EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013485 (Gene tree)
Gene ID: 102226385
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 7743 bases
Position: chr23:8434030-8441772
Accession: 102226385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013514	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSXMAP00000026242	MMR_HSR1	PF01926.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013530	-	1206	-	ENSXMAP00000013514	401 (aa)	-	M4AGC0
ENSXMAT00000025415	-	2099	XM_005799569	ENSXMAP00000026242	443 (aa)	XP_005799626	UPI0006D926DD

Gene Model

Click here to download ENSXMAG00000013485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013485's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013485	arl13a	99	74.396	ENSACIG00000012235	arl13a	100	78.313	Amphilophus_citrinellus
ENSXMAG00000013485	arl13a	94	77.698	ENSAOCG00000024309	arl13a	96	79.665	Amphiprion_ocellaris
ENSXMAG00000013485	arl13a	99	81.222	ENSAPEG00000006626	arl13a	100	82.844	Amphiprion_percula
ENSXMAG00000013485	arl13a	99	81.573	ENSATEG00000018113	arl13a	100	81.798	Anabas_testudineus
ENSXMAG00000013485	arl13a	99	78.000	ENSACLG00000000738	arl13a	100	78.313	Astatotilapia_calliptera
ENSXMAG00000013485	arl13a	99	55.904	ENSAMXG00000021495	arl13a	98	58.894	Astyanax_mexicanus
ENSXMAG00000013485	arl13a	53	51.402	ENSCPBG00000014304	ARL13A	84	50.442	Chrysemys_picta_bellii
ENSXMAG00000013485	arl13a	50	39.512	ENSCGRG00001021947	Arl13a	53	39.512	Cricetulus_griseus_chok1gshd
ENSXMAG00000013485	arl13a	50	39.512	ENSCGRG00000007297	Arl13a	53	39.512	Cricetulus_griseus_crigri
ENSXMAG00000013485	arl13a	99	55.896	ENSCSEG00000002533	arl13a	100	60.000	Cynoglossus_semilaevis
ENSXMAG00000013485	arl13a	100	89.391	ENSCVAG00000005783	arl13a	100	89.391	Cyprinodon_variegatus
ENSXMAG00000013485	arl13a	99	67.347	ENSDARG00000052575	arl13a	99	66.667	Danio_rerio
ENSXMAG00000013485	arl13a	100	89.391	ENSFHEG00000017023	arl13a	100	89.391	Fundulus_heteroclitus
ENSXMAG00000013485	arl13a	100	95.711	ENSGAFG00000019994	arl13a	100	95.711	Gambusia_affinis
ENSXMAG00000013485	arl13a	99	70.146	ENSGACG00000017318	arl13a	99	71.496	Gasterosteus_aculeatus
ENSXMAG00000013485	arl13a	99	81.859	ENSHBUG00000016100	arl13a	100	82.313	Haplochromis_burtoni
ENSXMAG00000013485	arl13a	99	64.678	ENSHCOG00000005206	arl13a	100	68.585	Hippocampus_comes
ENSXMAG00000013485	arl13a	99	56.468	ENSIPUG00000017720	arl13a	99	59.712	Ictalurus_punctatus
ENSXMAG00000013485	arl13a	99	77.703	ENSKMAG00000001139	arl13a	99	77.201	Kryptolebias_marmoratus
ENSXMAG00000013485	arl13a	100	77.652	ENSLBEG00000028724	arl13a	100	78.104	Labrus_bergylta
ENSXMAG00000013485	arl13a	99	53.795	ENSLOCG00000015307	arl13a	99	53.394	Lepisosteus_oculatus
ENSXMAG00000013485	arl13a	94	73.697	ENSMAMG00000020385	arl13a	100	73.697	Mastacembelus_armatus
