EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013407 (Gene tree)
Gene ID: 102224056
Gene Symbol: rbmx
Alias: fc66e11|wu:fb37c07|wu:fc66e11
Full Name: RNA binding motif protein X-linked
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 76864 bases
Position: chr23:7859696-7936559
Accession: 102224056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013431	RBM1CTR	PF08081.11	2.7e-18	1	1
ENSXMAP00000023978	RBM1CTR	PF08081.11	2.7e-18	1	1
ENSXMAP00000030035	RBM1CTR	PF08081.11	2.7e-18	1	1
ENSXMAP00000037569	RBM1CTR	PF08081.11	2.7e-18	1	1
ENSXMAP00000039263	RBM1CTR	PF08081.11	2.7e-18	1	1
ENSXMAP00000013431	RRM_1	PF00076.22	2.3e-24	1	1
ENSXMAP00000023978	RRM_1	PF00076.22	2.3e-24	1	1
ENSXMAP00000030035	RRM_1	PF00076.22	2.3e-24	1	1
ENSXMAP00000037569	RRM_1	PF00076.22	2.3e-24	1	1
ENSXMAP00000039263	RRM_1	PF00076.22	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000038163	-	1814	-	ENSXMAP00000037569	383 (aa)	-	UPI000C6D2992
ENSXMAT00000040694	-	1710	XM_023328892	ENSXMAP00000039263	383 (aa)	XP_023184660	UPI000C6D2992
ENSXMAT00000013447	-	1153	-	ENSXMAP00000013431	383 (aa)	-	M4AG37
ENSXMAT00000028425	-	2895	-	ENSXMAP00000023978	383 (aa)	-	UPI000C6D2992
ENSXMAT00000037892	-	1153	-	ENSXMAP00000030035	383 (aa)	-	UPI000C6D2992

Gene Model

Click here to download ENSXMAG00000013407's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013407	rbmx	94	91.008	ENSAPOG00000006496	rbmx	93	91.484	Acanthochromis_polyacanthus
ENSXMAG00000013407	rbmx	92	81.894	ENSACIG00000011598	rbmx	91	83.287	Amphilophus_citrinellus
ENSXMAG00000013407	rbmx	93	88.398	ENSACIG00000011576	rbmx	93	89.315	Amphilophus_citrinellus
ENSXMAG00000013407	rbmx	93	90.191	ENSAOCG00000020930	rbmx	93	91.553	Amphiprion_ocellaris
ENSXMAG00000013407	rbmx	100	89.313	ENSAPEG00000007316	rbmx	94	91.553	Amphiprion_percula
ENSXMAG00000013407	rbmx	93	89.101	ENSATEG00000017363	rbmx	93	90.463	Anabas_testudineus
ENSXMAG00000013407	rbmx	100	87.212	ENSACLG00000000098	rbmx	93	90.411	Astatotilapia_calliptera
ENSXMAG00000013407	rbmx	93	83.836	ENSAMXG00000019990	rbmx	93	83.836	Astyanax_mexicanus
ENSXMAG00000013407	rbmx	93	89.071	ENSCSEG00000005240	rbmx	93	90.437	Cynoglossus_semilaevis
ENSXMAG00000013407	rbmx	100	96.883	ENSCVAG00000008876	rbmx	100	96.883	Cyprinodon_variegatus
ENSXMAG00000013407	rbmx	92	80.000	ENSDARG00000014244	rbmx	100	80.208	Danio_rerio
ENSXMAG00000013407	rbmx	96	56.053	ENSEBUG00000006778	rbmx	99	56.140	Eptatretus_burgeri
ENSXMAG00000013407	rbmx	100	81.934	ENSELUG00000003600	rbmx	100	78.125	Esox_lucius
ENSXMAG00000013407	rbmx	100	96.364	ENSFHEG00000016764	rbmx	100	96.364	Fundulus_heteroclitus
ENSXMAG00000013407	rbmx	100	82.750	ENSGMOG00000004496	rbmx	93	81.283	Gadus_morhua
ENSXMAG00000013407	rbmx	100	99.739	ENSGAFG00000019917	rbmx	100	99.739	Gambusia_affinis
ENSXMAG00000013407	rbmx	93	82.703	ENSGACG00000017237	rbmx	93	87.903	Gasterosteus_aculeatus
ENSXMAG00000013407	rbmx	100	89.258	ENSHBUG00000015283	rbmx	93	90.685	Haplochromis_burtoni
ENSXMAG00000013407	rbmx	93	83.379	ENSHCOG00000001111	rbmx	100	83.391	Hippocampus_comes
ENSXMAG00000013407	rbmx	100	78.571	ENSIPUG00000022212	rbmx	93	79.670	Ictalurus_punctatus
