EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013169 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 5051 bases
Position: chr3:16761748-16766798
Accession: 106699991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013199	RRM_1	PF00076.22	2.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013215	-	1200	XM_023330763	ENSXMAP00000013199	399 (aa)	XP_023186531	M4AFF5

Gene Model

Click here to download ENSXMAG00000013169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013169	-	93	45.570	ENSG00000183808	RBM12B	74	54.098	Homo_sapiens
ENSXMAG00000013169	-	94	41.038	ENSAPOG00000008836	zgc:153215	95	41.038	Acanthochromis_polyacanthus
ENSXMAG00000013169	-	97	37.037	ENSAPOG00000013963	rbm12b	68	37.037	Acanthochromis_polyacanthus
ENSXMAG00000013169	-	96	40.854	ENSACIG00000013317	zgc:153215	99	40.854	Amphilophus_citrinellus
ENSXMAG00000013169	-	95	47.619	ENSAOCG00000010819	zgc:153215	84	47.619	Amphiprion_ocellaris
ENSXMAG00000013169	-	74	30.556	ENSAPEG00000022079	rbm12b	99	30.556	Amphiprion_percula
ENSXMAG00000013169	-	86	67.213	ENSATEG00000001886	zgc:153215	59	67.213	Anabas_testudineus
ENSXMAG00000013169	-	91	55.738	ENSAPLG00000002020	RBM12B	60	55.738	Anas_platyrhynchos
ENSXMAG00000013169	-	96	38.636	ENSACLG00000005575	rbm12b	60	38.636	Astatotilapia_calliptera
ENSXMAG00000013169	-	98	39.448	ENSACLG00000007675	zgc:153215	100	39.448	Astatotilapia_calliptera
ENSXMAG00000013169	-	68	43.038	ENSAMXG00000041973	rbm12b	74	30.638	Astyanax_mexicanus
ENSXMAG00000013169	-	82	55.738	ENSAMXG00000020853	zgc:153215	56	55.738	Astyanax_mexicanus
ENSXMAG00000013169	-	93	48.101	ENSCHIG00000006790	RBM12B	55	48.101	Capra_hircus
ENSXMAG00000013169	-	85	55.738	ENSCPBG00000003061	RBM12B	59	55.738	Chrysemys_picta_bellii
ENSXMAG00000013169	-	75	46.154	ENSCSEG00000001575	-	87	46.154	Cynoglossus_semilaevis
ENSXMAG00000013169	-	93	39.506	ENSCSEG00000004610	rbm12b	56	39.506	Cynoglossus_semilaevis
ENSXMAG00000013169	-	97	46.867	ENSCVAG00000009259	-	99	46.867	Cyprinodon_variegatus
ENSXMAG00000013169	-	97	42.308	ENSDARG00000055889	zgc:153215	76	42.718	Danio_rerio
ENSXMAG00000013169	-	95	41.379	ENSETEG00000013005	-	54	41.379	Echinops_telfairi
ENSXMAG00000013169	-	86	62.319	ENSELUG00000009039	zgc:153215	69	54.651	Esox_lucius
ENSXMAG00000013169	-	95	50.750	ENSFHEG00000014539	zgc:153215	96	50.750	Fundulus_heteroclitus
ENSXMAG00000013169	-	97	39.241	ENSGMOG00000013467	rbm12b	68	39.241	Gadus_morhua
ENSXMAG00000013169	-	96	66.458	ENSGAFG00000007845	zgc:153215	98	66.458	Gambusia_affinis
ENSXMAG00000013169	-	85	55.738	ENSGAGG00000009774	RBM12B	58	55.738	Gopherus_agassizii
ENSXMAG00000013169	-	90	53.030	ENSHBUG00000016150	zgc:153215	63	53.030	Haplochromis_burtoni
ENSXMAG00000013169	-	96	38.636	ENSHBUG00000016227	rbm12b	60	38.636	Haplochromis_burtoni
ENSXMAG00000013169	-	93	37.500	ENSHCOG00000014952	rbm12b	63	37.500	Hippocampus_comes
ENSXMAG00000013169	-	89	46.988	ENSIPUG00000019731	zgc:153215	65	46.988	Ictalurus_punctatus
ENSXMAG00000013169	-	97	30.185	ENSSTOG00000027445	RBM12B	58	30.185	Ictidomys_tridecemlineatus
ENSXMAG00000013169	-	97	41.333	ENSKMAG00000004958	zgc:153215	99	41.333	Kryptolebias_marmoratus
ENSXMAG00000013169	-	98	44.764	ENSLBEG00000002597	zgc:153215	99	44.764	Labrus_bergylta
ENSXMAG00000013169	-	85	55.000	ENSLACG00000007177	RBM12B	58	55.000	Latimeria_chalumnae
