EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013353 (Gene tree)
Gene ID: 102221953
Gene Symbol: -
Alias: -
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 2454 bases
Position: chr12:893887-896340
Accession: 102221953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013373	PC4	PF02229.16	3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013389	-	379	XM_005813469	ENSXMAP00000013373	124 (aa)	XP_005813526	M4AFX9

Gene Model

Click here to download ENSXMAG00000013353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013353	-	99	79.200	ENSAMXG00000038560	-	100	77.778	Astyanax_mexicanus
ENSXMAG00000013353	-	100	52.381	ENSCPBG00000010898	-	100	52.381	Chrysemys_picta_bellii
ENSXMAG00000013353	-	100	46.212	ENSCING00000017560	-	52	53.125	Ciona_intestinalis
ENSXMAG00000013353	-	100	84.800	ENSCSEG00000011154	-	100	80.800	Cynoglossus_semilaevis
ENSXMAG00000013353	-	100	87.200	ENSCSEG00000009205	-	100	83.200	Cynoglossus_semilaevis
ENSXMAG00000013353	-	100	94.400	ENSCVAG00000021573	-	73	89.600	Cyprinodon_variegatus
ENSXMAG00000013353	-	54	80.597	ENSDORG00000026076	-	100	63.200	Dipodomys_ordii
ENSXMAG00000013353	-	71	40.449	FBgn0015299	Ssb-c31a	50	41.071	Drosophila_melanogaster
ENSXMAG00000013353	-	100	77.519	ENSELUG00000022688	sub1	100	74.419	Esox_lucius
ENSXMAG00000013353	-	100	74.615	ENSELUG00000005136	TCP4	100	68.462	Esox_lucius
ENSXMAG00000013353	-	100	80.800	ENSGMOG00000011659	-	100	80.000	Gadus_morhua
ENSXMAG00000013353	-	100	99.194	ENSGAFG00000016251	-	100	99.194	Gambusia_affinis
ENSXMAG00000013353	-	100	90.400	ENSKMAG00000013670	-	100	88.800	Kryptolebias_marmoratus
ENSXMAG00000013353	-	99	86.992	ENSMMOG00000008698	-	100	86.290	Mola_mola
ENSXMAG00000013353	-	76	73.684	ENSNGAG00000001935	-	69	70.526	Nannospalax_galili
ENSXMAG00000013353	-	100	62.992	ENSODEG00000004776	-	100	61.905	Octodon_degus
ENSXMAG00000013353	-	100	91.200	ENSONIG00000013958	-	100	90.400	Oreochromis_niloticus
ENSXMAG00000013353	-	99	88.710	ENSORLG00000017237	sub1	100	88.000	Oryzias_latipes
ENSXMAG00000013353	-	99	88.710	ENSORLG00020014865	sub1	100	88.000	Oryzias_latipes_hni
ENSXMAG00000013353	-	99	88.710	ENSORLG00015005820	sub1	100	88.000	Oryzias_latipes_hsok
ENSXMAG00000013353	-	99	87.097	ENSOMEG00000003351	-	100	86.400	Oryzias_melastigma
ENSXMAG00000013353	-	99	84.921	ENSPMGG00000017654	-	100	77.953	Periophthalmus_magnuspinnatus
ENSXMAG00000013353	-	100	99.194	ENSPFOG00000017101	-	100	99.194	Poecilia_formosa
ENSXMAG00000013353	-	100	99.194	ENSPLAG00000015088	-	100	99.194	Poecilia_latipinna
ENSXMAG00000013353	-	100	99.194	ENSPMEG00000023692	-	100	99.194	Poecilia_mexicana
ENSXMAG00000013353	-	100	99.194	ENSPREG00000011918	-	100	99.194	Poecilia_reticulata
ENSXMAG00000013353	-	100	100.000	ENSXCOG00000009356	-	100	100.000	Xiphophorus_couchianus