EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013125 (Gene tree)
Gene ID: 102221516
Gene Symbol: tyw1
Alias: im:6898509|wu:fb74d01|zgc:153368
Full Name: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 41882 bases
Position: chr18:3082418-3124299
Accession: 102221516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013155	Wyosine_form	PF08608.12	1.8e-27	1	1
ENSXMAP00000038574	Wyosine_form	PF08608.12	2.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000029150	-	3057	XM_023351799	ENSXMAP00000038574	745 (aa)	XP_023207567	UPI000C6E51CB
ENSXMAT00000013171	-	1875	-	ENSXMAP00000013155	624 (aa)	-	M4AFB1

Gene Model

Click here to download ENSXMAG00000013125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013125	tyw1	100	67.604	ENSG00000198874	TYW1	99	65.989	Homo_sapiens
ENSXMAG00000013125	tyw1	95	61.586	ENSG00000277149	TYW1B	93	63.190	Homo_sapiens
ENSXMAG00000013125	tyw1	100	82.133	ENSAPOG00000014391	tyw1	100	80.267	Acanthochromis_polyacanthus
ENSXMAG00000013125	tyw1	98	79.141	ENSACIG00000007325	tyw1	100	76.731	Amphilophus_citrinellus
ENSXMAG00000013125	tyw1	100	81.758	ENSAOCG00000016792	tyw1	100	80.027	Amphiprion_ocellaris
ENSXMAG00000013125	tyw1	100	82.157	ENSAPEG00000015939	tyw1	100	80.426	Amphiprion_percula
ENSXMAG00000013125	tyw1	90	77.827	ENSATEG00000006856	tyw1	94	76.799	Anabas_testudineus
ENSXMAG00000013125	tyw1	100	67.604	ENSANAG00000037051	-	99	66.304	Aotus_nancymaae
ENSXMAG00000013125	tyw1	100	79.200	ENSACLG00000018688	tyw1	100	77.807	Astatotilapia_calliptera
ENSXMAG00000013125	tyw1	98	76.606	ENSAMXG00000004157	tyw1	99	75.589	Astyanax_mexicanus
ENSXMAG00000013125	tyw1	100	68.053	ENSBTAG00000008446	TYW1	99	66.712	Bos_taurus
ENSXMAG00000013125	tyw1	100	67.012	ENSCJAG00000004295	-	99	65.986	Callithrix_jacchus
ENSXMAG00000013125	tyw1	99	69.552	ENSCAFG00000010867	-	99	66.164	Canis_familiaris
ENSXMAG00000013125	tyw1	99	62.462	ENSCAFG00020005367	-	96	63.692	Canis_lupus_dingo
ENSXMAG00000013125	tyw1	98	69.499	ENSCHIG00000019510	-	99	66.712	Capra_hircus
ENSXMAG00000013125	tyw1	86	68.761	ENSTSYG00000008236	-	99	66.515	Carlito_syrichta
ENSXMAG00000013125	tyw1	94	60.849	ENSCAPG00000013569	-	100	63.240	Cavia_aperea
ENSXMAG00000013125	tyw1	100	65.198	ENSCPOG00000011182	-	98	64.344	Cavia_porcellus
ENSXMAG00000013125	tyw1	100	67.704	ENSCCAG00000026643	-	99	66.803	Cebus_capucinus
ENSXMAG00000013125	tyw1	100	67.556	ENSCATG00000043677	-	99	65.903	Cercocebus_atys
ENSXMAG00000013125	tyw1	100	66.222	ENSCLAG00000006321	-	98	64.932	Chinchilla_lanigera
ENSXMAG00000013125	tyw1	98	64.865	ENSCSAG00000018274	-	99	64.865	Chlorocebus_sabaeus
ENSXMAG00000013125	tyw1	52	82.479	ENSCHOG00000003801	-	56	82.479	Choloepus_hoffmanni
ENSXMAG00000013125	tyw1	100	72.354	ENSCPBG00000014896	-	99	65.000	Chrysemys_picta_bellii
