EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013498 (Gene tree)
Gene ID: 102233837
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 12806 bases
Position: chr22:13225614-13238419
Accession: 102233837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013564	NUC173	PF08161.12	2.6e-75	1	1
ENSXMAP00000027059	NUC173	PF08161.12	2.1e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013580	-	5012	XM_014469283	ENSXMAP00000013564	1290 (aa)	XP_014324769	M4AGH0
ENSXMAT00000037203	-	3771	-	ENSXMAP00000027059	1256 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000013498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013498	rrp12	92	76.316	ENSG00000052749	RRP12	100	76.705	Homo_sapiens
ENSXMAG00000013498	rrp12	99	85.248	ENSAPOG00000013355	rrp12	99	84.977	Acanthochromis_polyacanthus
ENSXMAG00000013498	rrp12	99	63.951	ENSAMEG00000000134	RRP12	99	64.396	Ailuropoda_melanoleuca
ENSXMAG00000013498	rrp12	99	87.510	ENSACIG00000022673	rrp12	99	87.276	Amphilophus_citrinellus
ENSXMAG00000013498	rrp12	99	88.134	ENSAOCG00000016149	rrp12	99	87.900	Amphiprion_ocellaris
ENSXMAG00000013498	rrp12	99	86.693	ENSAPEG00000016023	rrp12	99	86.381	Amphiprion_percula
ENSXMAG00000013498	rrp12	99	86.672	ENSATEG00000022627	rrp12	99	86.438	Anabas_testudineus
ENSXMAG00000013498	rrp12	97	60.382	ENSAPLG00000014387	RRP12	99	60.176	Anas_platyrhynchos
ENSXMAG00000013498	rrp12	99	59.537	ENSACAG00000002175	RRP12	99	59.550	Anolis_carolinensis
ENSXMAG00000013498	rrp12	92	75.658	ENSANAG00000037485	RRP12	99	64.158	Aotus_nancymaae
ENSXMAG00000013498	rrp12	99	85.636	ENSACLG00000007354	rrp12	99	85.402	Astatotilapia_calliptera
ENSXMAG00000013498	rrp12	99	75.621	ENSAMXG00000012852	rrp12	99	75.703	Astyanax_mexicanus
ENSXMAG00000013498	rrp12	99	63.308	ENSBTAG00000002191	RRP12	99	63.594	Bos_taurus
ENSXMAG00000013498	rrp12	85	61.636	ENSCJAG00000016549	-	99	61.918	Callithrix_jacchus
ENSXMAG00000013498	rrp12	99	63.902	ENSCAFG00000009043	RRP12	99	64.114	Canis_familiaris
ENSXMAG00000013498	rrp12	99	63.902	ENSCAFG00020005991	RRP12	99	64.114	Canis_lupus_dingo
ENSXMAG00000013498	rrp12	99	61.603	ENSCHIG00000011876	RRP12	99	61.201	Capra_hircus
ENSXMAG00000013498	rrp12	53	55.603	ENSTSYG00000030210	-	98	55.797	Carlito_syrichta
ENSXMAG00000013498	rrp12	97	57.861	ENSCAPG00000008991	RRP12	97	58.005	Cavia_aperea
ENSXMAG00000013498	rrp12	100	63.174	ENSCPOG00000004215	RRP12	99	63.354	Cavia_porcellus
ENSXMAG00000013498	rrp12	80	66.232	ENSCCAG00000024088	RRP12	99	67.939	Cebus_capucinus
ENSXMAG00000013498	rrp12	70	58.901	ENSCCAG00000033123	-	82	59.051	Cebus_capucinus
ENSXMAG00000013498	rrp12	99	59.615	ENSCATG00000045310	RRP12	99	60.031	Cercocebus_atys
