EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013062 (Gene tree)
Gene ID: 102226865
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9804 bases
Position: chr17:72564-82367
Accession: 102226865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013108	Xpo1	PF08389.12	1.6e-27	1	1
ENSXMAP00000013108	IBN_N	PF03810.19	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013124	-	3568	XM_005813729	ENSXMAP00000013108	923 (aa)	XP_005813786	M4AF64

Gene Model

Click here to download ENSXMAG00000013062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013062's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013062	tnpo3	100	85.374	ENSG00000064419	TNPO3	100	85.374	Homo_sapiens
ENSXMAG00000013062	tnpo3	100	94.691	ENSAPOG00000018347	tnpo3	100	94.691	Acanthochromis_polyacanthus
ENSXMAG00000013062	tnpo3	99	82.353	ENSAMEG00000005135	TNPO3	98	82.353	Ailuropoda_melanoleuca
ENSXMAG00000013062	tnpo3	96	91.348	ENSACIG00000005897	tnpo3	100	91.348	Amphilophus_citrinellus
ENSXMAG00000013062	tnpo3	100	94.800	ENSAOCG00000008264	tnpo3	100	94.800	Amphiprion_ocellaris
ENSXMAG00000013062	tnpo3	96	94.904	ENSAPEG00000024300	tnpo3	100	94.904	Amphiprion_percula
ENSXMAG00000013062	tnpo3	100	93.933	ENSATEG00000003197	tnpo3	100	93.933	Anabas_testudineus
ENSXMAG00000013062	tnpo3	72	82.459	ENSAPLG00000005946	TNPO3	91	82.459	Anas_platyrhynchos
ENSXMAG00000013062	tnpo3	82	85.132	ENSACAG00000013470	TNPO3	95	85.132	Anolis_carolinensis
ENSXMAG00000013062	tnpo3	100	85.374	ENSANAG00000037940	TNPO3	100	85.374	Aotus_nancymaae
ENSXMAG00000013062	tnpo3	100	93.608	ENSACLG00000005561	tnpo3	100	93.608	Astatotilapia_calliptera
ENSXMAG00000013062	tnpo3	100	91.983	ENSAMXG00000016236	tnpo3	100	91.983	Astyanax_mexicanus
ENSXMAG00000013062	tnpo3	100	85.482	ENSBTAG00000004992	TNPO3	100	85.482	Bos_taurus
ENSXMAG00000013062	tnpo3	100	85.482	ENSCJAG00000018085	TNPO3	100	85.482	Callithrix_jacchus
ENSXMAG00000013062	tnpo3	100	85.374	ENSCAFG00000001543	TNPO3	100	85.374	Canis_familiaris
ENSXMAG00000013062	tnpo3	100	85.374	ENSCAFG00020022462	TNPO3	99	84.973	Canis_lupus_dingo
ENSXMAG00000013062	tnpo3	100	85.590	ENSCHIG00000011721	TNPO3	100	85.590	Capra_hircus
ENSXMAG00000013062	tnpo3	100	85.482	ENSTSYG00000002989	TNPO3	100	85.482	Carlito_syrichta
ENSXMAG00000013062	tnpo3	72	81.720	ENSCAPG00000005843	TNPO3	91	81.720	Cavia_aperea
ENSXMAG00000013062	tnpo3	100	84.832	ENSCPOG00000039784	TNPO3	100	84.832	Cavia_porcellus
ENSXMAG00000013062	tnpo3	100	85.482	ENSCCAG00000033826	TNPO3	100	85.482	Cebus_capucinus
ENSXMAG00000013062	tnpo3	100	85.374	ENSCATG00000030018	TNPO3	100	85.374	Cercocebus_atys
ENSXMAG00000013062	tnpo3	100	84.250	ENSCLAG00000016298	TNPO3	100	84.250	Chinchilla_lanigera
