EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013356 (Gene tree)
Gene ID: 102222409
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 47176 bases
Position: chr12:821984-869159
Accession: 102222409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013416	DZF	PF07528.14	2e-71	1	1
ENSXMAP00000013416	zf-met	PF12874.7	2.8e-21	1	3
ENSXMAP00000013416	zf-met	PF12874.7	2.8e-21	2	3
ENSXMAP00000013416	zf-met	PF12874.7	2.8e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013432	-	7246	XM_005813470	ENSXMAP00000013416	1067 (aa)	XP_005813527	M4AG22

Gene Model

Click here to download ENSXMAG00000013356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013356	zfr	100	74.291	ENSG00000056097	ZFR	99	75.252	Homo_sapiens
ENSXMAG00000013356	zfr	100	79.796	ENSAPOG00000009740	zfr	99	79.631	Acanthochromis_polyacanthus
ENSXMAG00000013356	zfr	100	74.267	ENSAMEG00000006184	ZFR	99	75.138	Ailuropoda_melanoleuca
ENSXMAG00000013356	zfr	76	86.707	ENSACIG00000015926	zfr	82	86.707	Amphilophus_citrinellus
ENSXMAG00000013356	zfr	100	83.040	ENSAOCG00000013876	zfr	99	83.689	Amphiprion_ocellaris
ENSXMAG00000013356	zfr	100	86.284	ENSAPEG00000024383	zfr	99	86.932	Amphiprion_percula
ENSXMAG00000013356	zfr	100	87.721	ENSATEG00000010271	zfr	99	88.093	Anabas_testudineus
ENSXMAG00000013356	zfr	78	68.720	ENSAPLG00000015627	-	100	68.921	Anas_platyrhynchos
ENSXMAG00000013356	zfr	100	72.518	ENSACAG00000007880	ZFR	99	73.945	Anolis_carolinensis
ENSXMAG00000013356	zfr	100	74.199	ENSANAG00000023333	ZFR	99	75.160	Aotus_nancymaae
ENSXMAG00000013356	zfr	76	86.341	ENSACLG00000016832	zfr	82	86.220	Astatotilapia_calliptera
ENSXMAG00000013356	zfr	98	81.569	ENSAMXG00000019511	zfr	99	82.420	Astyanax_mexicanus
ENSXMAG00000013356	zfr	100	74.359	ENSBTAG00000008414	ZFR	99	75.138	Bos_taurus
ENSXMAG00000013356	zfr	100	74.199	ENSCJAG00000018740	ZFR	99	75.160	Callithrix_jacchus
ENSXMAG00000013356	zfr	100	72.329	ENSCAFG00000018886	ZFR	99	74.824	Canis_familiaris
ENSXMAG00000013356	zfr	100	74.359	ENSCAFG00020016859	-	99	75.229	Canis_lupus_dingo
ENSXMAG00000013356	zfr	100	74.359	ENSCHIG00000007710	ZFR	99	75.069	Capra_hircus
ENSXMAG00000013356	zfr	97	73.365	ENSTSYG00000010670	ZFR	98	74.833	Carlito_syrichta
ENSXMAG00000013356	zfr	96	60.000	ENSCAPG00000015655	ZFR	99	58.374	Cavia_aperea
ENSXMAG00000013356	zfr	89	79.282	ENSCPOG00000000862	ZFR	99	69.091	Cavia_porcellus
ENSXMAG00000013356	zfr	100	74.199	ENSCCAG00000024473	ZFR	99	75.160	Cebus_capucinus
ENSXMAG00000013356	zfr	100	74.291	ENSCATG00000038311	ZFR	99	75.252	Cercocebus_atys
