EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013595 (Gene tree)
Gene ID: 102233070
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 6021 bases
Position: chr3:10843092-10849112
Accession: 102233070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013627	zf-U11-48K	PF05253.12	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013643	-	1029	XM_023331064	ENSXMAP00000013627	342 (aa)	XP_023186832	M4AGN3

Gene Model

Click here to download ENSXMAG00000013595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013595	snrnp48	81	45.015	ENSG00000168566	SNRNP48	82	49.821	Homo_sapiens
ENSXMAG00000013595	snrnp48	96	74.695	ENSAPOG00000021430	snrnp48	95	75.153	Acanthochromis_polyacanthus
ENSXMAG00000013595	snrnp48	93	44.214	ENSAMEG00000017349	SNRNP48	71	50.202	Ailuropoda_melanoleuca
ENSXMAG00000013595	snrnp48	94	70.717	ENSACIG00000002032	snrnp48	95	71.037	Amphilophus_citrinellus
ENSXMAG00000013595	snrnp48	95	73.006	ENSAOCG00000010562	snrnp48	95	73.620	Amphiprion_ocellaris
ENSXMAG00000013595	snrnp48	95	73.313	ENSAPEG00000003231	snrnp48	95	73.926	Amphiprion_percula
ENSXMAG00000013595	snrnp48	93	75.466	ENSATEG00000020210	snrnp48	94	76.087	Anabas_testudineus
ENSXMAG00000013595	snrnp48	81	50.000	ENSACAG00000002811	SNRNP48	87	48.239	Anolis_carolinensis
ENSXMAG00000013595	snrnp48	81	45.317	ENSANAG00000033538	SNRNP48	82	50.179	Aotus_nancymaae
ENSXMAG00000013595	snrnp48	94	56.269	ENSAMXG00000015309	snrnp48	78	64.368	Astyanax_mexicanus
ENSXMAG00000013595	snrnp48	92	44.478	ENSBTAG00000001123	SNRNP48	73	49.402	Bos_taurus
ENSXMAG00000013595	snrnp48	81	45.317	ENSCJAG00000021330	SNRNP48	82	50.179	Callithrix_jacchus
ENSXMAG00000013595	snrnp48	92	44.776	ENSCAFG00000009574	SNRNP48	67	48.551	Canis_familiaris
ENSXMAG00000013595	snrnp48	92	44.444	ENSCAFG00020013203	SNRNP48	81	48.188	Canis_lupus_dingo
ENSXMAG00000013595	snrnp48	92	44.179	ENSCHIG00000015216	SNRNP48	73	49.402	Capra_hircus
ENSXMAG00000013595	snrnp48	81	44.172	ENSTSYG00000000698	SNRNP48	82	49.104	Carlito_syrichta
ENSXMAG00000013595	snrnp48	87	45.253	ENSCAPG00000006768	SNRNP48	76	51.709	Cavia_aperea
ENSXMAG00000013595	snrnp48	93	45.858	ENSCPOG00000007910	SNRNP48	82	49.104	Cavia_porcellus
ENSXMAG00000013595	snrnp48	80	44.817	ENSCCAG00000035652	SNRNP48	81	49.638	Cebus_capucinus
ENSXMAG00000013595	snrnp48	93	45.322	ENSCATG00000033947	SNRNP48	82	49.462	Cercocebus_atys
ENSXMAG00000013595	snrnp48	81	45.399	ENSCLAG00000003765	SNRNP48	83	48.944	Chinchilla_lanigera
ENSXMAG00000013595	snrnp48	81	45.399	ENSCSAG00000007409	SNRNP48	82	50.179	Chlorocebus_sabaeus
ENSXMAG00000013595	snrnp48	83	46.205	ENSCPBG00000019146	SNRNP48	66	53.991	Chrysemys_picta_bellii
ENSXMAG00000013595	snrnp48	81	45.317	ENSCANG00000030017	SNRNP48	82	50.179	Colobus_angolensis_palliatus
ENSXMAG00000013595	snrnp48	93	45.428	ENSCGRG00001001076	-	84	48.592	Cricetulus_griseus_chok1gshd
ENSXMAG00000013595	snrnp48	80	42.606	ENSCGRG00001008805	-	80	43.969	Cricetulus_griseus_chok1gshd
ENSXMAG00000013595	snrnp48	93	45.428	ENSCGRG00000007781	Snrnp48	84	48.592	Cricetulus_griseus_crigri
ENSXMAG00000013595	snrnp48	94	65.109	ENSCSEG00000000722	snrnp48	90	63.551	Cynoglossus_semilaevis