ENSXMAG00000013062	tnpo3	100	85.482	ENSCSAG00000009966	TNPO3	100	85.482	Chlorocebus_sabaeus
ENSXMAG00000013062	tnpo3	99	60.778	ENSCHOG00000011547	TNPO3	99	60.778	Choloepus_hoffmanni
ENSXMAG00000013062	tnpo3	93	84.247	ENSCPBG00000017497	TNPO3	100	84.247	Chrysemys_picta_bellii
ENSXMAG00000013062	tnpo3	99	48.584	ENSCING00000005042	-	99	48.584	Ciona_intestinalis
ENSXMAG00000013062	tnpo3	99	47.661	ENSCSAVG00000008623	-	95	53.791	Ciona_savignyi
ENSXMAG00000013062	tnpo3	100	85.374	ENSCANG00000033070	TNPO3	100	85.374	Colobus_angolensis_palliatus
ENSXMAG00000013062	tnpo3	100	85.265	ENSCGRG00001015925	Tnpo3	100	85.265	Cricetulus_griseus_chok1gshd
ENSXMAG00000013062	tnpo3	100	85.265	ENSCGRG00000010379	Tnpo3	100	85.265	Cricetulus_griseus_crigri
ENSXMAG00000013062	tnpo3	100	91.658	ENSCSEG00000005952	tnpo3	100	91.658	Cynoglossus_semilaevis
ENSXMAG00000013062	tnpo3	100	96.425	ENSCVAG00000020285	tnpo3	100	96.425	Cyprinodon_variegatus
ENSXMAG00000013062	tnpo3	100	90.466	ENSDARG00000045680	tnpo3	100	90.466	Danio_rerio
ENSXMAG00000013062	tnpo3	100	85.265	ENSDNOG00000002556	TNPO3	100	85.265	Dasypus_novemcinctus
ENSXMAG00000013062	tnpo3	62	84.629	ENSDORG00000002433	Tnpo3	95	84.629	Dipodomys_ordii
ENSXMAG00000013062	tnpo3	99	42.949	FBgn0031456	Tnpo-SR	99	42.949	Drosophila_melanogaster
ENSXMAG00000013062	tnpo3	95	85.714	ENSETEG00000002101	TNPO3	90	85.714	Echinops_telfairi
ENSXMAG00000013062	tnpo3	99	70.217	ENSEBUG00000016931	tnpo3	99	70.217	Eptatretus_burgeri
ENSXMAG00000013062	tnpo3	100	85.265	ENSEASG00005008677	TNPO3	100	85.265	Equus_asinus_asinus
ENSXMAG00000013062	tnpo3	100	85.265	ENSECAG00000012815	TNPO3	100	85.265	Equus_caballus
ENSXMAG00000013062	tnpo3	99	80.106	ENSEEUG00000005178	TNPO3	98	80.106	Erinaceus_europaeus
ENSXMAG00000013062	tnpo3	60	31.280	ENSEEUG00000011681	IPO13	72	31.280	Erinaceus_europaeus
ENSXMAG00000013062	tnpo3	99	91.404	ENSELUG00000012153	tnpo3	99	91.404	Esox_lucius
ENSXMAG00000013062	tnpo3	100	85.374	ENSFCAG00000018186	TNPO3	100	85.374	Felis_catus
ENSXMAG00000013062	tnpo3	95	80.447	ENSFALG00000010667	TNPO3	99	80.447	Ficedula_albicollis
ENSXMAG00000013062	tnpo3	100	84.865	ENSFDAG00000019578	TNPO3	100	84.865	Fukomys_damarensis
ENSXMAG00000013062	tnpo3	99	96.413	ENSFHEG00000012859	tnpo3	99	96.413	Fundulus_heteroclitus
ENSXMAG00000013062	tnpo3	100	91.333	ENSGMOG00000007324	tnpo3	100	91.333	Gadus_morhua
ENSXMAG00000013062	tnpo3	61	84.629	ENSGALG00000039420	TNPO3	99	84.629	Gallus_gallus
ENSXMAG00000013062	tnpo3	100	93.499	ENSGACG00000000699	tnpo3	100	93.499	Gasterosteus_aculeatus
ENSXMAG00000013062	tnpo3	93	84.131	ENSGAGG00000006777	TNPO3	100	84.131	Gopherus_agassizii
ENSXMAG00000013062	tnpo3	100	85.374	ENSGGOG00000008339	TNPO3	100	85.374	Gorilla_gorilla
