EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013463 (Gene tree)
Gene ID: 102229932
Gene Symbol: rbm8a
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3375 bases
Position: chr3:11697874-11701248
Accession: 102229932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000030233	RRM_1	PF00076.22	2.3e-19	1	1
ENSXMAP00000013494	RRM_1	PF00076.22	2.8e-19	1	1
ENSXMAP00000013494	RRM_3	PF08777.11	4.9e-06	1	1
ENSXMAP00000030233	RRM_3	PF08777.11	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000035671	-	1257	-	ENSXMAP00000030233	158 (aa)	-	-
ENSXMAT00000013510	-	1001	XM_005801817	ENSXMAP00000013494	175 (aa)	XP_005801874	M4AGA0

Gene Model

Click here to download ENSXMAG00000013463's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG
xma03015	mRNA surveillance pathway	KEGG
xma03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013463	rbm8a	94	90.066	ENSG00000265241	RBM8A	91	91.139	Homo_sapiens
ENSXMAG00000013463	rbm8a	100	95.000	ENSAPOG00000009727	rbm8a	90	96.203	Acanthochromis_polyacanthus
ENSXMAG00000013463	rbm8a	94	88.312	ENSAMEG00000017623	RBM8A	91	89.441	Ailuropoda_melanoleuca
ENSXMAG00000013463	rbm8a	100	95.625	ENSACIG00000017678	rbm8a	100	96.875	Amphilophus_citrinellus
ENSXMAG00000013463	rbm8a	100	95.000	ENSAOCG00000023887	rbm8a	76	96.203	Amphiprion_ocellaris
ENSXMAG00000013463	rbm8a	100	95.000	ENSAPEG00000022847	rbm8a	76	96.203	Amphiprion_percula
ENSXMAG00000013463	rbm8a	100	95.000	ENSATEG00000005630	rbm8a	90	96.203	Anabas_testudineus
ENSXMAG00000013463	rbm8a	94	90.066	ENSANAG00000004525	RBM8A	91	91.139	Aotus_nancymaae
ENSXMAG00000013463	rbm8a	100	96.571	ENSACLG00000009627	rbm8a	100	96.571	Astatotilapia_calliptera
ENSXMAG00000013463	rbm8a	94	92.715	ENSAMXG00000040754	rbm8a	91	93.671	Astyanax_mexicanus
ENSXMAG00000013463	rbm8a	82	57.252	WBGene00004387	rnp-4	88	58.730	Caenorhabditis_elegans
ENSXMAG00000013463	rbm8a	94	90.066	ENSCJAG00000046869	RBM8A	91	91.139	Callithrix_jacchus
ENSXMAG00000013463	rbm8a	94	90.066	ENSCAFG00000023172	RBM8A	91	91.139	Canis_familiaris
ENSXMAG00000013463	rbm8a	94	90.066	ENSCAFG00020019945	RBM8A	91	91.139	Canis_lupus_dingo
ENSXMAG00000013463	rbm8a	94	90.066	ENSCHIG00000012114	RBM8A	91	91.139	Capra_hircus
ENSXMAG00000013463	rbm8a	94	90.066	ENSTSYG00000028809	RBM8A	91	91.139	Carlito_syrichta
ENSXMAG00000013463	rbm8a	69	90.826	ENSCAPG00000014086	RBM8A	89	90.826	Cavia_aperea
ENSXMAG00000013463	rbm8a	99	89.873	ENSCPOG00000022453	RBM8A	94	91.139	Cavia_porcellus
ENSXMAG00000013463	rbm8a	94	89.404	ENSCCAG00000022460	-	91	90.506	Cebus_capucinus
ENSXMAG00000013463	rbm8a	94	90.066	ENSCCAG00000028589	-	91	91.139	Cebus_capucinus
ENSXMAG00000013463	rbm8a	94	90.066	ENSCATG00000021691	RBM8A	91	91.139	Cercocebus_atys
ENSXMAG00000013463	rbm8a	94	90.066	ENSCLAG00000000547	RBM8A	91	91.139	Chinchilla_lanigera