ENSXMAG00000013125	tyw1	87	60.734	ENSCING00000004125	-	97	61.284	Ciona_intestinalis
ENSXMAG00000013125	tyw1	95	56.956	ENSCSAVG00000005712	-	100	57.800	Ciona_savignyi
ENSXMAG00000013125	tyw1	100	67.751	ENSCANG00000033209	-	99	66.038	Colobus_angolensis_palliatus
ENSXMAG00000013125	tyw1	69	77.570	ENSCGRG00001003679	Tyw1	86	77.570	Cricetulus_griseus_chok1gshd
ENSXMAG00000013125	tyw1	99	78.711	ENSCSEG00000005810	tyw1	98	76.502	Cynoglossus_semilaevis
ENSXMAG00000013125	tyw1	90	83.947	ENSCVAG00000001054	tyw1	96	82.327	Cyprinodon_variegatus
ENSXMAG00000013125	tyw1	98	73.748	ENSDARG00000062987	tyw1	99	72.074	Danio_rerio
ENSXMAG00000013125	tyw1	99	67.660	ENSDNOG00000024165	-	99	66.257	Dasypus_novemcinctus
ENSXMAG00000013125	tyw1	89	61.692	ENSDORG00000014772	Tyw1	93	61.154	Dipodomys_ordii
ENSXMAG00000013125	tyw1	62	74.074	ENSEBUG00000004494	tyw1	91	74.074	Eptatretus_burgeri
ENSXMAG00000013125	tyw1	99	68.358	ENSEASG00005008818	-	98	67.400	Equus_asinus_asinus
ENSXMAG00000013125	tyw1	99	70.161	ENSECAG00000023164	-	98	81.034	Equus_caballus
ENSXMAG00000013125	tyw1	57	81.818	ENSEEUG00000005950	-	53	81.818	Erinaceus_europaeus
ENSXMAG00000013125	tyw1	99	72.280	ENSELUG00000008449	tyw1	100	72.231	Esox_lucius
ENSXMAG00000013125	tyw1	99	70.433	ENSFCAG00000014262	-	99	66.347	Felis_catus
ENSXMAG00000013125	tyw1	98	66.358	ENSFALG00000013810	-	99	63.950	Ficedula_albicollis
ENSXMAG00000013125	tyw1	99	65.185	ENSFDAG00000013270	-	99	63.415	Fukomys_damarensis
ENSXMAG00000013125	tyw1	89	78.431	ENSFHEG00000020824	tyw1	81	83.876	Fundulus_heteroclitus
ENSXMAG00000013125	tyw1	99	66.368	ENSGALG00000001110	-	99	65.676	Gallus_gallus
ENSXMAG00000013125	tyw1	97	76.667	ENSGACG00000012692	tyw1	99	76.022	Gasterosteus_aculeatus
ENSXMAG00000013125	tyw1	100	71.564	ENSGAGG00000022393	-	98	66.758	Gopherus_agassizii
ENSXMAG00000013125	tyw1	88	58.804	ENSGGOG00000001473	TYW1	99	57.594	Gorilla_gorilla
ENSXMAG00000013125	tyw1	100	78.933	ENSHBUG00000002640	tyw1	100	77.540	Haplochromis_burtoni
ENSXMAG00000013125	tyw1	95	70.383	ENSHGLG00000012093	-	100	70.383	Heterocephalus_glaber_female
ENSXMAG00000013125	tyw1	100	66.124	ENSHGLG00100011743	TYW1	99	65.034	Heterocephalus_glaber_male
ENSXMAG00000013125	tyw1	96	75.450	ENSHCOG00000019949	tyw1	99	65.462	Hippocampus_comes
ENSXMAG00000013125	tyw1	98	74.085	ENSIPUG00000016330	tyw1	99	71.562	Ictalurus_punctatus
ENSXMAG00000013125	tyw1	100	66.617	ENSSTOG00000004067	-	91	64.762	Ictidomys_tridecemlineatus
ENSXMAG00000013125	tyw1	98	65.653	ENSJJAG00000022959	Tyw1	98	64.820	Jaculus_jaculus
ENSXMAG00000013125	tyw1	100	81.200	ENSKMAG00000018599	tyw1	100	79.867	Kryptolebias_marmoratus
ENSXMAG00000013125	tyw1	100	62.385	ENSLACG00000018917	tyw1	100	62.516	Latimeria_chalumnae
ENSXMAG00000013125	tyw1	99	72.646	ENSLOCG00000004035	tyw1	95	72.284	Lepisosteus_oculatus
