EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000012555 (Gene tree)
Gene ID: 102221518
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 1966 bases
Position: chr8:26877612-26879577
Accession: 102221518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000012573	Ribosomal_S18	PF01084.20	5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000012589	-	468	XM_005814923	ENSXMAP00000012573	155 (aa)	XP_005814980	M4ADM9

Gene Model

Click here to download ENSXMAG00000012555's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000012555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000012555	mrps18c	83	65.116	ENSAPOG00000019045	mrps18c	100	65.116	Acanthochromis_polyacanthus
ENSXMAG00000012555	mrps18c	59	75.000	ENSACIG00000020253	mrps18c	91	75.000	Amphilophus_citrinellus
ENSXMAG00000012555	mrps18c	83	61.240	ENSAOCG00000014338	mrps18c	100	61.240	Amphiprion_ocellaris
ENSXMAG00000012555	mrps18c	83	62.016	ENSAPEG00000022956	mrps18c	100	62.016	Amphiprion_percula
ENSXMAG00000012555	mrps18c	56	79.310	ENSAPEG00000023068	-	87	76.087	Amphiprion_percula
ENSXMAG00000012555	mrps18c	83	69.231	ENSATEG00000023417	mrps18c	100	69.231	Anabas_testudineus
ENSXMAG00000012555	mrps18c	57	65.169	ENSAPLG00000012544	-	86	65.169	Anas_platyrhynchos
ENSXMAG00000012555	mrps18c	60	80.645	ENSACLG00000010521	mrps18c	91	80.645	Astatotilapia_calliptera
ENSXMAG00000012555	mrps18c	59	72.527	ENSAMXG00000012238	mrps18c	92	72.527	Astyanax_mexicanus
ENSXMAG00000012555	mrps18c	77	56.452	ENSCPBG00000007783	-	76	56.452	Chrysemys_picta_bellii
ENSXMAG00000012555	mrps18c	66	70.588	ENSCSEG00000000711	mrps18c	72	70.588	Cynoglossus_semilaevis
ENSXMAG00000012555	mrps18c	83	75.000	ENSCVAG00000020169	mrps18c	100	75.000	Cyprinodon_variegatus
ENSXMAG00000012555	mrps18c	77	62.097	ENSDARG00000069624	mrps18c	91	62.097	Danio_rerio
ENSXMAG00000012555	mrps18c	83	57.143	ENSELUG00000024603	mrps18c	100	57.143	Esox_lucius
ENSXMAG00000012555	mrps18c	84	82.308	ENSFHEG00000015550	mrps18c	96	82.308	Fundulus_heteroclitus
ENSXMAG00000012555	mrps18c	83	82.031	ENSFHEG00000018752	-	100	82.031	Fundulus_heteroclitus
ENSXMAG00000012555	mrps18c	66	59.804	ENSGALG00000023191	MRPS18C	71	59.804	Gallus_gallus
ENSXMAG00000012555	mrps18c	100	94.194	ENSGAFG00000008048	mrps18c	100	94.194	Gambusia_affinis
ENSXMAG00000012555	mrps18c	66	63.107	ENSGAGG00000015144	-	73	63.107	Gopherus_agassizii
ENSXMAG00000012555	mrps18c	83	67.692	ENSHBUG00000002008	mrps18c	100	67.692	Haplochromis_burtoni
ENSXMAG00000012555	mrps18c	68	71.296	ENSHCOG00000013161	mrps18c	82	71.296	Hippocampus_comes
ENSXMAG00000012555	mrps18c	59	64.835	ENSIPUG00000003783	mrps18c	88	64.835	Ictalurus_punctatus
ENSXMAG00000012555	mrps18c	83	75.000	ENSKMAG00000016467	mrps18c	100	75.000	Kryptolebias_marmoratus