ENSXMAG00000013356	zfr	97	73.314	ENSCLAG00000007408	ZFR	99	74.448	Chinchilla_lanigera
ENSXMAG00000013356	zfr	100	74.197	ENSCSAG00000017180	ZFR	99	75.253	Chlorocebus_sabaeus
ENSXMAG00000013356	zfr	89	65.470	ENSCHOG00000003848	ZFR	94	64.444	Choloepus_hoffmanni
ENSXMAG00000013356	zfr	100	74.931	ENSCPBG00000024211	ZFR	99	75.875	Chrysemys_picta_bellii
ENSXMAG00000013356	zfr	100	74.382	ENSCANG00000017807	ZFR	99	75.344	Colobus_angolensis_palliatus
ENSXMAG00000013356	zfr	100	74.064	ENSCGRG00001016009	Zfr	99	74.657	Cricetulus_griseus_chok1gshd
ENSXMAG00000013356	zfr	98	73.095	ENSCGRG00000001228	Zfr	98	73.327	Cricetulus_griseus_crigri
ENSXMAG00000013356	zfr	76	83.131	ENSCSEG00000009224	zfr	100	77.737	Cynoglossus_semilaevis
ENSXMAG00000013356	zfr	100	82.775	ENSCSEG00000011169	ZFR	99	83.892	Cynoglossus_semilaevis
ENSXMAG00000013356	zfr	98	89.810	ENSCVAG00000016494	zfr	100	90.476	Cyprinodon_variegatus
ENSXMAG00000013356	zfr	99	80.556	ENSDARG00000027109	zfr	99	81.019	Danio_rerio
ENSXMAG00000013356	zfr	100	74.335	ENSDNOG00000008852	ZFR	99	75.115	Dasypus_novemcinctus
ENSXMAG00000013356	zfr	100	74.016	ENSDORG00000016643	Zfr	99	74.610	Dipodomys_ordii
ENSXMAG00000013356	zfr	100	70.810	ENSETEG00000008937	ZFR	99	71.218	Echinops_telfairi
ENSXMAG00000013356	zfr	51	59.353	ENSEBUG00000012503	-	97	58.929	Eptatretus_burgeri
ENSXMAG00000013356	zfr	100	74.267	ENSEASG00005007104	ZFR	99	75.138	Equus_asinus_asinus
ENSXMAG00000013356	zfr	82	72.049	ENSECAG00000012851	ZFR	99	72.879	Equus_caballus
ENSXMAG00000013356	zfr	94	65.922	ENSEEUG00000014206	ZFR	82	75.506	Erinaceus_europaeus
ENSXMAG00000013356	zfr	100	70.265	ENSELUG00000022743	zfr	99	71.546	Esox_lucius
ENSXMAG00000013356	zfr	100	74.359	ENSFCAG00000000354	ZFR	99	75.229	Felis_catus
ENSXMAG00000013356	zfr	100	74.537	ENSFALG00000002149	ZFR	99	75.370	Ficedula_albicollis
ENSXMAG00000013356	zfr	99	73.933	ENSFDAG00000012993	ZFR	99	74.513	Fukomys_damarensis
ENSXMAG00000013356	zfr	58	85.299	ENSFHEG00000012064	zfr	100	84.485	Fundulus_heteroclitus
ENSXMAG00000013356	zfr	95	93.243	ENSGMOG00000003967	zfr	93	91.935	Gadus_morhua
ENSXMAG00000013356	zfr	100	75.808	ENSGALG00000003235	-	99	76.362	Gallus_gallus
ENSXMAG00000013356	zfr	100	75.254	ENSGALG00000034488	-	99	75.046	Gallus_gallus
ENSXMAG00000013356	zfr	83	100.000	ENSGAFG00000016229	zfr	96	100.000	Gambusia_affinis
ENSXMAG00000013356	zfr	99	81.044	ENSGACG00000005045	zfr	99	81.749	Gasterosteus_aculeatus
ENSXMAG00000013356	zfr	95	74.369	ENSGAGG00000013544	ZFR	99	75.364	Gopherus_agassizii
ENSXMAG00000013356	zfr	100	74.382	ENSGGOG00000016302	ZFR	99	75.160	Gorilla_gorilla