ENSXMAG00000013062	tnpo3	100	93.608	ENSHBUG00000008351	tnpo3	100	93.608	Haplochromis_burtoni
ENSXMAG00000013062	tnpo3	100	85.265	ENSHGLG00000004463	TNPO3	100	85.265	Heterocephalus_glaber_female
ENSXMAG00000013062	tnpo3	100	85.265	ENSHGLG00100005509	TNPO3	100	85.265	Heterocephalus_glaber_male
ENSXMAG00000013062	tnpo3	100	91.983	ENSHCOG00000007221	tnpo3	100	91.983	Hippocampus_comes
ENSXMAG00000013062	tnpo3	100	89.274	ENSIPUG00000014979	TNPO3	99	89.274	Ictalurus_punctatus
ENSXMAG00000013062	tnpo3	100	85.265	ENSSTOG00000004885	TNPO3	100	85.265	Ictidomys_tridecemlineatus
ENSXMAG00000013062	tnpo3	100	79.462	ENSJJAG00000013530	Tnpo3	100	79.462	Jaculus_jaculus
ENSXMAG00000013062	tnpo3	100	95.666	ENSKMAG00000010497	tnpo3	100	95.666	Kryptolebias_marmoratus
ENSXMAG00000013062	tnpo3	96	88.448	ENSLBEG00000011988	-	99	88.448	Labrus_bergylta
ENSXMAG00000013062	tnpo3	96	90.600	ENSLBEG00000016595	tnpo3	100	90.600	Labrus_bergylta
ENSXMAG00000013062	tnpo3	83	86.177	ENSLACG00000002351	TNPO3	99	86.177	Latimeria_chalumnae
ENSXMAG00000013062	tnpo3	100	89.707	ENSLOCG00000015556	tnpo3	100	89.707	Lepisosteus_oculatus
ENSXMAG00000013062	tnpo3	100	84.682	ENSLAFG00000002738	TNPO3	100	84.682	Loxodonta_africana
ENSXMAG00000013062	tnpo3	100	85.374	ENSMFAG00000032385	TNPO3	100	85.374	Macaca_fascicularis
ENSXMAG00000013062	tnpo3	100	85.374	ENSMMUG00000004311	TNPO3	100	85.374	Macaca_mulatta
ENSXMAG00000013062	tnpo3	100	85.374	ENSMNEG00000045277	TNPO3	100	85.374	Macaca_nemestrina
ENSXMAG00000013062	tnpo3	100	85.374	ENSMLEG00000037881	TNPO3	100	85.374	Mandrillus_leucophaeus
ENSXMAG00000013062	tnpo3	100	94.150	ENSMAMG00000021096	tnpo3	100	94.150	Mastacembelus_armatus
ENSXMAG00000013062	tnpo3	100	93.608	ENSMZEG00005015084	tnpo3	100	93.608	Maylandia_zebra
ENSXMAG00000013062	tnpo3	78	80.690	ENSMGAG00000002839	TNPO3	99	80.690	Meleagris_gallopavo
ENSXMAG00000013062	tnpo3	100	85.157	ENSMAUG00000013463	Tnpo3	100	85.157	Mesocricetus_auratus
ENSXMAG00000013062	tnpo3	100	85.374	ENSMICG00000000140	TNPO3	100	85.374	Microcebus_murinus
ENSXMAG00000013062	tnpo3	89	33.846	ENSMICG00000011003	IPO13	97	34.320	Microcebus_murinus
ENSXMAG00000013062	tnpo3	100	85.265	ENSMOCG00000013264	Tnpo3	100	85.265	Microtus_ochrogaster
ENSXMAG00000013062	tnpo3	100	93.174	ENSMMOG00000005887	tnpo3	100	93.174	Mola_mola
ENSXMAG00000013062	tnpo3	100	85.590	ENSMODG00000014700	TNPO3	100	85.590	Monodelphis_domestica
ENSXMAG00000013062	tnpo3	100	93.933	ENSMALG00000006675	tnpo3	100	93.933	Monopterus_albus
ENSXMAG00000013062	tnpo3	100	85.049	MGP_CAROLIEiJ_G0028176	Tnpo3	100	85.049	Mus_caroli
ENSXMAG00000013062	tnpo3	100	85.049	ENSMUSG00000012535	Tnpo3	100	85.049	Mus_musculus
ENSXMAG00000013062	tnpo3	100	85.157	MGP_PahariEiJ_G0021934	Tnpo3	100	85.157	Mus_pahari