ENSXMAG00000013463	rbm8a	94	90.066	ENSCSAG00000001779	RBM8A	91	91.139	Chlorocebus_sabaeus
ENSXMAG00000013463	rbm8a	94	90.066	ENSCPBG00000007941	RBM8A	73	91.139	Chrysemys_picta_bellii
ENSXMAG00000013463	rbm8a	99	64.103	ENSCING00000004877	-	95	63.924	Ciona_intestinalis
ENSXMAG00000013463	rbm8a	97	65.359	ENSCSAVG00000005685	-	95	64.557	Ciona_savignyi
ENSXMAG00000013463	rbm8a	94	90.066	ENSCANG00000042182	RBM8A	91	91.139	Colobus_angolensis_palliatus
ENSXMAG00000013463	rbm8a	94	90.066	ENSCGRG00001002681	-	91	91.139	Cricetulus_griseus_chok1gshd
ENSXMAG00000013463	rbm8a	97	75.484	ENSCGRG00001003032	-	92	75.625	Cricetulus_griseus_chok1gshd
ENSXMAG00000013463	rbm8a	94	90.066	ENSCGRG00000006832	-	91	91.139	Cricetulus_griseus_crigri
ENSXMAG00000013463	rbm8a	100	97.143	ENSCSEG00000011865	rbm8a	100	97.143	Cynoglossus_semilaevis
ENSXMAG00000013463	rbm8a	100	98.734	ENSCVAG00000020734	rbm8a	100	97.714	Cyprinodon_variegatus
ENSXMAG00000013463	rbm8a	97	92.258	ENSDARG00000016516	rbm8a	91	93.038	Danio_rerio
ENSXMAG00000013463	rbm8a	58	85.714	ENSDNOG00000025265	-	100	85.714	Dasypus_novemcinctus
ENSXMAG00000013463	rbm8a	94	90.066	ENSDORG00000027340	-	100	83.626	Dipodomys_ordii
ENSXMAG00000013463	rbm8a	99	61.728	FBgn0033378	tsu	96	63.354	Drosophila_melanogaster
ENSXMAG00000013463	rbm8a	97	75.484	ENSETEG00000017932	-	92	75.625	Echinops_telfairi
ENSXMAG00000013463	rbm8a	89	84.722	ENSETEG00000008411	-	82	86.111	Echinops_telfairi
ENSXMAG00000013463	rbm8a	98	81.529	ENSEBUG00000010386	rbm8a	91	81.250	Eptatretus_burgeri
ENSXMAG00000013463	rbm8a	94	90.066	ENSEASG00005007455	RBM8A	91	91.139	Equus_asinus_asinus
ENSXMAG00000013463	rbm8a	94	90.066	ENSECAG00000022024	RBM8A	91	91.139	Equus_caballus
ENSXMAG00000013463	rbm8a	94	61.589	ENSEEUG00000008823	RBM8A	92	63.125	Erinaceus_europaeus
ENSXMAG00000013463	rbm8a	97	92.258	ENSELUG00000012464	rbm8a	90	93.038	Esox_lucius
ENSXMAG00000013463	rbm8a	94	89.404	ENSFCAG00000033936	RBM8A	91	90.506	Felis_catus
ENSXMAG00000013463	rbm8a	94	90.066	ENSFDAG00000020821	RBM8A	91	91.139	Fukomys_damarensis
ENSXMAG00000013463	rbm8a	100	99.367	ENSFHEG00000013538	rbm8a	100	98.286	Fundulus_heteroclitus
ENSXMAG00000013463	rbm8a	89	92.143	ENSGMOG00000007353	rbm8a	90	92.254	Gadus_morhua
ENSXMAG00000013463	rbm8a	94	77.181	ENSGALG00000036283	RBM8A	91	77.848	Gallus_gallus
ENSXMAG00000013463	rbm8a	100	100.000	ENSGAFG00000021698	rbm8a	100	100.000	Gambusia_affinis
ENSXMAG00000013463	rbm8a	89	95.714	ENSGACG00000013157	rbm8a	90	95.775	Gasterosteus_aculeatus
ENSXMAG00000013463	rbm8a	94	90.066	ENSGAGG00000023769	RBM8A	91	91.139	Gopherus_agassizii
ENSXMAG00000013463	rbm8a	94	90.066	ENSGGOG00000037248	RBM8A	91	91.139	Gorilla_gorilla
ENSXMAG00000013463	rbm8a	100	95.625	ENSHBUG00000008827	rbm8a	100	96.875	Haplochromis_burtoni
