EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000012692 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 5316 bases
Position: chr1:28076984-28082299
Accession: 102237601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000012717	zf-C2H2	PF00096.26	2e-20	1	4
ENSXMAP00000012717	zf-C2H2	PF00096.26	2e-20	2	4
ENSXMAP00000012717	zf-C2H2	PF00096.26	2e-20	3	4
ENSXMAP00000012717	zf-C2H2	PF00096.26	2e-20	4	4
ENSXMAP00000012717	zf-met	PF12874.7	4e-10	1	2
ENSXMAP00000012717	zf-met	PF12874.7	4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000012733	-	3114	XM_005798933	ENSXMAP00000012717	1037 (aa)	XP_005798990	M4AE23

Gene Model

Click here to download ENSXMAG00000012692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000012692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000012692	sall4	100	41.346	ENSG00000101115	SALL4	100	44.737	Homo_sapiens
ENSXMAG00000012692	sall4	100	71.337	ENSAPOG00000002465	sall4	100	70.394	Acanthochromis_polyacanthus
ENSXMAG00000012692	sall4	100	41.805	ENSAMEG00000013250	-	99	42.608	Ailuropoda_melanoleuca
ENSXMAG00000012692	sall4	100	69.069	ENSACIG00000017298	sall4	100	69.069	Amphilophus_citrinellus
ENSXMAG00000012692	sall4	100	72.136	ENSAOCG00000023678	sall4	100	71.731	Amphiprion_ocellaris
ENSXMAG00000012692	sall4	100	72.468	ENSAPEG00000000751	sall4	100	71.823	Amphiprion_percula
ENSXMAG00000012692	sall4	100	71.324	ENSATEG00000024480	sall4	100	71.232	Anabas_testudineus
ENSXMAG00000012692	sall4	100	47.392	ENSAPLG00000006498	SALL4	100	47.387	Anas_platyrhynchos
ENSXMAG00000012692	sall4	100	47.446	ENSACAG00000012748	SALL4	100	47.446	Anolis_carolinensis
ENSXMAG00000012692	sall4	100	41.850	ENSANAG00000023352	SALL4	75	67.308	Aotus_nancymaae
ENSXMAG00000012692	sall4	100	69.846	ENSACLG00000017851	sall4	100	69.846	Astatotilapia_calliptera
ENSXMAG00000012692	sall4	96	67.647	ENSAMXG00000001254	sall4	99	59.624	Astyanax_mexicanus
ENSXMAG00000012692	sall4	100	40.457	ENSBTAG00000003101	SALL4	100	40.969	Bos_taurus
ENSXMAG00000012692	sall4	80	42.247	ENSCJAG00000000591	SALL4	97	42.070	Callithrix_jacchus
ENSXMAG00000012692	sall4	100	42.281	ENSCAFG00000011738	-	100	41.907	Canis_familiaris
ENSXMAG00000012692	sall4	100	42.318	ENSCAFG00020021870	SALL4	100	41.907	Canis_lupus_dingo
ENSXMAG00000012692	sall4	100	39.877	ENSCHIG00000026270	SALL4	100	40.581	Capra_hircus
ENSXMAG00000012692	sall4	100	40.685	ENSTSYG00000007359	SALL4	100	44.737	Carlito_syrichta
ENSXMAG00000012692	sall4	98	41.405	ENSCAPG00000012135	SALL4	97	41.906	Cavia_aperea
ENSXMAG00000012692	sall4	100	41.930	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSXMAG00000012692	sall4	100	41.410	ENSCATG00000030757	SALL4	75	67.308	Cercocebus_atys
ENSXMAG00000012692	sall4	100	41.320	ENSCLAG00000010479	SALL4	100	41.833	Chinchilla_lanigera
ENSXMAG00000012692	sall4	100	41.453	ENSCSAG00000015269	SALL4	100	41.807	Chlorocebus_sabaeus
ENSXMAG00000012692	sall4	99	47.611	ENSCPBG00000014995	SALL4	99	48.084	Chrysemys_picta_bellii
ENSXMAG00000012692	sall4	100	41.536	ENSCANG00000036463	SALL4	100	41.710	Colobus_angolensis_palliatus
ENSXMAG00000012692	sall4	78	63.462	ENSCGRG00001019569	Sall4	83	63.462	Cricetulus_griseus_chok1gshd