ENSXMAG00000013062	tnpo3	100	84.940	MGP_SPRETEiJ_G0029176	Tnpo3	100	84.940	Mus_spretus
ENSXMAG00000013062	tnpo3	100	85.374	ENSMPUG00000006021	TNPO3	100	85.374	Mustela_putorius_furo
ENSXMAG00000013062	tnpo3	100	76.815	ENSMLUG00000000947	TNPO3	100	76.815	Myotis_lucifugus
ENSXMAG00000013062	tnpo3	100	85.265	ENSNGAG00000008722	Tnpo3	100	85.265	Nannospalax_galili
ENSXMAG00000013062	tnpo3	100	92.091	ENSNBRG00000019001	tnpo3	100	93.574	Neolamprologus_brichardi
ENSXMAG00000013062	tnpo3	100	82.236	ENSNLEG00000012491	TNPO3	100	85.288	Nomascus_leucogenys
ENSXMAG00000013062	tnpo3	99	65.481	ENSMEUG00000002445	TNPO3	91	71.537	Notamacropus_eugenii
ENSXMAG00000013062	tnpo3	91	85.326	ENSOPRG00000006163	TNPO3	90	85.326	Ochotona_princeps
ENSXMAG00000013062	tnpo3	98	85.033	ENSODEG00000012826	TNPO3	100	85.033	Octodon_degus
ENSXMAG00000013062	tnpo3	100	94.150	ENSONIG00000007604	tnpo3	100	94.150	Oreochromis_niloticus
ENSXMAG00000013062	tnpo3	95	82.155	ENSOANG00000011451	TNPO3	99	82.155	Ornithorhynchus_anatinus
ENSXMAG00000013062	tnpo3	99	82.353	ENSOCUG00000010105	TNPO3	99	82.353	Oryctolagus_cuniculus
ENSXMAG00000013062	tnpo3	100	92.741	ENSORLG00000029369	tnpo3	100	92.741	Oryzias_latipes
ENSXMAG00000013062	tnpo3	100	92.741	ENSORLG00020003464	tnpo3	100	92.741	Oryzias_latipes_hni
ENSXMAG00000013062	tnpo3	100	92.849	ENSORLG00015002610	tnpo3	100	92.849	Oryzias_latipes_hsok
ENSXMAG00000013062	tnpo3	100	92.849	ENSOMEG00000021006	tnpo3	100	92.849	Oryzias_melastigma
ENSXMAG00000013062	tnpo3	100	85.265	ENSOGAG00000015340	TNPO3	100	85.265	Otolemur_garnettii
ENSXMAG00000013062	tnpo3	100	85.590	ENSOARG00000004026	TNPO3	100	85.590	Ovis_aries
ENSXMAG00000013062	tnpo3	100	85.374	ENSPPAG00000034975	TNPO3	100	85.374	Pan_paniscus
ENSXMAG00000013062	tnpo3	100	85.374	ENSPPRG00000002050	TNPO3	100	85.374	Panthera_pardus
ENSXMAG00000013062	tnpo3	100	85.374	ENSPTIG00000016167	TNPO3	100	85.374	Panthera_tigris_altaica
ENSXMAG00000013062	tnpo3	100	85.374	ENSPTRG00000019676	TNPO3	100	85.374	Pan_troglodytes
ENSXMAG00000013062	tnpo3	98	85.304	ENSPANG00000022226	TNPO3	100	85.288	Papio_anubis
ENSXMAG00000013062	tnpo3	100	84.233	ENSPKIG00000008628	-	100	84.233	Paramormyrops_kingsleyae
ENSXMAG00000013062	tnpo3	100	87.974	ENSPKIG00000023234	tnpo3	100	87.974	Paramormyrops_kingsleyae
ENSXMAG00000013062	tnpo3	62	86.972	ENSPMGG00000009763	tnpo3	99	86.972	Periophthalmus_magnuspinnatus
ENSXMAG00000013062	tnpo3	100	85.157	ENSPEMG00000000422	Tnpo3	100	85.157	Peromyscus_maniculatus_bairdii
ENSXMAG00000013062	tnpo3	95	71.461	ENSPMAG00000008621	tnpo3	100	71.461	Petromyzon_marinus
ENSXMAG00000013062	tnpo3	100	85.265	ENSPCIG00000011366	TNPO3	100	85.265	Phascolarctos_cinereus
ENSXMAG00000013062	tnpo3	100	99.458	ENSPFOG00000013592	tnpo3	99	99.458	Poecilia_formosa