ENSXMAG00000013463	rbm8a	94	90.066	ENSHGLG00000007303	RBM8A	91	91.139	Heterocephalus_glaber_female
ENSXMAG00000013463	rbm8a	94	90.066	ENSHGLG00100012468	RBM8A	91	91.139	Heterocephalus_glaber_male
ENSXMAG00000013463	rbm8a	97	95.455	ENSHCOG00000010122	rbm8a	91	94.304	Hippocampus_comes
ENSXMAG00000013463	rbm8a	97	90.968	ENSIPUG00000006525	rbm8a	81	91.772	Ictalurus_punctatus
ENSXMAG00000013463	rbm8a	94	90.066	ENSSTOG00000013917	RBM8A	91	91.139	Ictidomys_tridecemlineatus
ENSXMAG00000013463	rbm8a	94	90.066	ENSJJAG00000009488	-	91	91.139	Jaculus_jaculus
ENSXMAG00000013463	rbm8a	100	97.714	ENSKMAG00000014454	rbm8a	100	97.714	Kryptolebias_marmoratus
ENSXMAG00000013463	rbm8a	99	94.304	ENSLBEG00000015720	rbm8a	90	95.570	Labrus_bergylta
ENSXMAG00000013463	rbm8a	97	89.172	ENSLACG00000014365	RBM8A	91	90.000	Latimeria_chalumnae
ENSXMAG00000013463	rbm8a	97	93.548	ENSLOCG00000009082	rbm8a	91	94.304	Lepisosteus_oculatus
ENSXMAG00000013463	rbm8a	100	64.848	ENSLAFG00000011031	-	92	64.417	Loxodonta_africana
ENSXMAG00000013463	rbm8a	97	90.323	ENSLAFG00000021886	-	91	91.139	Loxodonta_africana
ENSXMAG00000013463	rbm8a	94	90.066	ENSMFAG00000045376	RBM8A	91	91.139	Macaca_fascicularis
ENSXMAG00000013463	rbm8a	100	85.629	ENSMMUG00000016051	RBM8A	99	86.667	Macaca_mulatta
ENSXMAG00000013463	rbm8a	94	90.066	ENSMNEG00000040422	RBM8A	91	91.139	Macaca_nemestrina
ENSXMAG00000013463	rbm8a	94	90.066	ENSMLEG00000039155	RBM8A	91	91.139	Mandrillus_leucophaeus
ENSXMAG00000013463	rbm8a	99	93.671	ENSMAMG00000010565	rbm8a	90	94.937	Mastacembelus_armatus
ENSXMAG00000013463	rbm8a	100	96.571	ENSMZEG00005016453	rbm8a	100	96.571	Maylandia_zebra
ENSXMAG00000013463	rbm8a	100	84.118	ENSMAUG00000016783	-	99	85.119	Mesocricetus_auratus
ENSXMAG00000013463	rbm8a	94	90.066	ENSMICG00000031698	-	91	91.139	Microcebus_murinus
ENSXMAG00000013463	rbm8a	100	73.125	ENSMICG00000037163	-	99	73.125	Microcebus_murinus
ENSXMAG00000013463	rbm8a	94	90.066	ENSMOCG00000017782	-	91	91.139	Microtus_ochrogaster
ENSXMAG00000013463	rbm8a	100	83.544	ENSMMOG00000017179	rbm8a	94	83.544	Mola_mola
ENSXMAG00000013463	rbm8a	94	90.728	ENSMODG00000018752	RBM8A	91	91.772	Monodelphis_domestica
ENSXMAG00000013463	rbm8a	99	91.772	ENSMALG00000010145	rbm8a	90	93.038	Monopterus_albus
ENSXMAG00000013463	rbm8a	94	90.066	MGP_CAROLIEiJ_G0025383	Rbm8a	100	83.626	Mus_caroli
ENSXMAG00000013463	rbm8a	94	87.417	MGP_CAROLIEiJ_G0014951	Rbm8a2	91	88.608	Mus_caroli
ENSXMAG00000013463	rbm8a	94	90.066	ENSMUSG00000038374	Rbm8a	100	83.626	Mus_musculus
ENSXMAG00000013463	rbm8a	94	88.079	ENSMUSG00000078184	Rbm8a2	91	89.241	Mus_musculus
ENSXMAG00000013463	rbm8a	94	90.066	MGP_PahariEiJ_G0026828	-	100	83.626	Mus_pahari
ENSXMAG00000013463	rbm8a	94	90.066	MGP_SPRETEiJ_G0026330	Rbm8a	100	83.626	Mus_spretus
ENSXMAG00000013463	rbm8a	94	90.066	ENSMPUG00000000775	RBM8A	91	91.139	Mustela_putorius_furo