ENSXMAG00000013407	rbmx	100	91.214	ENSKMAG00000001754	rbmx	100	91.214	Kryptolebias_marmoratus
ENSXMAG00000013407	rbmx	93	87.397	ENSLBEG00000010000	rbmx	93	87.397	Labrus_bergylta
ENSXMAG00000013407	rbmx	93	64.175	ENSLACG00000015261	rbmx	93	71.467	Latimeria_chalumnae
ENSXMAG00000013407	rbmx	94	82.759	ENSLOCG00000015142	rbmx	93	82.888	Lepisosteus_oculatus
ENSXMAG00000013407	rbmx	93	89.101	ENSMAMG00000020591	rbmx	93	89.918	Mastacembelus_armatus
ENSXMAG00000013407	rbmx	90	89.235	ENSMZEG00005006432	rbmx	87	90.368	Maylandia_zebra
ENSXMAG00000013407	rbmx	93	90.685	ENSMMOG00000001043	rbmx	93	90.685	Mola_mola
ENSXMAG00000013407	rbmx	93	83.607	ENSMALG00000009777	rbmx	93	84.973	Monopterus_albus
ENSXMAG00000013407	rbmx	100	86.957	ENSNBRG00000022154	rbmx	93	90.137	Neolamprologus_brichardi
ENSXMAG00000013407	rbmx	100	86.735	ENSONIG00000002700	rbmx	93	90.164	Oreochromis_niloticus
ENSXMAG00000013407	rbmx	100	88.041	ENSORLG00000001692	rbmx	93	88.556	Oryzias_latipes
ENSXMAG00000013407	rbmx	100	86.294	ENSORLG00020021132	rbmx	93	88.315	Oryzias_latipes_hni
ENSXMAG00000013407	rbmx	100	86.041	ENSORLG00015000330	rbmx	93	88.315	Oryzias_latipes_hsok
ENSXMAG00000013407	rbmx	100	81.679	ENSOMEG00000016787	rbmx	100	86.207	Oryzias_melastigma
ENSXMAG00000013407	rbmx	100	69.487	ENSPKIG00000017611	rbmx	93	70.523	Paramormyrops_kingsleyae
ENSXMAG00000013407	rbmx	100	80.102	ENSPKIG00000024910	-	93	82.466	Paramormyrops_kingsleyae
ENSXMAG00000013407	rbmx	91	83.381	ENSPMGG00000017906	rbmx	95	86.111	Periophthalmus_magnuspinnatus
ENSXMAG00000013407	rbmx	100	99.217	ENSPFOG00000013193	rbmx	100	99.217	Poecilia_formosa
ENSXMAG00000013407	rbmx	100	99.217	ENSPLAG00000010472	rbmx	100	99.217	Poecilia_latipinna
ENSXMAG00000013407	rbmx	100	99.217	ENSPMEG00000007579	rbmx	100	99.217	Poecilia_mexicana
ENSXMAG00000013407	rbmx	100	99.217	ENSPREG00000010279	rbmx	100	99.217	Poecilia_reticulata
ENSXMAG00000013407	rbmx	100	89.258	ENSPNYG00000012536	rbmx	93	90.685	Pundamilia_nyererei
ENSXMAG00000013407	rbmx	93	85.519	ENSPNAG00000019648	rbmx	93	85.519	Pygocentrus_nattereri
ENSXMAG00000013407	rbmx	93	79.890	ENSSFOG00015011749	-	93	78.237	Scleropages_formosus
ENSXMAG00000013407	rbmx	94	78.747	ENSSFOG00015008229	rbmx	93	82.418	Scleropages_formosus
ENSXMAG00000013407	rbmx	93	87.671	ENSSMAG00000014636	rbmx	93	88.798	Scophthalmus_maximus
ENSXMAG00000013407	rbmx	93	90.736	ENSSDUG00000000242	rbmx	93	91.826	Seriola_dumerili
ENSXMAG00000013407	rbmx	93	90.736	ENSSLDG00000021381	rbmx	93	92.098	Seriola_lalandi_dorsalis
ENSXMAG00000013407	rbmx	94	89.459	ENSSPAG00000008582	rbmx	93	91.008	Stegastes_partitus
ENSXMAG00000013407	rbmx	94	87.534	ENSTRUG00000006031	rbmx	93	88.798	Takifugu_rubripes
ENSXMAG00000013407	rbmx	93	83.196	ENSTNIG00000016844	rbmx	93	86.649	Tetraodon_nigroviridis
ENSXMAG00000013407	rbmx	67	57.565	ENSUAMG00000011752	-	95	56.809	Ursus_americanus
ENSXMAG00000013407	rbmx	67	57.565	ENSUMAG00000019276	-	95	56.809	Ursus_maritimus
ENSXMAG00000013407	rbmx	93	54.545	ENSXETG00000003481	rbmx	93	53.476	Xenopus_tropicalis
ENSXMAG00000013407	rbmx	96	94.309	ENSXCOG00000016084	rbmx	99	94.309	Xiphophorus_couchianus