ENSXMAG00000013498	rrp12	100	62.741	ENSCLAG00000003753	RRP12	99	63.227	Chinchilla_lanigera
ENSXMAG00000013498	rrp12	88	62.108	ENSCSAG00000005877	RRP12	99	62.511	Chlorocebus_sabaeus
ENSXMAG00000013498	rrp12	61	71.048	ENSCHOG00000003095	-	60	71.048	Choloepus_hoffmanni
ENSXMAG00000013498	rrp12	94	65.293	ENSCPBG00000011935	RRP12	97	65.477	Chrysemys_picta_bellii
ENSXMAG00000013498	rrp12	63	41.354	ENSCSAVG00000006059	-	99	41.010	Ciona_savignyi
ENSXMAG00000013498	rrp12	92	76.316	ENSCANG00000031653	RRP12	99	64.419	Colobus_angolensis_palliatus
ENSXMAG00000013498	rrp12	90	63.512	ENSCGRG00001004338	Rrp12	99	63.979	Cricetulus_griseus_chok1gshd
ENSXMAG00000013498	rrp12	99	63.194	ENSCGRG00000011965	Rrp12	99	63.615	Cricetulus_griseus_crigri
ENSXMAG00000013498	rrp12	99	82.713	ENSCSEG00000007799	rrp12	99	83.073	Cynoglossus_semilaevis
ENSXMAG00000013498	rrp12	99	92.734	ENSCVAG00000003418	rrp12	99	92.578	Cyprinodon_variegatus
ENSXMAG00000013498	rrp12	99	73.819	ENSDARG00000022410	rrp12	99	74.181	Danio_rerio
ENSXMAG00000013498	rrp12	100	63.085	ENSDNOG00000005120	RRP12	99	63.418	Dasypus_novemcinctus
ENSXMAG00000013498	rrp12	99	63.336	ENSDORG00000009199	Rrp12	99	64.114	Dipodomys_ordii
ENSXMAG00000013498	rrp12	91	67.143	ENSETEG00000002455	RRP12	92	67.143	Echinops_telfairi
ENSXMAG00000013498	rrp12	90	50.633	ENSEBUG00000006555	rrp12	96	68.421	Eptatretus_burgeri
ENSXMAG00000013498	rrp12	99	64.022	ENSEASG00005008693	RRP12	99	64.469	Equus_asinus_asinus
ENSXMAG00000013498	rrp12	94	63.770	ENSECAG00000010892	RRP12	99	64.327	Equus_caballus
ENSXMAG00000013498	rrp12	68	54.412	ENSEEUG00000005447	-	64	57.941	Erinaceus_europaeus
ENSXMAG00000013498	rrp12	99	77.364	ENSELUG00000010510	rrp12	100	77.392	Esox_lucius
ENSXMAG00000013498	rrp12	92	76.316	ENSFCAG00000028639	RRP12	99	64.424	Felis_catus
ENSXMAG00000013498	rrp12	94	63.517	ENSFALG00000008458	RRP12	99	63.568	Ficedula_albicollis
ENSXMAG00000013498	rrp12	99	63.174	ENSFDAG00000019108	RRP12	95	63.460	Fukomys_damarensis
ENSXMAG00000013498	rrp12	99	83.229	ENSFHEG00000004148	rrp12	99	82.761	Fundulus_heteroclitus
ENSXMAG00000013498	rrp12	99	70.170	ENSGMOG00000004188	rrp12	99	70.117	Gadus_morhua
ENSXMAG00000013498	rrp12	99	63.398	ENSGALG00000041331	RRP12	96	64.786	Gallus_gallus
ENSXMAG00000013498	rrp12	100	97.984	ENSGAFG00000009038	rrp12	100	97.984	Gambusia_affinis
ENSXMAG00000013498	rrp12	99	83.607	ENSGACG00000007175	rrp12	99	83.685	Gasterosteus_aculeatus
ENSXMAG00000013498	rrp12	69	67.742	ENSGAGG00000019169	RRP12	96	67.742	Gopherus_agassizii
ENSXMAG00000013498	rrp12	92	76.316	ENSGGOG00000014850	RRP12	99	64.524	Gorilla_gorilla