ENSXMAG00000012692	sall4	78	63.462	ENSCGRG00000000462	Sall4	100	79.012	Cricetulus_griseus_crigri
ENSXMAG00000012692	sall4	93	84.828	ENSCSEG00000014604	sall4	96	84.828	Cynoglossus_semilaevis
ENSXMAG00000012692	sall4	100	78.353	ENSCVAG00000010815	sall4	100	78.538	Cyprinodon_variegatus
ENSXMAG00000012692	sall4	99	57.428	ENSDARG00000044485	sall4	99	57.518	Danio_rerio
ENSXMAG00000012692	sall4	100	42.304	ENSDNOG00000040633	SALL4	100	41.995	Dasypus_novemcinctus
ENSXMAG00000012692	sall4	100	40.110	ENSDORG00000012841	Sall4	100	75.325	Dipodomys_ordii
ENSXMAG00000012692	sall4	69	65.385	ENSETEG00000012475	-	57	65.385	Echinops_telfairi
ENSXMAG00000012692	sall4	100	42.342	ENSECAG00000018533	SALL4	100	41.747	Equus_caballus
ENSXMAG00000012692	sall4	100	41.915	ENSEEUG00000003649	SALL4	99	42.024	Erinaceus_europaeus
ENSXMAG00000012692	sall4	100	58.201	ENSELUG00000005696	sall4	100	58.280	Esox_lucius
ENSXMAG00000012692	sall4	100	41.703	ENSFCAG00000002822	SALL4	76	67.308	Felis_catus
ENSXMAG00000012692	sall4	100	46.561	ENSFALG00000013149	SALL4	100	47.623	Ficedula_albicollis
ENSXMAG00000012692	sall4	100	39.804	ENSFDAG00000017812	SALL4	100	40.252	Fukomys_damarensis
ENSXMAG00000012692	sall4	100	75.827	ENSFHEG00000014187	sall4	100	75.827	Fundulus_heteroclitus
ENSXMAG00000012692	sall4	100	62.100	ENSGMOG00000003822	sall4	100	62.100	Gadus_morhua
ENSXMAG00000012692	sall4	100	46.939	ENSGALG00000041365	SALL4	100	47.741	Gallus_gallus
ENSXMAG00000012692	sall4	100	88.550	ENSGAFG00000019925	sall4	100	88.550	Gambusia_affinis
ENSXMAG00000012692	sall4	100	65.668	ENSGACG00000011124	sall4	100	65.668	Gasterosteus_aculeatus
ENSXMAG00000012692	sall4	99	48.239	ENSGAGG00000002297	SALL4	100	48.063	Gopherus_agassizii
ENSXMAG00000012692	sall4	100	41.615	ENSGGOG00000001832	SALL4	75	67.308	Gorilla_gorilla
ENSXMAG00000012692	sall4	100	70.118	ENSHBUG00000007327	sall4	100	70.118	Haplochromis_burtoni
ENSXMAG00000012692	sall4	98	41.280	ENSHGLG00000009043	SALL4	97	41.335	Heterocephalus_glaber_female
ENSXMAG00000012692	sall4	98	41.280	ENSHGLG00100002722	SALL4	97	41.171	Heterocephalus_glaber_male
ENSXMAG00000012692	sall4	100	67.769	ENSHCOG00000008519	sall4	100	67.677	Hippocampus_comes
ENSXMAG00000012692	sall4	96	67.059	ENSIPUG00000019170	sall4	99	58.386	Ictalurus_punctatus
ENSXMAG00000012692	sall4	61	44.737	ENSSTOG00000025002	SALL4	100	84.507	Ictidomys_tridecemlineatus
ENSXMAG00000012692	sall4	100	42.294	ENSJJAG00000020688	Sall4	93	85.915	Jaculus_jaculus
ENSXMAG00000012692	sall4	100	72.903	ENSKMAG00000002501	sall4	84	81.620	Kryptolebias_marmoratus
ENSXMAG00000012692	sall4	100	69.391	ENSLBEG00000019951	sall4	100	68.847	Labrus_bergylta
ENSXMAG00000012692	sall4	96	48.197	ENSLACG00000013898	SALL4	99	57.432	Latimeria_chalumnae
ENSXMAG00000012692	sall4	100	56.403	ENSLOCG00000002427	sall4	100	56.522	Lepisosteus_oculatus
ENSXMAG00000012692	sall4	100	42.972	ENSLAFG00000004309	SALL4	100	42.806	Loxodonta_africana
ENSXMAG00000012692	sall4	100	41.740	ENSMFAG00000027169	SALL4	100	41.953	Macaca_fascicularis
ENSXMAG00000012692	sall4	87	42.901	ENSMMUG00000003870	SALL4	100	44.737	Macaca_mulatta
ENSXMAG00000012692	sall4	87	42.901	ENSMNEG00000035995	SALL4	75	67.308	Macaca_nemestrina