ENSXMAG00000013463	rbm8a	94	83.893	ENSMLUG00000022711	-	92	83.544	Myotis_lucifugus
ENSXMAG00000013463	rbm8a	94	90.066	ENSMLUG00000017436	-	91	91.139	Myotis_lucifugus
ENSXMAG00000013463	rbm8a	97	90.323	ENSNGAG00000016038	-	91	91.139	Nannospalax_galili
ENSXMAG00000013463	rbm8a	100	96.571	ENSNBRG00000004541	rbm8a	100	96.571	Neolamprologus_brichardi
ENSXMAG00000013463	rbm8a	94	90.066	ENSNLEG00000029632	RBM8A	91	91.139	Nomascus_leucogenys
ENSXMAG00000013463	rbm8a	68	92.593	ENSMEUG00000016058	RBM8A	89	92.308	Notamacropus_eugenii
ENSXMAG00000013463	rbm8a	71	90.351	ENSOPRG00000013316	RBM8A	100	92.105	Ochotona_princeps
ENSXMAG00000013463	rbm8a	94	75.497	ENSODEG00000002094	-	91	76.250	Octodon_degus
ENSXMAG00000013463	rbm8a	94	78.146	ENSODEG00000008563	-	92	78.750	Octodon_degus
ENSXMAG00000013463	rbm8a	94	90.066	ENSODEG00000000114	-	91	91.139	Octodon_degus
ENSXMAG00000013463	rbm8a	100	96.571	ENSONIG00000008608	rbm8a	100	96.571	Oreochromis_niloticus
ENSXMAG00000013463	rbm8a	94	88.312	ENSOCUG00000025693	RBM8A	91	89.441	Oryctolagus_cuniculus
ENSXMAG00000013463	rbm8a	99	93.671	ENSORLG00000016263	rbm8a	90	94.937	Oryzias_latipes
ENSXMAG00000013463	rbm8a	100	93.750	ENSORLG00020012904	rbm8a	84	94.937	Oryzias_latipes_hni
ENSXMAG00000013463	rbm8a	99	93.671	ENSORLG00015018824	rbm8a	90	94.937	Oryzias_latipes_hsok
ENSXMAG00000013463	rbm8a	99	94.304	ENSOMEG00000021533	rbm8a	71	95.570	Oryzias_melastigma
ENSXMAG00000013463	rbm8a	94	88.312	ENSOGAG00000000202	RBM8A	91	89.441	Otolemur_garnettii
ENSXMAG00000013463	rbm8a	94	89.404	ENSOARG00000020634	RBM8A	91	90.506	Ovis_aries
ENSXMAG00000013463	rbm8a	94	90.066	ENSPPAG00000029116	RBM8A	91	91.139	Pan_paniscus
ENSXMAG00000013463	rbm8a	94	89.404	ENSPPRG00000008243	RBM8A	91	90.506	Panthera_pardus
ENSXMAG00000013463	rbm8a	94	90.066	ENSPTIG00000009472	RBM8A	91	91.139	Panthera_tigris_altaica
ENSXMAG00000013463	rbm8a	94	90.066	ENSPTRG00000001201	RBM8A	91	91.139	Pan_troglodytes
ENSXMAG00000013463	rbm8a	94	90.066	ENSPANG00000020584	RBM8A	91	91.139	Papio_anubis
ENSXMAG00000013463	rbm8a	98	91.083	ENSPKIG00000009551	rbm8a	67	91.772	Paramormyrops_kingsleyae
ENSXMAG00000013463	rbm8a	97	91.503	ENSPKIG00000020558	rbm8a	92	91.139	Paramormyrops_kingsleyae
ENSXMAG00000013463	rbm8a	100	95.000	ENSPMGG00000010122	rbm8a	90	96.203	Periophthalmus_magnuspinnatus
ENSXMAG00000013463	rbm8a	94	90.066	ENSPEMG00000018117	-	91	91.139	Peromyscus_maniculatus_bairdii
ENSXMAG00000013463	rbm8a	94	90.728	ENSPCIG00000011931	RBM8A	91	91.772	Phascolarctos_cinereus
ENSXMAG00000013463	rbm8a	100	99.429	ENSPFOG00000010695	rbm8a	100	99.429	Poecilia_formosa
ENSXMAG00000013463	rbm8a	100	99.429	ENSPLAG00000009183	rbm8a	100	99.429	Poecilia_latipinna
ENSXMAG00000013463	rbm8a	100	99.429	ENSPMEG00000013950	rbm8a	100	99.429	Poecilia_mexicana