ENSXMAG00000013485	arl13a	99	81.859	ENSMZEG00005007052	arl13a	100	82.313	Maylandia_zebra
ENSXMAG00000013485	arl13a	66	32.997	ENSMAUG00000010729	-	51	40.000	Mesocricetus_auratus
ENSXMAG00000013485	arl13a	66	32.997	ENSMAUG00000001355	-	51	40.000	Mesocricetus_auratus
ENSXMAG00000013485	arl13a	99	68.766	ENSMMOG00000000880	arl13a	99	67.711	Mola_mola
ENSXMAG00000013485	arl13a	94	67.788	ENSMALG00000009029	arl13a	100	70.574	Monopterus_albus
ENSXMAG00000013485	arl13a	50	40.686	MGP_CAROLIEiJ_G0033386	Arl13a	53	40.686	Mus_caroli
ENSXMAG00000013485	arl13a	50	42.647	ENSMUSG00000052549	Arl13a	54	42.647	Mus_musculus
ENSXMAG00000013485	arl13a	50	42.157	MGP_PahariEiJ_G0031926	Arl13a	53	42.157	Mus_pahari
ENSXMAG00000013485	arl13a	50	42.647	MGP_SPRETEiJ_G0034551	Arl13a	53	42.647	Mus_spretus
ENSXMAG00000013485	arl13a	99	78.164	ENSNBRG00000021766	arl13a	100	76.316	Neolamprologus_brichardi
ENSXMAG00000013485	arl13a	99	75.721	ENSONIG00000002645	arl13a	100	79.187	Oreochromis_niloticus
ENSXMAG00000013485	arl13a	99	78.604	ENSORLG00000001425	arl13a	100	78.005	Oryzias_latipes
ENSXMAG00000013485	arl13a	99	78.005	ENSORLG00020021844	arl13a	100	78.005	Oryzias_latipes_hni
ENSXMAG00000013485	arl13a	99	78.829	ENSORLG00015011862	arl13a	100	78.231	Oryzias_latipes_hsok
ENSXMAG00000013485	arl13a	99	78.378	ENSOMEG00000015603	arl13a	100	78.005	Oryzias_melastigma
ENSXMAG00000013485	arl13a	99	57.650	ENSPKIG00000013558	arl13a	99	57.809	Paramormyrops_kingsleyae
ENSXMAG00000013485	arl13a	55	52.489	ENSPSIG00000003515	ARL13A	98	52.489	Pelodiscus_sinensis
ENSXMAG00000013485	arl13a	99	59.579	ENSPMGG00000017973	arl13a	100	64.678	Periophthalmus_magnuspinnatus
ENSXMAG00000013485	arl13a	100	96.388	ENSPFOG00000016707	arl13a	100	96.388	Poecilia_formosa
ENSXMAG00000013485	arl13a	100	92.519	ENSPLAG00000011307	arl13a	100	92.519	Poecilia_latipinna
ENSXMAG00000013485	arl13a	100	96.840	ENSPMEG00000017855	arl13a	100	96.840	Poecilia_mexicana
ENSXMAG00000013485	arl13a	100	95.711	ENSPREG00000011435	arl13a	100	95.711	Poecilia_reticulata
ENSXMAG00000013485	arl13a	99	78.250	ENSPNYG00000011485	arl13a	100	78.554	Pundamilia_nyererei
ENSXMAG00000013485	arl13a	50	41.667	ENSRNOG00000055454	Arl13a	51	41.667	Rattus_norvegicus
ENSXMAG00000013485	arl13a	99	53.957	ENSSFOG00015010065	arl13a	99	59.091	Scleropages_formosus
ENSXMAG00000013485	arl13a	99	73.134	ENSSMAG00000013557	arl13a	100	74.760	Scophthalmus_maximus
ENSXMAG00000013485	arl13a	99	73.815	ENSSDUG00000000933	arl13a	100	73.750	Seriola_dumerili
ENSXMAG00000013485	arl13a	99	80.361	ENSSLDG00000009973	arl13a	100	79.864	Seriola_lalandi_dorsalis
ENSXMAG00000013485	arl13a	99	73.183	ENSSPAG00000009109	arl13a	96	82.946	Stegastes_partitus
ENSXMAG00000013485	arl13a	99	95.050	ENSXCOG00000016270	arl13a	99	95.050	Xiphophorus_couchianus