ENSXMAG00000013498	rrp12	99	86.027	ENSHBUG00000023527	rrp12	99	85.792	Haplochromis_burtoni
ENSXMAG00000013498	rrp12	99	63.300	ENSHGLG00000016772	RRP12	99	63.615	Heterocephalus_glaber_female
ENSXMAG00000013498	rrp12	99	63.300	ENSHGLG00100015110	RRP12	99	63.615	Heterocephalus_glaber_male
ENSXMAG00000013498	rrp12	100	80.253	ENSHCOG00000019519	rrp12	99	80.414	Hippocampus_comes
ENSXMAG00000013498	rrp12	100	74.381	ENSIPUG00000000311	RRP12	99	74.571	Ictalurus_punctatus
ENSXMAG00000013498	rrp12	99	64.225	ENSSTOG00000006515	RRP12	99	64.363	Ictidomys_tridecemlineatus
ENSXMAG00000013498	rrp12	96	63.070	ENSJJAG00000000110	Rrp12	98	63.205	Jaculus_jaculus
ENSXMAG00000013498	rrp12	99	89.071	ENSKMAG00000020621	rrp12	99	88.672	Kryptolebias_marmoratus
ENSXMAG00000013498	rrp12	99	80.915	ENSLBEG00000015335	rrp12	99	81.187	Labrus_bergylta
ENSXMAG00000013498	rrp12	72	64.794	ENSLACG00000016633	RRP12	82	64.794	Latimeria_chalumnae
ENSXMAG00000013498	rrp12	100	70.849	ENSLOCG00000003846	rrp12	99	70.856	Lepisosteus_oculatus
ENSXMAG00000013498	rrp12	99	64.055	ENSLAFG00000015965	RRP12	99	63.728	Loxodonta_africana
ENSXMAG00000013498	rrp12	92	75.658	ENSMFAG00000041558	RRP12	99	64.341	Macaca_fascicularis
ENSXMAG00000013498	rrp12	92	75.658	ENSMMUG00000019634	RRP12	99	64.341	Macaca_mulatta
ENSXMAG00000013498	rrp12	92	75.658	ENSMNEG00000036759	RRP12	99	61.550	Macaca_nemestrina
ENSXMAG00000013498	rrp12	92	76.316	ENSMLEG00000041317	RRP12	99	61.501	Mandrillus_leucophaeus
ENSXMAG00000013498	rrp12	99	84.848	ENSMAMG00000002964	rrp12	99	86.439	Mastacembelus_armatus
ENSXMAG00000013498	rrp12	99	85.714	ENSMZEG00005003241	rrp12	99	85.480	Maylandia_zebra
ENSXMAG00000013498	rrp12	99	61.556	ENSMGAG00000009829	RRP12	99	61.503	Meleagris_gallopavo
ENSXMAG00000013498	rrp12	99	61.343	ENSMAUG00000020743	Rrp12	99	61.234	Mesocricetus_auratus
ENSXMAG00000013498	rrp12	99	63.895	ENSMICG00000007624	RRP12	99	64.109	Microcebus_murinus
ENSXMAG00000013498	rrp12	100	63.818	ENSMOCG00000006753	Rrp12	99	64.186	Microtus_ochrogaster
ENSXMAG00000013498	rrp12	100	82.848	ENSMMOG00000010708	rrp12	99	82.698	Mola_mola
ENSXMAG00000013498	rrp12	99	64.114	ENSMODG00000004315	RRP12	99	64.386	Monodelphis_domestica
ENSXMAG00000013498	rrp12	99	81.176	ENSMALG00000016560	rrp12	99	85.436	Monopterus_albus
ENSXMAG00000013498	rrp12	99	62.977	MGP_CAROLIEiJ_G0022957	Rrp12	99	63.182	Mus_caroli
ENSXMAG00000013498	rrp12	99	63.636	ENSMUSG00000035049	Rrp12	99	63.848	Mus_musculus
ENSXMAG00000013498	rrp12	100	63.587	MGP_PahariEiJ_G0014447	Rrp12	99	63.848	Mus_pahari
ENSXMAG00000013498	rrp12	99	63.713	MGP_SPRETEiJ_G0023878	Rrp12	99	63.926	Mus_spretus
ENSXMAG00000013498	rrp12	99	63.769	ENSMPUG00000017046	RRP12	99	64.136	Mustela_putorius_furo