ENSXMAG00000013463	rbm8a	100	98.750	ENSPREG00000017572	rbm8a	100	100.000	Poecilia_reticulata
ENSXMAG00000013463	rbm8a	94	90.066	ENSPPYG00000000929	RBM8A	91	91.139	Pongo_abelii
ENSXMAG00000013463	rbm8a	97	89.677	ENSPCAG00000002146	-	91	90.506	Procavia_capensis
ENSXMAG00000013463	rbm8a	94	90.066	ENSPCOG00000022886	RBM8A	91	91.139	Propithecus_coquereli
ENSXMAG00000013463	rbm8a	94	90.066	ENSPVAG00000014471	RBM8A	91	91.139	Pteropus_vampyrus
ENSXMAG00000013463	rbm8a	100	96.571	ENSPNYG00000013564	rbm8a	100	96.571	Pundamilia_nyererei
ENSXMAG00000013463	rbm8a	97	94.194	ENSPNAG00000028502	rbm8a	91	94.937	Pygocentrus_nattereri
ENSXMAG00000013463	rbm8a	94	90.066	ENSRNOG00000021215	Rbm8a	91	91.139	Rattus_norvegicus
ENSXMAG00000013463	rbm8a	94	89.404	ENSRBIG00000039233	RBM8A	91	90.506	Rhinopithecus_bieti
ENSXMAG00000013463	rbm8a	94	90.066	ENSRROG00000040324	-	91	91.139	Rhinopithecus_roxellana
ENSXMAG00000013463	rbm8a	94	84.768	ENSRROG00000033023	-	91	85.443	Rhinopithecus_roxellana
ENSXMAG00000013463	rbm8a	94	90.066	ENSSBOG00000031316	RBM8A	91	91.139	Saimiri_boliviensis_boliviensis
ENSXMAG00000013463	rbm8a	94	90.728	ENSSHAG00000018629	RBM8A	91	91.772	Sarcophilus_harrisii
ENSXMAG00000013463	rbm8a	97	90.323	ENSSFOG00015024171	rbm8a	91	91.139	Scleropages_formosus
ENSXMAG00000013463	rbm8a	97	92.258	ENSSFOG00015009007	rbm8a	91	93.038	Scleropages_formosus
ENSXMAG00000013463	rbm8a	100	95.000	ENSSMAG00000012998	rbm8a	90	96.203	Scophthalmus_maximus
ENSXMAG00000013463	rbm8a	100	95.000	ENSSDUG00000005911	rbm8a	90	96.203	Seriola_dumerili
ENSXMAG00000013463	rbm8a	100	95.000	ENSSLDG00000011664	rbm8a	90	96.203	Seriola_lalandi_dorsalis
ENSXMAG00000013463	rbm8a	94	90.066	ENSSARG00000013289	RBM8A	91	91.139	Sorex_araneus
ENSXMAG00000013463	rbm8a	94	90.728	ENSSPUG00000001576	RBM8A	91	91.772	Sphenodon_punctatus
ENSXMAG00000013463	rbm8a	100	95.000	ENSSPAG00000012181	rbm8a	90	96.203	Stegastes_partitus
ENSXMAG00000013463	rbm8a	94	90.066	ENSSSCG00000028509	RBM8A	91	91.139	Sus_scrofa
ENSXMAG00000013463	rbm8a	94	87.417	ENSTGUG00000004447	RBM8A	91	88.608	Taeniopygia_guttata
ENSXMAG00000013463	rbm8a	100	96.203	ENSTRUG00000013173	rbm8a	91	96.203	Takifugu_rubripes
ENSXMAG00000013463	rbm8a	99	93.038	ENSTNIG00000006869	rbm8a	90	94.304	Tetraodon_nigroviridis
ENSXMAG00000013463	rbm8a	71	90.351	ENSTBEG00000014947	RBM8A	100	92.105	Tupaia_belangeri
ENSXMAG00000013463	rbm8a	81	90.625	ENSTTRG00000009081	RBM8A	91	90.511	Tursiops_truncatus
ENSXMAG00000013463	rbm8a	94	90.066	ENSUAMG00000021929	RBM8A	91	91.139	Ursus_americanus
ENSXMAG00000013463	rbm8a	94	90.066	ENSUMAG00000010298	RBM8A	91	91.139	Ursus_maritimus
ENSXMAG00000013463	rbm8a	94	90.066	ENSVVUG00000007486	RBM8A	91	91.139	Vulpes_vulpes
ENSXMAG00000013463	rbm8a	100	100.000	ENSXCOG00000004369	rbm8a	100	100.000	Xiphophorus_couchianus