ENSXMAG00000012555	mrps18c	83	64.615	ENSLBEG00000019174	mrps18c	100	64.615	Labrus_bergylta
ENSXMAG00000012555	mrps18c	83	64.615	ENSLBEG00000021861	mrps18c	100	64.615	Labrus_bergylta
ENSXMAG00000012555	mrps18c	81	55.303	ENSLACG00000011243	mrps18c	100	55.303	Latimeria_chalumnae
ENSXMAG00000012555	mrps18c	71	62.727	ENSLOCG00000012115	mrps18c	78	62.727	Lepisosteus_oculatus
ENSXMAG00000012555	mrps18c	83	60.448	ENSMAMG00000012386	mrps18c	100	60.448	Mastacembelus_armatus
ENSXMAG00000012555	mrps18c	83	67.692	ENSMZEG00005023278	mrps18c	100	67.692	Maylandia_zebra
ENSXMAG00000012555	mrps18c	60	78.495	ENSMMOG00000011316	mrps18c	71	78.495	Mola_mola
ENSXMAG00000012555	mrps18c	83	67.692	ENSNBRG00000006182	mrps18c	100	67.692	Neolamprologus_brichardi
ENSXMAG00000012555	mrps18c	55	67.059	ENSMEUG00000010972	-	67	67.059	Notamacropus_eugenii
ENSXMAG00000012555	mrps18c	85	66.917	ENSONIG00000012527	mrps18c	91	80.435	Oreochromis_niloticus
ENSXMAG00000012555	mrps18c	83	63.566	ENSORLG00015006869	mrps18c	100	63.566	Oryzias_latipes_hsok
ENSXMAG00000012555	mrps18c	56	73.563	ENSOMEG00000005009	mrps18c	84	73.563	Oryzias_melastigma
ENSXMAG00000012555	mrps18c	83	58.571	ENSPKIG00000021736	mrps18c	100	58.571	Paramormyrops_kingsleyae
ENSXMAG00000012555	mrps18c	59	74.725	ENSPMGG00000002991	mrps18c	92	74.725	Periophthalmus_magnuspinnatus
ENSXMAG00000012555	mrps18c	100	92.903	ENSPFOG00000002351	mrps18c	100	92.903	Poecilia_formosa
ENSXMAG00000012555	mrps18c	83	93.750	ENSPLAG00000015187	mrps18c	100	93.750	Poecilia_latipinna
ENSXMAG00000012555	mrps18c	100	93.548	ENSPMEG00000014488	mrps18c	100	93.548	Poecilia_mexicana
ENSXMAG00000012555	mrps18c	57	94.318	ENSPREG00000012593	mrps18c	90	94.318	Poecilia_reticulata
ENSXMAG00000012555	mrps18c	83	66.923	ENSPNYG00000010654	mrps18c	100	66.923	Pundamilia_nyererei
ENSXMAG00000012555	mrps18c	68	62.857	ENSPNAG00000009350	mrps18c	93	62.857	Pygocentrus_nattereri
ENSXMAG00000012555	mrps18c	88	61.151	ENSSFOG00015019444	mrps18c	100	61.151	Scleropages_formosus
ENSXMAG00000012555	mrps18c	83	67.188	ENSSDUG00000015676	mrps18c	100	67.188	Seriola_dumerili
ENSXMAG00000012555	mrps18c	68	67.241	ENSSLDG00000002034	mrps18c	90	67.241	Seriola_lalandi_dorsalis
ENSXMAG00000012555	mrps18c	66	56.311	ENSSPUG00000013990	-	72	56.311	Sphenodon_punctatus
ENSXMAG00000012555	mrps18c	82	61.719	ENSSPAG00000008687	mrps18c	99	61.719	Stegastes_partitus
ENSXMAG00000012555	mrps18c	83	60.000	ENSTRUG00000024403	mrps18c	100	60.000	Takifugu_rubripes
ENSXMAG00000012555	mrps18c	83	63.846	ENSTNIG00000005674	mrps18c	100	63.846	Tetraodon_nigroviridis
ENSXMAG00000012555	mrps18c	58	64.444	ENSXETG00000027597	mrps18c	69	64.444	Xenopus_tropicalis
ENSXMAG00000012555	mrps18c	100	90.968	ENSXCOG00000016208	mrps18c	100	90.968	Xiphophorus_couchianus