ENSXMAG00000013125	tyw1	100	67.704	ENSMFAG00000035457	-	99	65.903	Macaca_fascicularis
ENSXMAG00000013125	tyw1	100	67.704	ENSMMUG00000030374	-	99	65.903	Macaca_mulatta
ENSXMAG00000013125	tyw1	100	67.704	ENSMNEG00000041992	-	99	70.652	Macaca_nemestrina
ENSXMAG00000013125	tyw1	100	67.704	ENSMLEG00000039741	-	99	66.038	Mandrillus_leucophaeus
ENSXMAG00000013125	tyw1	99	79.911	ENSMAMG00000016089	tyw1	99	77.406	Mastacembelus_armatus
ENSXMAG00000013125	tyw1	99	80.211	ENSMZEG00005024386	tyw1	99	80.560	Maylandia_zebra
ENSXMAG00000013125	tyw1	99	66.270	ENSMGAG00000002176	-	99	65.317	Meleagris_gallopavo
ENSXMAG00000013125	tyw1	98	67.683	ENSMAUG00000002959	Tyw1	99	66.214	Mesocricetus_auratus
ENSXMAG00000013125	tyw1	99	68.405	ENSMICG00000014374	-	99	65.940	Microcebus_murinus
ENSXMAG00000013125	tyw1	98	67.428	ENSMOCG00000017720	Tyw1	99	64.883	Microtus_ochrogaster
ENSXMAG00000013125	tyw1	97	79.608	ENSMMOG00000005064	tyw1	99	72.790	Mola_mola
ENSXMAG00000013125	tyw1	96	65.621	ENSMODG00000025697	-	98	66.667	Monodelphis_domestica
ENSXMAG00000013125	tyw1	99	79.674	ENSMALG00000010238	tyw1	100	77.733	Monopterus_albus
ENSXMAG00000013125	tyw1	99	66.616	MGP_CAROLIEiJ_G0027801	Tyw1	98	66.528	Mus_caroli
ENSXMAG00000013125	tyw1	99	66.616	ENSMUSG00000056310	Tyw1	98	67.455	Mus_musculus
ENSXMAG00000013125	tyw1	99	67.474	MGP_PahariEiJ_G0024383	Tyw1	98	67.131	Mus_pahari
ENSXMAG00000013125	tyw1	99	66.465	MGP_SPRETEiJ_G0028799	Tyw1	98	67.177	Mus_spretus
ENSXMAG00000013125	tyw1	98	69.811	ENSMPUG00000016191	-	95	69.811	Mustela_putorius_furo
ENSXMAG00000013125	tyw1	100	65.051	ENSMLUG00000013582	-	98	64.714	Myotis_lucifugus
ENSXMAG00000013125	tyw1	100	67.922	ENSNGAG00000002742	Tyw1	99	66.391	Nannospalax_galili
ENSXMAG00000013125	tyw1	99	82.764	ENSNBRG00000016996	tyw1	96	82.764	Neolamprologus_brichardi
ENSXMAG00000013125	tyw1	100	67.604	ENSNLEG00000013210	-	98	65.229	Nomascus_leucogenys
ENSXMAG00000013125	tyw1	98	54.863	ENSOPRG00000008734	-	78	65.482	Ochotona_princeps
ENSXMAG00000013125	tyw1	97	61.280	ENSODEG00000014729	-	95	62.481	Octodon_degus
ENSXMAG00000013125	tyw1	100	78.400	ENSONIG00000005872	tyw1	100	77.005	Oreochromis_niloticus
ENSXMAG00000013125	tyw1	100	68.000	ENSOCUG00000003173	-	98	66.391	Oryctolagus_cuniculus
ENSXMAG00000013125	tyw1	98	83.520	ENSORLG00000001393	tyw1	99	76.542	Oryzias_latipes
ENSXMAG00000013125	tyw1	98	83.200	ENSORLG00020019361	tyw1	100	76.273	Oryzias_latipes_hni
ENSXMAG00000013125	tyw1	100	77.674	ENSORLG00015008095	tyw1	99	75.936	Oryzias_latipes_hsok
ENSXMAG00000013125	tyw1	100	67.456	ENSOGAG00000016555	-	94	67.239	Otolemur_garnettii
ENSXMAG00000013125	tyw1	98	69.428	ENSOARG00000010673	-	99	66.396	Ovis_aries
ENSXMAG00000013125	tyw1	99	70.588	ENSPPRG00000004945	-	99	66.988	Panthera_pardus
