484	polr1e	99	44.578	ENSPTIG00000009774	POLR1E	98	44.578	Panthera_tigris_altaica
ENSXMAG00000012484	polr1e	93	49.167	ENSPTRG00000020944	POLR1E	96	49.167	Pan_troglodytes
ENSXMAG00000012484	polr1e	93	50.000	ENSPANG00000025563	POLR1E	96	50.000	Papio_anubis
ENSXMAG00000012484	polr1e	99	60.095	ENSPKIG00000003562	polr1e	99	60.095	Paramormyrops_kingsleyae
ENSXMAG00000012484	polr1e	95	45.477	ENSPSIG00000003274	POLR1E	93	45.477	Pelodiscus_sinensis
ENSXMAG00000012484	polr1e	95	64.975	ENSPMGG00000024169	polr1e	95	64.975	Periophthalmus_magnuspinnatus
ENSXMAG00000012484	polr1e	99	36.740	ENSPEMG00000022300	-	94	36.740	Peromyscus_maniculatus_bairdii
ENSXMAG00000012484	polr1e	99	42.754	ENSPEMG00000019151	-	95	42.754	Peromyscus_maniculatus_bairdii
ENSXMAG00000012484	polr1e	96	46.517	ENSPCIG00000014798	POLR1E	98	46.517	Phascolarctos_cinereus
ENSXMAG00000012484	polr1e	100	89.116	ENSPFOG00000019627	polr1e	99	89.116	Poecilia_formosa
ENSXMAG00000012484	polr1e	100	94.458	ENSPLAG00000022679	polr1e	100	94.458	Poecilia_latipinna
ENSXMAG00000012484	polr1e	87	95.265	ENSPMEG00000022123	polr1e	93	95.265	Poecilia_mexicana
ENSXMAG00000012484	polr1e	100	93.976	ENSPREG00000009470	polr1e	100	93.976	Poecilia_reticulata
ENSXMAG00000012484	polr1e	94	45.547	ENSPPYG00000019061	POLR1E	93	45.547	Pongo_abelii
ENSXMAG00000012484	polr1e	53	39.286	ENSPCAG00000004891	POLR1E	72	39.286	Procavia_capensis
ENSXMAG00000012484	polr1e	99	45.192	ENSPCOG00000027448	POLR1E	98	45.192	Propithecus_coquereli
ENSXMAG00000012484	polr1e	95	44.949	ENSPVAG00000007940	POLR1E	83	44.949	Pteropus_vampyrus
ENSXMAG00000012484	polr1e	100	75.000	ENSPNYG00000001032	polr1e	99	75.000	Pundamilia_nyererei
ENSXMAG00000012484	polr1e	99	56.145	ENSPNAG00000006987	polr1e	99	56.145	Pygocentrus_nattereri
ENSXMAG00000012484	polr1e	98	43.382	ENSRNOG00000012664	Polr1e	93	43.382	Rattus_norvegicus
ENSXMAG00000012484	polr1e	94	44.810	ENSRBIG00000034214	POLR1E	95	46.175	Rhinopithecus_bieti
ENSXMAG00000012484	polr1e	93	50.000	ENSRROG00000031986	POLR1E	96	50.000	Rhinopithecus_roxellana
ENSXMAG00000012484	polr1e	94	45.293	ENSSBOG00000021415	POLR1E	93	45.293	Saimiri_boliviensis_boliviensis
ENSXMAG00000012484	polr1e	82	44.348	ENSSHAG00000016084	POLR1E	95	44.348	Sarcophilus_harrisii
ENSXMAG00000012484	polr1e	99	59.712	ENSSFOG00015002293	polr1e	99	59.712	Scleropages_formosus
ENSXMAG00000012484	polr1e	99	75.362	ENSSMAG00000011672	polr1e	93	75.362	Scophthalmus_maximus
ENSXMAG00000012484	polr1e	100	76.202	ENSSDUG00000022279	polr1e	99	76.202	Seriola_dumerili
ENSXMAG00000012484	polr1e	100	76.202	ENSSLDG00000024918	polr1e	99	76.202	Seriola_lalandi_dorsalis
ENSXMAG00000012484	polr1e	56	38.793	ENSSARG00000009810	-	58	38.793	Sorex_araneus
ENSXMAG00000012484	polr1e	100	45.238	ENSSPUG00000009499	POLR1E	100	45.238	Sphenodon_punctatus
ENSXMAG00000012484	polr1e	100	77.590	ENSSPAG00000021240	polr1e	100	77.590	Stegastes_partitus
ENSXMAG00000012484	polr1e	99	45.169	ENSSSCG00000005347	POLR1E	98	45.169	Sus_scrofa
ENSXMAG00000012484	polr1e	95	38.170	ENSTGUG00000007169	POLR1E	100	38.170	Taeniopygia_guttata
ENSXMAG00000012484	polr1e	99	68.421	ENSTRUG00000020779	polr1e	99	68.421	Takifugu_rubripes
ENSXMAG00000012484	polr1e	99	71.154	ENSTNIG00000017812	polr1e	99	71.154	Tetraodon_nigroviridis
ENSXMAG00000012484	polr1e	95	46.465	ENSTBEG00000013786	POLR1E	84	46.465	Tupaia_belangeri
ENSXMAG00000012484	polr1e	95	45.137	ENSTTRG00000008294	POLR1E	84	45.137	Tursiops_truncatus
ENSXMAG00000012484	polr1e	99	45.411	ENSUAMG00000012474	POLR1E	98	47.354	Ursus_americanus
ENSXMAG00000012484	polr1e	99	45.411	ENSUMAG00000011496	POLR1E	98	45.411	Ursus_maritimus
ENSXMAG00000012484	polr1e	81	41.935	ENSVPAG00000009048	POLR1E	81	41.935	Vicugna_pacos
ENSXMAG00000012484	polr1e	98	45.098	ENSVVUG00000019954	POLR1E	97	45.098	Vulpes_vulpes
ENSXMAG00000012484	polr1e	99	43.095	ENSXETG00000006533	polr1e	99	43.095	Xenopus_tropicalis
ENSXMAG00000012484	polr1e	100	92.067	ENSXCOG00000013706	polr1e	100	92.067	Xiphophorus_couchianus