ENSXMAG00000013498	rrp12	99	64.160	ENSMLUG00000017160	RRP12	99	64.297	Myotis_lucifugus
ENSXMAG00000013498	rrp12	99	63.945	ENSNGAG00000024144	Rrp12	99	64.081	Nannospalax_galili
ENSXMAG00000013498	rrp12	99	84.762	ENSNBRG00000009987	rrp12	99	84.286	Neolamprologus_brichardi
ENSXMAG00000013498	rrp12	99	56.111	ENSNLEG00000013762	RRP12	99	56.235	Nomascus_leucogenys
ENSXMAG00000013498	rrp12	100	58.469	ENSMEUG00000003185	RRP12	99	58.613	Notamacropus_eugenii
ENSXMAG00000013498	rrp12	94	67.388	ENSOPRG00000005001	RRP12	93	67.388	Ochotona_princeps
ENSXMAG00000013498	rrp12	100	62.771	ENSODEG00000016439	RRP12	99	63.027	Octodon_degus
ENSXMAG00000013498	rrp12	99	86.495	ENSONIG00000009528	rrp12	99	86.261	Oreochromis_niloticus
ENSXMAG00000013498	rrp12	100	59.862	ENSOANG00000006560	RRP12	99	59.474	Ornithorhynchus_anatinus
ENSXMAG00000013498	rrp12	99	63.117	ENSOCUG00000005662	RRP12	99	63.898	Oryctolagus_cuniculus
ENSXMAG00000013498	rrp12	99	85.792	ENSORLG00000008688	rrp12	99	85.605	Oryzias_latipes
ENSXMAG00000013498	rrp12	97	86.328	ENSORLG00020002355	rrp12	99	86.010	Oryzias_latipes_hni
ENSXMAG00000013498	rrp12	99	85.792	ENSORLG00015006709	rrp12	99	85.558	Oryzias_latipes_hsok
ENSXMAG00000013498	rrp12	97	86.328	ENSOMEG00000002609	rrp12	99	86.248	Oryzias_melastigma
ENSXMAG00000013498	rrp12	99	63.134	ENSOGAG00000001626	RRP12	99	63.032	Otolemur_garnettii
ENSXMAG00000013498	rrp12	99	62.807	ENSOARG00000009681	RRP12	99	62.645	Ovis_aries
ENSXMAG00000013498	rrp12	92	76.316	ENSPPAG00000043885	RRP12	99	62.122	Pan_paniscus
ENSXMAG00000013498	rrp12	92	75.658	ENSPPRG00000002029	RRP12	99	64.269	Panthera_pardus
ENSXMAG00000013498	rrp12	92	76.316	ENSPTIG00000004428	RRP12	99	61.516	Panthera_tigris_altaica
ENSXMAG00000013498	rrp12	92	76.316	ENSPTRG00000002806	RRP12	99	62.355	Pan_troglodytes
ENSXMAG00000013498	rrp12	92	76.316	ENSPANG00000021360	RRP12	99	64.419	Papio_anubis
ENSXMAG00000013498	rrp12	100	73.246	ENSPKIG00000016516	rrp12	99	73.815	Paramormyrops_kingsleyae
ENSXMAG00000013498	rrp12	99	81.045	ENSPMGG00000020217	rrp12	99	80.499	Periophthalmus_magnuspinnatus
ENSXMAG00000013498	rrp12	99	63.917	ENSPEMG00000008437	Rrp12	99	64.291	Peromyscus_maniculatus_bairdii
ENSXMAG00000013498	rrp12	99	46.746	ENSPMAG00000007493	rrp12	87	52.832	Petromyzon_marinus
ENSXMAG00000013498	rrp12	99	63.672	ENSPCIG00000002157	RRP12	99	63.757	Phascolarctos_cinereus
ENSXMAG00000013498	rrp12	100	96.512	ENSPFOG00000014975	rrp12	100	96.512	Poecilia_formosa
ENSXMAG00000013498	rrp12	100	96.434	ENSPLAG00000009840	rrp12	100	96.434	Poecilia_latipinna
ENSXMAG00000013498	rrp12	100	96.512	ENSPMEG00000021871	rrp12	100	96.512	Poecilia_mexicana