ENSXMAG00000013356	zfr	100	74.197	ENSHGLG00000008088	ZFR	99	74.977	Heterocephalus_glaber_female
ENSXMAG00000013356	zfr	96	73.755	ENSHGLG00100016776	ZFR	98	74.544	Heterocephalus_glaber_male
ENSXMAG00000013356	zfr	100	82.163	ENSHCOG00000001548	zfr	99	83.272	Hippocampus_comes
ENSXMAG00000013356	zfr	100	80.702	ENSIPUG00000008192	zfr	99	82.087	Ictalurus_punctatus
ENSXMAG00000013356	zfr	100	74.241	ENSSTOG00000008742	ZFR	99	74.701	Ictidomys_tridecemlineatus
ENSXMAG00000013356	zfr	99	69.671	ENSJJAG00000023064	Zfr	98	70.235	Jaculus_jaculus
ENSXMAG00000013356	zfr	91	86.077	ENSKMAG00000009468	zfr	99	87.805	Kryptolebias_marmoratus
ENSXMAG00000013356	zfr	99	83.488	ENSLBEG00000010783	zfr	99	83.426	Labrus_bergylta
ENSXMAG00000013356	zfr	100	73.229	ENSLACG00000000831	ZFR	99	73.597	Latimeria_chalumnae
ENSXMAG00000013356	zfr	100	78.810	ENSLOCG00000006727	zfr	99	79.711	Lepisosteus_oculatus
ENSXMAG00000013356	zfr	98	73.970	ENSLAFG00000002308	ZFR	99	74.578	Loxodonta_africana
ENSXMAG00000013356	zfr	100	73.376	ENSMFAG00000042691	ZFR	99	74.335	Macaca_fascicularis
ENSXMAG00000013356	zfr	100	74.291	ENSMMUG00000001317	ZFR	99	75.252	Macaca_mulatta
ENSXMAG00000013356	zfr	100	74.291	ENSMNEG00000029441	ZFR	99	75.252	Macaca_nemestrina
ENSXMAG00000013356	zfr	100	71.915	ENSMLEG00000028503	ZFR	99	74.809	Mandrillus_leucophaeus
ENSXMAG00000013356	zfr	100	86.140	ENSMAMG00000017351	zfr	99	85.767	Mastacembelus_armatus
ENSXMAG00000013356	zfr	76	86.341	ENSMZEG00005021243	zfr	82	86.220	Maylandia_zebra
ENSXMAG00000013356	zfr	96	63.785	ENSMGAG00000002841	ZFR	99	63.663	Meleagris_gallopavo
ENSXMAG00000013356	zfr	100	74.612	ENSMAUG00000000976	Zfr	99	74.382	Mesocricetus_auratus
ENSXMAG00000013356	zfr	100	74.149	ENSMICG00000001244	ZFR	99	75.069	Microcebus_murinus
ENSXMAG00000013356	zfr	100	74.542	ENSMOCG00000018630	Zfr	99	74.771	Microtus_ochrogaster
ENSXMAG00000013356	zfr	100	80.130	ENSMMOG00000012585	zfr	90	82.751	Mola_mola
ENSXMAG00000013356	zfr	100	74.793	ENSMODG00000020412	ZFR	99	75.161	Monodelphis_domestica
ENSXMAG00000013356	zfr	100	81.860	ENSMALG00000007123	zfr	99	81.674	Monopterus_albus
ENSXMAG00000013356	zfr	100	74.197	MGP_CAROLIEiJ_G0019681	Zfr	100	77.517	Mus_caroli
ENSXMAG00000013356	zfr	100	74.610	ENSMUSG00000022201	Zfr	99	77.517	Mus_musculus
ENSXMAG00000013356	zfr	100	74.197	MGP_PahariEiJ_G0016057	Zfr	100	77.517	Mus_pahari
ENSXMAG00000013356	zfr	100	74.197	MGP_SPRETEiJ_G0020574	Zfr	100	77.517	Mus_spretus
ENSXMAG00000013356	zfr	73	72.050	ENSMPUG00000015193	-	99	72.603	Mustela_putorius_furo