ENSXMAG00000012692	sall4	100	41.498	ENSMLEG00000030467	SALL4	100	41.834	Mandrillus_leucophaeus
ENSXMAG00000012692	sall4	100	70.163	ENSMAMG00000005223	sall4	100	70.072	Mastacembelus_armatus
ENSXMAG00000012692	sall4	100	69.755	ENSMZEG00005023418	sall4	100	69.755	Maylandia_zebra
ENSXMAG00000012692	sall4	73	51.584	ENSMGAG00000009344	SALL4	100	52.652	Meleagris_gallopavo
ENSXMAG00000012692	sall4	77	65.385	ENSMAUG00000015814	Sall4	93	72.727	Mesocricetus_auratus
ENSXMAG00000012692	sall4	100	41.924	ENSMICG00000000027	SALL4	75	67.308	Microcebus_murinus
ENSXMAG00000012692	sall4	100	39.929	ENSMOCG00000018245	Sall4	93	83.562	Microtus_ochrogaster
ENSXMAG00000012692	sall4	100	71.336	ENSMMOG00000014929	sall4	100	71.429	Mola_mola
ENSXMAG00000012692	sall4	99	43.436	ENSMODG00000016387	SALL4	97	43.528	Monodelphis_domestica
ENSXMAG00000012692	sall4	100	72.578	ENSMALG00000018709	sall4	100	71.846	Monopterus_albus
ENSXMAG00000012692	sall4	100	40.929	MGP_CAROLIEiJ_G0024723	Sall4	100	86.111	Mus_caroli
ENSXMAG00000012692	sall4	100	40.760	ENSMUSG00000027547	Sall4	100	86.111	Mus_musculus
ENSXMAG00000012692	sall4	100	39.529	MGP_PahariEiJ_G0026164	Sall4	100	86.111	Mus_pahari
ENSXMAG00000012692	sall4	100	40.760	MGP_SPRETEiJ_G0025643	Sall4	100	86.111	Mus_spretus
ENSXMAG00000012692	sall4	100	41.264	ENSMPUG00000017543	SALL4	96	40.841	Mustela_putorius_furo
ENSXMAG00000012692	sall4	99	33.456	ENSMLUG00000028073	-	99	32.873	Myotis_lucifugus
ENSXMAG00000012692	sall4	100	39.524	ENSMLUG00000008405	-	100	39.361	Myotis_lucifugus
ENSXMAG00000012692	sall4	98	41.598	ENSMLUG00000007060	-	99	41.430	Myotis_lucifugus
ENSXMAG00000012692	sall4	100	40.642	ENSNGAG00000017833	Sall4	77	67.308	Nannospalax_galili
ENSXMAG00000012692	sall4	100	68.330	ENSNBRG00000001829	sall4	100	68.784	Neolamprologus_brichardi
ENSXMAG00000012692	sall4	100	41.711	ENSNLEG00000007013	SALL4	100	41.838	Nomascus_leucogenys
ENSXMAG00000012692	sall4	75	54.902	ENSMEUG00000005793	-	99	54.902	Notamacropus_eugenii
ENSXMAG00000012692	sall4	100	42.473	ENSOPRG00000011640	SALL4	100	42.460	Ochotona_princeps
ENSXMAG00000012692	sall4	100	70.027	ENSONIG00000016557	sall4	100	70.300	Oreochromis_niloticus
ENSXMAG00000012692	sall4	100	48.138	ENSOANG00000008667	SALL4	97	48.089	Ornithorhynchus_anatinus
ENSXMAG00000012692	sall4	98	41.026	ENSOCUG00000011797	SALL4	100	40.653	Oryctolagus_cuniculus
ENSXMAG00000012692	sall4	100	69.545	ENSORLG00000016130	sall4	100	69.545	Oryzias_latipes
ENSXMAG00000012692	sall4	100	69.167	ENSORLG00020007339	sall4	100	69.444	Oryzias_latipes_hni
ENSXMAG00000012692	sall4	100	68.698	ENSORLG00015002265	sall4	100	68.825	Oryzias_latipes_hsok
ENSXMAG00000012692	sall4	100	68.972	ENSOMEG00000017344	sall4	100	68.972	Oryzias_melastigma
ENSXMAG00000012692	sall4	97	42.410	ENSOGAG00000013799	SALL4	100	42.343	Otolemur_garnettii
ENSXMAG00000012692	sall4	100	40.543	ENSOARG00000014570	SALL4	100	40.724	Ovis_aries
ENSXMAG00000012692	sall4	100	41.572	ENSPPAG00000038064	SALL4	75	67.308	Pan_paniscus
ENSXMAG00000012692	sall4	100	41.638	ENSPPRG00000008677	SALL4	76	67.308	Panthera_pardus
ENSXMAG00000012692	sall4	100	41.637	ENSPTRG00000013631	SALL4	75	67.308	Pan_troglodytes