ENSXMAG00000013498	rrp12	99	93.012	ENSPREG00000020950	rrp12	99	93.012	Poecilia_reticulata
ENSXMAG00000013498	rrp12	99	63.462	ENSPPYG00000002528	RRP12	99	63.594	Pongo_abelii
ENSXMAG00000013498	rrp12	94	77.401	ENSPCAG00000008967	RRP12	94	77.401	Procavia_capensis
ENSXMAG00000013498	rrp12	99	76.974	ENSPCOG00000014009	RRP12	99	64.463	Propithecus_coquereli
ENSXMAG00000013498	rrp12	99	61.201	ENSPVAG00000003370	RRP12	99	61.318	Pteropus_vampyrus
ENSXMAG00000013498	rrp12	99	86.105	ENSPNYG00000009451	rrp12	99	85.870	Pundamilia_nyererei
ENSXMAG00000013498	rrp12	94	85.455	ENSPNAG00000007658	rrp12	99	76.406	Pygocentrus_nattereri
ENSXMAG00000013498	rrp12	99	63.300	ENSRNOG00000048495	Rrp12	99	63.587	Rattus_norvegicus
ENSXMAG00000013498	rrp12	92	76.316	ENSRBIG00000021296	RRP12	99	64.341	Rhinopithecus_bieti
ENSXMAG00000013498	rrp12	92	76.316	ENSRROG00000032482	RRP12	99	64.264	Rhinopithecus_roxellana
ENSXMAG00000013498	rrp12	92	75.000	ENSSBOG00000030992	RRP12	99	63.953	Saimiri_boliviensis_boliviensis
ENSXMAG00000013498	rrp12	99	63.439	ENSSHAG00000018275	RRP12	99	63.502	Sarcophilus_harrisii
ENSXMAG00000013498	rrp12	99	75.718	ENSSFOG00015016400	rrp12	99	76.034	Scleropages_formosus
ENSXMAG00000013498	rrp12	99	85.078	ENSSMAG00000004047	rrp12	99	85.234	Scophthalmus_maximus
ENSXMAG00000013498	rrp12	99	87.266	ENSSDUG00000022871	rrp12	99	87.344	Seriola_dumerili
ENSXMAG00000013498	rrp12	99	86.953	ENSSLDG00000003038	rrp12	99	87.031	Seriola_lalandi_dorsalis
ENSXMAG00000013498	rrp12	99	61.717	ENSSPUG00000012221	RRP12	99	61.772	Sphenodon_punctatus
ENSXMAG00000013498	rrp12	99	88.056	ENSSPAG00000002261	rrp12	99	88.212	Stegastes_partitus
ENSXMAG00000013498	rrp12	100	63.125	ENSSSCG00000010514	RRP12	99	63.382	Sus_scrofa
ENSXMAG00000013498	rrp12	89	60.122	ENSTGUG00000009711	RRP12	99	60.334	Taeniopygia_guttata
ENSXMAG00000013498	rrp12	100	78.605	ENSTRUG00000012017	rrp12	99	78.438	Takifugu_rubripes
ENSXMAG00000013498	rrp12	100	83.811	ENSTNIG00000016522	rrp12	99	83.516	Tetraodon_nigroviridis
ENSXMAG00000013498	rrp12	78	73.529	ENSTBEG00000004907	RRP12	79	73.529	Tupaia_belangeri
ENSXMAG00000013498	rrp12	100	61.894	ENSTTRG00000009878	RRP12	99	61.831	Tursiops_truncatus
ENSXMAG00000013498	rrp12	99	64.236	ENSUAMG00000009092	RRP12	99	64.606	Ursus_americanus
ENSXMAG00000013498	rrp12	99	62.394	ENSUMAG00000021621	RRP12	99	62.771	Ursus_maritimus
ENSXMAG00000013498	rrp12	99	64.136	ENSVVUG00000023168	RRP12	99	64.136	Vulpes_vulpes
ENSXMAG00000013498	rrp12	99	65.659	ENSXETG00000003430	rrp12	99	65.835	Xenopus_tropicalis
ENSXMAG00000013498	rrp12	98	93.614	ENSXCOG00000012082	rrp12	97	97.854	Xiphophorus_couchianus