ENSXMAG00000013356	zfr	97	73.880	ENSMLUG00000011797	ZFR	99	75.024	Myotis_lucifugus
ENSXMAG00000013356	zfr	100	74.474	ENSNGAG00000018328	Zfr	99	75.252	Nannospalax_galili
ENSXMAG00000013356	zfr	76	82.482	ENSNBRG00000008378	zfr	82	82.482	Neolamprologus_brichardi
ENSXMAG00000013356	zfr	100	71.717	ENSNLEG00000014098	ZFR	99	74.618	Nomascus_leucogenys
ENSXMAG00000013356	zfr	96	69.319	ENSMEUG00000010225	ZFR	99	69.607	Notamacropus_eugenii
ENSXMAG00000013356	zfr	83	83.534	ENSOPRG00000016756	ZFR	84	83.534	Ochotona_princeps
ENSXMAG00000013356	zfr	96	73.664	ENSODEG00000001990	ZFR	99	74.497	Octodon_degus
ENSXMAG00000013356	zfr	100	64.142	ENSONIG00000013960	zfr	78	84.173	Oreochromis_niloticus
ENSXMAG00000013356	zfr	96	74.687	ENSOANG00000014434	ZFR	99	75.168	Ornithorhynchus_anatinus
ENSXMAG00000013356	zfr	100	74.197	ENSOCUG00000016737	ZFR	99	74.977	Oryctolagus_cuniculus
ENSXMAG00000013356	zfr	100	84.372	ENSORLG00000017243	zfr	99	84.465	Oryzias_latipes
ENSXMAG00000013356	zfr	100	84.372	ENSORLG00020014823	zfr	99	84.465	Oryzias_latipes_hni
ENSXMAG00000013356	zfr	100	84.093	ENSORLG00015005801	zfr	99	84.186	Oryzias_latipes_hsok
ENSXMAG00000013356	zfr	100	84.480	ENSOMEG00000003336	zfr	99	84.572	Oryzias_melastigma
ENSXMAG00000013356	zfr	100	72.344	ENSOGAG00000015117	ZFR	99	73.168	Otolemur_garnettii
ENSXMAG00000013356	zfr	97	74.113	ENSOARG00000012233	ZFR	99	74.544	Ovis_aries
ENSXMAG00000013356	zfr	97	73.415	ENSPPAG00000027447	ZFR	99	74.690	Pan_paniscus
ENSXMAG00000013356	zfr	100	74.359	ENSPPRG00000008253	ZFR	99	75.229	Panthera_pardus
ENSXMAG00000013356	zfr	100	71.978	ENSPTIG00000010038	ZFR	99	73.063	Panthera_tigris_altaica
ENSXMAG00000013356	zfr	100	74.291	ENSPTRG00000016771	ZFR	99	75.252	Pan_troglodytes
ENSXMAG00000013356	zfr	100	73.137	ENSPANG00000003729	ZFR	99	74.009	Papio_anubis
ENSXMAG00000013356	zfr	100	80.314	ENSPKIG00000016781	ZFR	99	79.667	Paramormyrops_kingsleyae
ENSXMAG00000013356	zfr	99	72.869	ENSPKIG00000007596	ZFR	99	73.327	Paramormyrops_kingsleyae
ENSXMAG00000013356	zfr	51	80.586	ENSPSIG00000005779	ZFR	98	81.319	Pelodiscus_sinensis
ENSXMAG00000013356	zfr	100	69.561	ENSPMGG00000015984	zfr	99	70.308	Periophthalmus_magnuspinnatus
ENSXMAG00000013356	zfr	96	72.633	ENSPEMG00000014573	Zfr	98	73.245	Peromyscus_maniculatus_bairdii
ENSXMAG00000013356	zfr	100	74.816	ENSPCIG00000020906	ZFR	99	75.184	Phascolarctos_cinereus
ENSXMAG00000013356	zfr	100	97.942	ENSPFOG00000005931	zfr	100	97.942	Poecilia_formosa
ENSXMAG00000013356	zfr	100	97.383	ENSPREG00000011947	zfr	100	97.383	Poecilia_reticulata