ENSXMAG00000013125	tyw1	99	70.433	ENSPTIG00000019545	-	99	66.713	Panthera_tigris_altaica
ENSXMAG00000013125	tyw1	100	61.912	ENSPTRG00000023076	TYW1B	98	60.676	Pan_troglodytes
ENSXMAG00000013125	tyw1	100	67.407	ENSPANG00000019053	-	99	65.854	Papio_anubis
ENSXMAG00000013125	tyw1	98	73.611	ENSPKIG00000006545	tyw1	99	69.612	Paramormyrops_kingsleyae
ENSXMAG00000013125	tyw1	100	74.742	ENSPMGG00000004240	tyw1	100	75.426	Periophthalmus_magnuspinnatus
ENSXMAG00000013125	tyw1	99	68.006	ENSPEMG00000008274	Tyw1	99	67.627	Peromyscus_maniculatus_bairdii
ENSXMAG00000013125	tyw1	100	94.000	ENSPFOG00000015855	tyw1	100	94.000	Poecilia_formosa
ENSXMAG00000013125	tyw1	100	93.867	ENSPLAG00000000838	tyw1	100	93.867	Poecilia_latipinna
ENSXMAG00000013125	tyw1	100	93.867	ENSPMEG00000019437	tyw1	100	93.867	Poecilia_mexicana
ENSXMAG00000013125	tyw1	100	87.827	ENSPREG00000018773	tyw1	99	87.176	Poecilia_reticulata
ENSXMAG00000013125	tyw1	100	67.456	ENSPPYG00000017514	TYW1	99	66.079	Pongo_abelii
ENSXMAG00000013125	tyw1	99	54.042	ENSPCOG00000015294	-	99	52.717	Propithecus_coquereli
ENSXMAG00000013125	tyw1	100	79.067	ENSPNYG00000022381	tyw1	100	77.674	Pundamilia_nyererei
ENSXMAG00000013125	tyw1	98	76.212	ENSPNAG00000009001	tyw1	98	75.589	Pygocentrus_nattereri
ENSXMAG00000013125	tyw1	99	67.523	ENSRNOG00000024352	Tyw1	99	66.758	Rattus_norvegicus
ENSXMAG00000013125	tyw1	100	67.259	ENSRBIG00000039619	-	99	66.397	Rhinopithecus_bieti
ENSXMAG00000013125	tyw1	100	67.604	ENSRROG00000039780	-	99	66.038	Rhinopithecus_roxellana
ENSXMAG00000013125	tyw1	96	44.122	YPL207W	-	73	44.122	Saccharomyces_cerevisiae
ENSXMAG00000013125	tyw1	100	67.160	ENSSBOG00000025873	-	99	65.986	Saimiri_boliviensis_boliviensis
ENSXMAG00000013125	tyw1	99	69.266	ENSSHAG00000010346	-	99	66.944	Sarcophilus_harrisii
ENSXMAG00000013125	tyw1	98	73.272	ENSSFOG00015001054	tyw1	100	69.746	Scleropages_formosus
ENSXMAG00000013125	tyw1	99	79.970	ENSSMAG00000020514	tyw1	100	79.866	Scophthalmus_maximus
ENSXMAG00000013125	tyw1	100	81.034	ENSSDUG00000001552	tyw1	98	84.906	Seriola_dumerili
ENSXMAG00000013125	tyw1	100	80.902	ENSSLDG00000003554	tyw1	100	79.973	Seriola_lalandi_dorsalis
ENSXMAG00000013125	tyw1	98	68.847	ENSSPUG00000002715	-	99	64.393	Sphenodon_punctatus
ENSXMAG00000013125	tyw1	100	67.799	ENSSSCG00000007733	-	99	66.079	Sus_scrofa
ENSXMAG00000013125	tyw1	87	69.231	ENSTGUG00000003428	-	99	65.964	Taeniopygia_guttata
ENSXMAG00000013125	tyw1	99	79.217	ENSTRUG00000016107	tyw1	98	76.203	Takifugu_rubripes
ENSXMAG00000013125	tyw1	97	76.426	ENSTNIG00000018999	tyw1	100	80.330	Tetraodon_nigroviridis
ENSXMAG00000013125	tyw1	100	69.278	ENSUMAG00000015343	-	99	68.081	Ursus_maritimus
ENSXMAG00000013125	tyw1	99	69.195	ENSVVUG00000016457	-	99	66.118	Vulpes_vulpes
ENSXMAG00000013125	tyw1	99	70.890	ENSXETG00000010094	tyw1	98	67.541	Xenopus_tropicalis