ENSXMAG00000012692	sall4	87	42.901	ENSPANG00000021792	SALL4	75	67.308	Papio_anubis
ENSXMAG00000012692	sall4	100	56.636	ENSPKIG00000007074	sall4	100	56.909	Paramormyrops_kingsleyae
ENSXMAG00000012692	sall4	99	48.092	ENSPSIG00000009066	SALL4	100	47.627	Pelodiscus_sinensis
ENSXMAG00000012692	sall4	96	65.580	ENSPMGG00000022551	sall4	100	59.195	Periophthalmus_magnuspinnatus
ENSXMAG00000012692	sall4	100	39.769	ENSPEMG00000022706	Sall4	100	86.111	Peromyscus_maniculatus_bairdii
ENSXMAG00000012692	sall4	100	44.406	ENSPCIG00000022838	SALL4	97	44.803	Phascolarctos_cinereus
ENSXMAG00000012692	sall4	100	86.569	ENSPFOG00000001442	sall4	100	86.569	Poecilia_formosa
ENSXMAG00000012692	sall4	100	86.477	ENSPLAG00000008760	sall4	100	86.477	Poecilia_latipinna
ENSXMAG00000012692	sall4	100	86.753	ENSPMEG00000008497	sall4	100	86.753	Poecilia_mexicana
ENSXMAG00000012692	sall4	100	86.569	ENSPREG00000021140	sall4	100	86.569	Poecilia_reticulata
ENSXMAG00000012692	sall4	100	41.652	ENSPPYG00000011138	SALL4	100	41.637	Pongo_abelii
ENSXMAG00000012692	sall4	86	69.565	ENSPCAG00000004726	SALL4	93	69.565	Procavia_capensis
ENSXMAG00000012692	sall4	100	42.087	ENSPCOG00000016321	SALL4	75	67.308	Propithecus_coquereli
ENSXMAG00000012692	sall4	94	41.087	ENSPVAG00000002075	SALL4	94	40.551	Pteropus_vampyrus
ENSXMAG00000012692	sall4	100	70.000	ENSPNYG00000021738	sall4	100	70.000	Pundamilia_nyererei
ENSXMAG00000012692	sall4	99	59.675	ENSPNAG00000020929	sall4	99	60.417	Pygocentrus_nattereri
ENSXMAG00000012692	sall4	100	40.455	ENSRNOG00000050035	Sall4	100	40.541	Rattus_norvegicus
ENSXMAG00000012692	sall4	100	41.274	ENSRBIG00000039876	SALL4	100	41.572	Rhinopithecus_bieti
ENSXMAG00000012692	sall4	100	41.361	ENSRROG00000036585	SALL4	100	41.572	Rhinopithecus_roxellana
ENSXMAG00000012692	sall4	100	42.115	ENSSBOG00000030011	SALL4	75	67.308	Saimiri_boliviensis_boliviensis
ENSXMAG00000012692	sall4	96	65.385	ENSSHAG00000018013	SALL4	88	65.385	Sarcophilus_harrisii
ENSXMAG00000012692	sall4	100	56.730	ENSSFOG00015021075	sall4	100	57.156	Scleropages_formosus
ENSXMAG00000012692	sall4	100	71.324	ENSSMAG00000019218	sall4	99	71.795	Scophthalmus_maximus
ENSXMAG00000012692	sall4	100	72.993	ENSSDUG00000004657	sall4	100	72.354	Seriola_dumerili
ENSXMAG00000012692	sall4	100	71.715	ENSSLDG00000004973	sall4	100	71.989	Seriola_lalandi_dorsalis
ENSXMAG00000012692	sall4	100	72.319	ENSSPAG00000001978	sall4	100	71.586	Stegastes_partitus
ENSXMAG00000012692	sall4	100	42.105	ENSSSCG00000007479	SALL4	100	41.754	Sus_scrofa
ENSXMAG00000012692	sall4	100	67.945	ENSTRUG00000007410	sall4	100	67.854	Takifugu_rubripes
ENSXMAG00000012692	sall4	100	65.782	ENSTNIG00000012460	sall4	100	66.148	Tetraodon_nigroviridis
ENSXMAG00000012692	sall4	97	41.286	ENSTTRG00000007753	SALL4	99	41.193	Tursiops_truncatus
ENSXMAG00000012692	sall4	100	41.842	ENSUAMG00000010113	SALL4	100	41.419	Ursus_americanus
ENSXMAG00000012692	sall4	96	42.140	ENSUMAG00000024274	SALL4	97	41.513	Ursus_maritimus
ENSXMAG00000012692	sall4	100	45.545	ENSXETG00000012326	sall4	100	45.455	Xenopus_tropicalis
ENSXMAG00000012692	sall4	100	98.071	ENSXCOG00000015467	sall4	100	98.071	Xiphophorus_couchianus