EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000012936 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 860 bases
Position: chr3:716494-717353
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000012959	zf-C2H2	PF00096.26	5.3e-25	1	4
ENSXMAP00000012959	zf-C2H2	PF00096.26	5.3e-25	2	4
ENSXMAP00000012959	zf-C2H2	PF00096.26	5.3e-25	3	4
ENSXMAP00000012959	zf-C2H2	PF00096.26	5.3e-25	4	4
ENSXMAP00000012959	zf-met	PF12874.7	6e-15	1	3
ENSXMAP00000012959	zf-met	PF12874.7	6e-15	2	3
ENSXMAP00000012959	zf-met	PF12874.7	6e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000012975	-	645	-	ENSXMAP00000012959	214 (aa)	-	M4AER5

Gene Model

Click here to download ENSXMAG00000012936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000012936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000012936	-	75	31.429	ENSAPOG00000012437	-	81	31.429	Acanthochromis_polyacanthus
ENSXMAG00000012936	-	79	43.860	ENSAPOG00000019138	-	54	43.860	Acanthochromis_polyacanthus
ENSXMAG00000012936	-	87	38.053	ENSACIG00000017892	-	69	38.053	Amphilophus_citrinellus
ENSXMAG00000012936	-	76	32.692	ENSACIG00000006826	-	56	35.135	Amphilophus_citrinellus
ENSXMAG00000012936	-	74	43.704	ENSACIG00000007464	-	50	43.704	Amphilophus_citrinellus
ENSXMAG00000012936	-	87	56.069	ENSAOCG00000001325	-	74	56.069	Amphiprion_ocellaris
ENSXMAG00000012936	-	74	30.822	ENSAOCG00000006744	-	88	30.822	Amphiprion_ocellaris
ENSXMAG00000012936	-	79	40.909	ENSAOCG00000016897	-	63	40.909	Amphiprion_ocellaris
ENSXMAG00000012936	-	83	36.364	ENSAPEG00000010013	-	62	36.364	Amphiprion_percula
ENSXMAG00000012936	-	74	33.140	ENSAPEG00000015714	-	70	33.140	Amphiprion_percula
ENSXMAG00000012936	-	79	38.824	ENSAPEG00000001556	-	62	38.824	Amphiprion_percula
ENSXMAG00000012936	-	86	50.242	ENSATEG00000018931	-	85	57.738	Anabas_testudineus
ENSXMAG00000012936	-	59	41.333	ENSACLG00000019154	-	80	41.333	Astatotilapia_calliptera
ENSXMAG00000012936	-	75	41.414	ENSACLG00000011658	-	86	41.414	Astatotilapia_calliptera
ENSXMAG00000012936	-	82	33.898	ENSACLG00000005694	-	53	33.898	Astatotilapia_calliptera
ENSXMAG00000012936	-	77	40.000	ENSCING00000002128	zf(c2h2)-35	62	40.000	Ciona_intestinalis
ENSXMAG00000012936	-	71	37.963	ENSCSEG00000010264	-	65	37.963	Cynoglossus_semilaevis
ENSXMAG00000012936	-	75	43.519	ENSCSEG00000010453	-	54	43.519	Cynoglossus_semilaevis
ENSXMAG00000012936	-	75	41.667	ENSCVAG00000012682	-	78	41.667	Cyprinodon_variegatus
ENSXMAG00000012936	-	82	71.831	ENSCVAG00000003250	-	63	76.000	Cyprinodon_variegatus
ENSXMAG00000012936	-	75	43.373	ENSCVAG00000020141	-	56	43.373	Cyprinodon_variegatus
ENSXMAG00000012936	-	86	34.715	ENSCVAG00000015616	-	83	34.715	Cyprinodon_variegatus
ENSXMAG00000012936	-	74	36.782	ENSEBUG00000007931	-	62	39.474	Eptatretus_burgeri
ENSXMAG00000012936	-	83	46.316	ENSELUG00000024007	-	67	46.316	Esox_lucius
ENSXMAG00000012936	-	89	34.091	ENSELUG00000001909	-	51	34.091	Esox_lucius
ENSXMAG00000012936	-	83	37.349	ENSGAFG00000008204	-	66	37.349	Gambusia_affinis
ENSXMAG00000012936	-	82	35.526	ENSGAFG00000001879	-	67	35.526	Gambusia_affinis
ENSXMAG00000012936	-	82	33.898	ENSHBUG00000006656	-	65	33.898	Haplochromis_burtoni
ENSXMAG00000012936	-	76	46.094	ENSHCOG00000013489	-	89	46.094	Hippocampus_comes
ENSXMAG00000012936	-	77	40.876	ENSHCOG00000015497	-	75	45.000	Hippocampus_comes
ENSXMAG00000012936	-	76	41.985	ENSHCOG00000008550	-	52	41.985	Hippocampus_comes
ENSXMAG00000012936	-	76	41.985	ENSHCOG00000001873	-	52	41.985	Hippocampus_comes