ENSXMAG00000013169	-	88	68.852	ENSMAMG00000012038	zgc:153215	63	68.852	Mastacembelus_armatus
ENSXMAG00000013169	-	93	39.506	ENSMAMG00000011998	rbm12b	60	39.506	Mastacembelus_armatus
ENSXMAG00000013169	-	96	38.636	ENSMZEG00005015005	rbm12b	62	38.636	Maylandia_zebra
ENSXMAG00000013169	-	90	53.030	ENSMZEG00005005435	zgc:153215	63	53.030	Maylandia_zebra
ENSXMAG00000013169	-	98	35.731	ENSMMOG00000003372	zgc:153215	99	40.447	Mola_mola
ENSXMAG00000013169	-	97	42.827	ENSMALG00000001222	zgc:153215	99	42.827	Monopterus_albus
ENSXMAG00000013169	-	94	40.000	ENSMALG00000012059	rbm12b	60	40.000	Monopterus_albus
ENSXMAG00000013169	-	90	52.381	ENSNBRG00000013644	zgc:153215	63	52.381	Neolamprologus_brichardi
ENSXMAG00000013169	-	96	38.636	ENSNBRG00000015057	rbm12b	62	38.636	Neolamprologus_brichardi
ENSXMAG00000013169	-	94	53.165	ENSONIG00000006054	zgc:153215	94	41.322	Oreochromis_niloticus
ENSXMAG00000013169	-	97	30.266	ENSOCUG00000010353	RBM12B	56	30.266	Oryctolagus_cuniculus
ENSXMAG00000013169	-	99	37.716	ENSOMEG00000004220	zgc:153215	83	48.913	Oryzias_melastigma
ENSXMAG00000013169	-	97	72.727	ENSPFOG00000017451	zgc:153215	84	72.727	Poecilia_formosa
ENSXMAG00000013169	-	97	74.286	ENSPLAG00000000232	zgc:153215	99	74.286	Poecilia_latipinna
ENSXMAG00000013169	-	97	73.364	ENSPMEG00000016662	zgc:153215	99	73.364	Poecilia_mexicana
ENSXMAG00000013169	-	97	66.042	ENSPREG00000018608	zgc:153215	99	66.042	Poecilia_reticulata
ENSXMAG00000013169	-	95	39.506	ENSPNYG00000016696	rbm12b	61	39.506	Pundamilia_nyererei
ENSXMAG00000013169	-	97	39.732	ENSPNYG00000018125	zgc:153215	97	39.732	Pundamilia_nyererei
ENSXMAG00000013169	-	95	57.377	ENSPNAG00000025628	zgc:153215	78	57.377	Pygocentrus_nattereri
ENSXMAG00000013169	-	93	46.835	ENSRNOG00000055292	LOC679087	53	46.835	Rattus_norvegicus
ENSXMAG00000013169	-	98	46.835	ENSSBOG00000027592	RBM12B	51	46.835	Saimiri_boliviensis_boliviensis
ENSXMAG00000013169	-	98	31.089	ENSSFOG00015009427	zgc:153215	99	31.089	Scleropages_formosus
ENSXMAG00000013169	-	95	40.741	ENSSFOG00015001584	rbm12b	62	40.741	Scleropages_formosus
ENSXMAG00000013169	-	93	41.975	ENSSMAG00000019708	rbm12b	60	41.975	Scophthalmus_maximus
ENSXMAG00000013169	-	95	53.659	ENSSMAG00000019013	zgc:153215	82	53.659	Scophthalmus_maximus
ENSXMAG00000013169	-	97	36.559	ENSSDUG00000006856	rbm12b	61	36.559	Seriola_dumerili
ENSXMAG00000013169	-	95	53.571	ENSSDUG00000012545	zgc:153215	84	53.571	Seriola_dumerili
ENSXMAG00000013169	-	84	74.074	ENSSLDG00000013581	zgc:153215	58	74.074	Seriola_lalandi_dorsalis
ENSXMAG00000013169	-	97	36.559	ENSSLDG00000016156	rbm12b	61	36.559	Seriola_lalandi_dorsalis
ENSXMAG00000013169	-	95	44.828	ENSSARG00000011845	-	55	44.828	Sorex_araneus
ENSXMAG00000013169	-	85	52.459	ENSSPUG00000016954	RBM12B	66	52.459	Sphenodon_punctatus
ENSXMAG00000013169	-	99	33.333	ENSSPAG00000006774	rbm12b	64	33.333	Stegastes_partitus
ENSXMAG00000013169	-	98	40.559	ENSSPAG00000023584	zgc:153215	99	38.053	Stegastes_partitus
ENSXMAG00000013169	-	74	39.607	ENSTNIG00000018374	-	88	40.169	Tetraodon_nigroviridis
ENSXMAG00000013169	-	97	30.088	ENSXETG00000014694	rbm12b	99	30.088	Xenopus_tropicalis
ENSXMAG00000013169	-	96	30.201	ENSXETG00000014696	rbm12b	67	30.201	Xenopus_tropicalis
ENSXMAG00000013169	-	73	30.189	ENSXCOG00000019735	-	98	30.189	Xiphophorus_couchianus
ENSXMAG00000013169	-	98	69.753	ENSXCOG00000019654	zgc:153215	99	69.753	Xiphophorus_couchianus