ENSXMAG00000013062	tnpo3	100	99.458	ENSPLAG00000010188	tnpo3	100	99.458	Poecilia_latipinna
ENSXMAG00000013062	tnpo3	100	99.567	ENSPMEG00000022731	tnpo3	100	99.567	Poecilia_mexicana
ENSXMAG00000013062	tnpo3	100	85.374	ENSPPYG00000017990	TNPO3	100	85.374	Pongo_abelii
ENSXMAG00000013062	tnpo3	99	76.285	ENSPCAG00000010158	TNPO3	98	76.285	Procavia_capensis
ENSXMAG00000013062	tnpo3	87	85.526	ENSPCOG00000023901	TNPO3	96	85.526	Propithecus_coquereli
ENSXMAG00000013062	tnpo3	99	79.412	ENSPVAG00000015757	TNPO3	98	79.412	Pteropus_vampyrus
ENSXMAG00000013062	tnpo3	100	93.608	ENSPNYG00000002349	tnpo3	100	93.608	Pundamilia_nyererei
ENSXMAG00000013062	tnpo3	100	91.549	ENSPNAG00000001142	tnpo3	100	91.549	Pygocentrus_nattereri
ENSXMAG00000013062	tnpo3	100	84.940	ENSRNOG00000021758	Tnpo3	100	84.940	Rattus_norvegicus
ENSXMAG00000013062	tnpo3	100	85.374	ENSRBIG00000042549	TNPO3	100	85.374	Rhinopithecus_bieti
ENSXMAG00000013062	tnpo3	100	85.374	ENSRROG00000039264	TNPO3	100	85.374	Rhinopithecus_roxellana
ENSXMAG00000013062	tnpo3	93	77.734	ENSSBOG00000029642	TNPO3	100	77.734	Saimiri_boliviensis_boliviensis
ENSXMAG00000013062	tnpo3	95	85.585	ENSSHAG00000006837	TNPO3	99	85.585	Sarcophilus_harrisii
ENSXMAG00000013062	tnpo3	100	88.082	ENSSFOG00015001474	tnpo3	100	88.082	Scleropages_formosus
ENSXMAG00000013062	tnpo3	100	83.226	ENSSFOG00015004256	tnpo3	100	83.226	Scleropages_formosus
ENSXMAG00000013062	tnpo3	100	93.608	ENSSMAG00000010422	tnpo3	97	93.608	Scophthalmus_maximus
ENSXMAG00000013062	tnpo3	100	94.366	ENSSDUG00000004850	tnpo3	100	94.366	Seriola_dumerili
ENSXMAG00000013062	tnpo3	100	94.366	ENSSLDG00000016927	tnpo3	100	94.366	Seriola_lalandi_dorsalis
ENSXMAG00000013062	tnpo3	95	74.201	ENSSARG00000013893	TNPO3	98	74.201	Sorex_araneus
ENSXMAG00000013062	tnpo3	99	81.020	ENSSPUG00000007457	TNPO3	99	81.061	Sphenodon_punctatus
ENSXMAG00000013062	tnpo3	79	95.730	ENSSPAG00000014209	tnpo3	99	95.730	Stegastes_partitus
ENSXMAG00000013062	tnpo3	100	85.374	ENSSSCG00000016572	TNPO3	100	85.374	Sus_scrofa
ENSXMAG00000013062	tnpo3	100	91.901	ENSTNIG00000003347	tnpo3	100	91.901	Tetraodon_nigroviridis
ENSXMAG00000013062	tnpo3	88	83.819	ENSTBEG00000007220	TNPO3	90	83.819	Tupaia_belangeri
ENSXMAG00000013062	tnpo3	99	73.109	ENSTTRG00000014618	TNPO3	98	73.109	Tursiops_truncatus
ENSXMAG00000013062	tnpo3	100	85.374	ENSUAMG00000021281	TNPO3	100	85.374	Ursus_americanus
ENSXMAG00000013062	tnpo3	100	85.374	ENSUMAG00000006882	TNPO3	100	85.374	Ursus_maritimus
ENSXMAG00000013062	tnpo3	85	72.261	ENSVPAG00000006166	TNPO3	88	72.261	Vicugna_pacos
ENSXMAG00000013062	tnpo3	100	85.374	ENSVVUG00000011004	TNPO3	100	90.244	Vulpes_vulpes
ENSXMAG00000013062	tnpo3	99	76.706	ENSXETG00000015009	tnpo3	99	76.706	Xenopus_tropicalis