ENSXMAG00000013356	zfr	97	73.524	ENSPPYG00000015378	ZFR	99	74.427	Pongo_abelii
ENSXMAG00000013356	zfr	100	67.828	ENSPCAG00000007277	ZFR	99	68.411	Procavia_capensis
ENSXMAG00000013356	zfr	95	73.481	ENSPCOG00000000045	ZFR	99	74.542	Propithecus_coquereli
ENSXMAG00000013356	zfr	94	83.030	ENSPVAG00000004780	ZFR	94	83.030	Pteropus_vampyrus
ENSXMAG00000013356	zfr	76	86.341	ENSPNYG00000006239	zfr	82	86.220	Pundamilia_nyererei
ENSXMAG00000013356	zfr	100	81.348	ENSPNAG00000025151	zfr	99	82.456	Pygocentrus_nattereri
ENSXMAG00000013356	zfr	100	74.197	ENSRNOG00000011627	Zfr	99	82.812	Rattus_norvegicus
ENSXMAG00000013356	zfr	100	74.382	ENSRBIG00000041561	ZFR	99	75.344	Rhinopithecus_bieti
ENSXMAG00000013356	zfr	100	74.382	ENSRROG00000044008	ZFR	99	75.344	Rhinopithecus_roxellana
ENSXMAG00000013356	zfr	96	73.826	ENSSBOG00000024150	ZFR	99	74.736	Saimiri_boliviensis_boliviensis
ENSXMAG00000013356	zfr	96	74.521	ENSSHAG00000015478	ZFR	99	74.808	Sarcophilus_harrisii
ENSXMAG00000013356	zfr	100	74.146	ENSSFOG00015017300	ZFR	99	74.515	Scleropages_formosus
ENSXMAG00000013356	zfr	100	84.481	ENSSMAG00000000320	zfr	99	85.491	Scophthalmus_maximus
ENSXMAG00000013356	zfr	100	87.546	ENSSDUG00000013882	zfr	99	88.011	Seriola_dumerili
ENSXMAG00000013356	zfr	76	87.348	ENSSLDG00000000762	zfr	82	87.348	Seriola_lalandi_dorsalis
ENSXMAG00000013356	zfr	90	85.586	ENSSARG00000006571	ZFR	92	85.586	Sorex_araneus
ENSXMAG00000013356	zfr	96	75.000	ENSSPUG00000016786	ZFR	99	74.952	Sphenodon_punctatus
ENSXMAG00000013356	zfr	100	86.735	ENSSPAG00000019293	zfr	99	87.662	Stegastes_partitus
ENSXMAG00000013356	zfr	100	74.173	ENSSSCG00000027681	ZFR	99	74.747	Sus_scrofa
ENSXMAG00000013356	zfr	99	74.376	ENSTGUG00000001909	ZFR	99	74.653	Taeniopygia_guttata
ENSXMAG00000013356	zfr	100	84.215	ENSTRUG00000016620	zfr	99	84.494	Takifugu_rubripes
ENSXMAG00000013356	zfr	56	80.201	ENSTNIG00000018856	zfr	99	78.571	Tetraodon_nigroviridis
ENSXMAG00000013356	zfr	95	71.724	ENSTBEG00000017687	ZFR	95	71.809	Tupaia_belangeri
ENSXMAG00000013356	zfr	100	70.312	ENSTTRG00000017321	ZFR	99	70.994	Tursiops_truncatus
ENSXMAG00000013356	zfr	78	71.462	ENSUAMG00000000172	-	99	72.216	Ursus_americanus
ENSXMAG00000013356	zfr	78	71.462	ENSUMAG00000013805	-	99	72.216	Ursus_maritimus
ENSXMAG00000013356	zfr	100	72.161	ENSVPAG00000011011	ZFR	99	72.844	Vicugna_pacos
ENSXMAG00000013356	zfr	100	74.359	ENSVVUG00000022171	-	99	75.229	Vulpes_vulpes
ENSXMAG00000013356	zfr	100	69.452	ENSXETG00000015598	zfr	99	70.381	Xenopus_tropicalis
ENSXMAG00000013356	zfr	100	99.719	ENSXCOG00000009361	zfr	100	99.719	Xiphophorus_couchianus