ENSXMAG00000012936	-	75	36.232	ENSIPUG00000024004	-	74	36.232	Ictalurus_punctatus
ENSXMAG00000012936	-	84	31.694	ENSKMAG00000007699	-	64	32.061	Kryptolebias_marmoratus
ENSXMAG00000012936	-	76	41.860	ENSLBEG00000006161	-	82	40.351	Labrus_bergylta
ENSXMAG00000012936	-	76	39.884	ENSLBEG00000007106	-	75	39.884	Labrus_bergylta
ENSXMAG00000012936	-	84	60.556	ENSLBEG00000001132	-	80	60.556	Labrus_bergylta
ENSXMAG00000012936	-	73	44.000	ENSLBEG00000011210	-	53	44.000	Labrus_bergylta
ENSXMAG00000012936	-	82	56.633	ENSMAMG00000017939	-	78	61.404	Mastacembelus_armatus
ENSXMAG00000012936	-	75	34.146	ENSMZEG00005013907	-	76	38.053	Maylandia_zebra
ENSXMAG00000012936	-	78	48.780	ENSMALG00000004279	-	86	54.268	Monopterus_albus
ENSXMAG00000012936	-	85	38.889	ENSORLG00000002268	-	90	38.889	Oryzias_latipes
ENSXMAG00000012936	-	86	37.079	ENSORLG00000021885	-	68	34.804	Oryzias_latipes
ENSXMAG00000012936	-	92	41.346	ENSORLG00020019227	-	51	41.346	Oryzias_latipes_hni
ENSXMAG00000012936	-	79	35.976	ENSORLG00020018921	-	70	35.976	Oryzias_latipes_hni
ENSXMAG00000012936	-	74	34.302	ENSORLG00015018099	-	62	34.302	Oryzias_latipes_hsok
ENSXMAG00000012936	-	86	33.155	ENSOMEG00000005578	-	82	33.155	Oryzias_melastigma
ENSXMAG00000012936	-	81	35.938	ENSPMGG00000002455	-	92	33.333	Periophthalmus_magnuspinnatus
ENSXMAG00000012936	-	75	43.396	ENSPMGG00000002661	-	64	43.396	Periophthalmus_magnuspinnatus
ENSXMAG00000012936	-	80	47.934	ENSPMGG00000009571	-	75	47.934	Periophthalmus_magnuspinnatus
ENSXMAG00000012936	-	76	43.820	ENSPMGG00000007051	-	65	40.523	Periophthalmus_magnuspinnatus
ENSXMAG00000012936	-	75	38.095	ENSPMGG00000019750	-	81	38.095	Periophthalmus_magnuspinnatus
ENSXMAG00000012936	-	76	42.991	ENSPMGG00000002659	-	69	42.991	Periophthalmus_magnuspinnatus
ENSXMAG00000012936	-	90	35.870	ENSPMAG00000004189	-	96	35.870	Petromyzon_marinus
ENSXMAG00000012936	-	79	35.455	ENSPMAG00000002022	-	100	35.455	Petromyzon_marinus
ENSXMAG00000012936	-	73	40.426	ENSPFOG00000009491	-	53	40.426	Poecilia_formosa
ENSXMAG00000012936	-	82	80.597	ENSPFOG00000018860	-	99	83.529	Poecilia_formosa
ENSXMAG00000012936	-	95	80.165	ENSPLAG00000008941	-	98	73.967	Poecilia_latipinna
ENSXMAG00000012936	-	95	95.588	ENSPLAG00000014832	-	97	95.588	Poecilia_latipinna
ENSXMAG00000012936	-	75	43.307	ENSPLAG00000010067	-	59	43.307	Poecilia_latipinna
ENSXMAG00000012936	-	95	95.588	ENSPMEG00000005210	-	97	95.588	Poecilia_mexicana
ENSXMAG00000012936	-	82	44.706	ENSPMEG00000024117	-	53	40.426	Poecilia_mexicana
ENSXMAG00000012936	-	75	39.130	ENSPREG00000009488	-	91	39.130	Poecilia_reticulata
ENSXMAG00000012936	-	90	34.426	ENSPNYG00000017888	-	60	37.615	Pundamilia_nyererei
ENSXMAG00000012936	-	76	32.680	ENSPNAG00000005946	-	88	32.680	Pygocentrus_nattereri
ENSXMAG00000012936	-	77	40.909	ENSSFOG00015011531	-	91	43.023	Scleropages_formosus
ENSXMAG00000012936	-	89	37.647	ENSSMAG00000013291	-	94	40.000	Scophthalmus_maximus
ENSXMAG00000012936	-	59	43.662	ENSSMAG00000004259	-	55	43.662	Scophthalmus_maximus
ENSXMAG00000012936	-	78	35.758	ENSSPAG00000011544	-	55	35.758	Stegastes_partitus
ENSXMAG00000012936	-	78	36.283	ENSSPAG00000011533	-	84	35.897	Stegastes_partitus
ENSXMAG00000012936	-	83	40.000	ENSXETG00000012506	znf91	99	39.844	Xenopus_tropicalis
ENSXMAG00000012936	-	62	60.588	ENSXCOG00000020768	-	80	56.085	Xiphophorus_couchianus
ENSXMAG00000012936	-	81	33.735	ENSXCOG00000003441	-	61	33.735	Xiphophorus_couchianus