ENSXMAG00000013595	snrnp48	92	83.067	ENSCVAG00000019829	snrnp48	72	85.971	Cyprinodon_variegatus
ENSXMAG00000013595	snrnp48	92	54.062	ENSDARG00000039989	snrnp48	79	57.407	Danio_rerio
ENSXMAG00000013595	snrnp48	75	48.375	ENSDNOG00000014978	SNRNP48	81	48.014	Dasypus_novemcinctus
ENSXMAG00000013595	snrnp48	93	43.658	ENSDORG00000015140	Snrnp48	82	47.143	Dipodomys_ordii
ENSXMAG00000013595	snrnp48	81	44.479	ENSEASG00005012021	SNRNP48	82	49.104	Equus_asinus_asinus
ENSXMAG00000013595	snrnp48	81	44.479	ENSECAG00000026937	SNRNP48	82	49.104	Equus_caballus
ENSXMAG00000013595	snrnp48	93	31.343	ENSEEUG00000015437	SNRNP48	79	33.948	Erinaceus_europaeus
ENSXMAG00000013595	snrnp48	94	58.017	ENSELUG00000009766	snrnp48	73	63.985	Esox_lucius
ENSXMAG00000013595	snrnp48	80	43.653	ENSFCAG00000018853	SNRNP48	81	48.188	Felis_catus
ENSXMAG00000013595	snrnp48	68	55.417	ENSFALG00000007797	SNRNP48	65	60.000	Ficedula_albicollis
ENSXMAG00000013595	snrnp48	93	45.428	ENSFDAG00000009231	SNRNP48	73	51.394	Fukomys_damarensis
ENSXMAG00000013595	snrnp48	64	86.547	ENSFHEG00000014647	snrnp48	95	84.838	Fundulus_heteroclitus
ENSXMAG00000013595	snrnp48	90	61.006	ENSGMOG00000018599	-	81	69.884	Gadus_morhua
ENSXMAG00000013595	snrnp48	77	51.493	ENSGALG00000013005	SNRNP48	68	59.024	Gallus_gallus
ENSXMAG00000013595	snrnp48	95	95.399	ENSGAFG00000021639	snrnp48	95	95.399	Gambusia_affinis
ENSXMAG00000013595	snrnp48	73	76.800	ENSGACG00000017756	-	76	77.559	Gasterosteus_aculeatus
ENSXMAG00000013595	snrnp48	83	46.358	ENSGAGG00000000865	SNRNP48	69	53.774	Gopherus_agassizii
ENSXMAG00000013595	snrnp48	81	45.317	ENSGGOG00000013220	SNRNP48	82	50.179	Gorilla_gorilla
ENSXMAG00000013595	snrnp48	94	76.012	ENSHBUG00000017066	snrnp48	94	75.610	Haplochromis_burtoni
ENSXMAG00000013595	snrnp48	81	43.865	ENSHGLG00000015241	SNRNP48	82	48.387	Heterocephalus_glaber_female
ENSXMAG00000013595	snrnp48	81	43.865	ENSHGLG00100010027	SNRNP48	82	48.387	Heterocephalus_glaber_male
ENSXMAG00000013595	snrnp48	74	72.047	ENSHCOG00000014066	snrnp48	94	65.361	Hippocampus_comes
ENSXMAG00000013595	snrnp48	81	44.785	ENSSTOG00000014635	SNRNP48	83	48.239	Ictidomys_tridecemlineatus
ENSXMAG00000013595	snrnp48	70	51.417	ENSJJAG00000011495	Snrnp48	72	51.417	Jaculus_jaculus
ENSXMAG00000013595	snrnp48	95	77.676	ENSKMAG00000016514	snrnp48	95	77.676	Kryptolebias_marmoratus
ENSXMAG00000013595	snrnp48	81	74.101	ENSLBEG00000026249	snrnp48	95	73.089	Labrus_bergylta
ENSXMAG00000013595	snrnp48	91	49.845	ENSLACG00000003958	SNRNP48	80	52.381	Latimeria_chalumnae
ENSXMAG00000013595	snrnp48	85	59.450	ENSLOCG00000004187	snrnp48	81	60.219	Lepisosteus_oculatus
ENSXMAG00000013595	snrnp48	76	49.643	ENSLAFG00000011152	SNRNP48	82	49.643	Loxodonta_africana
ENSXMAG00000013595	snrnp48	81	45.317	ENSMFAG00000045216	SNRNP48	82	50.179	Macaca_fascicularis
ENSXMAG00000013595	snrnp48	81	45.317	ENSMMUG00000014785	SNRNP48	82	50.179	Macaca_mulatta
ENSXMAG00000013595	snrnp48	81	45.706	ENSMNEG00000042269	SNRNP48	82	50.538	Macaca_nemestrina
ENSXMAG00000013595	snrnp48	81	45.317	ENSMLEG00000034004	SNRNP48	82	50.179	Mandrillus_leucophaeus
ENSXMAG00000013595	snrnp48	95	71.037	ENSMAMG00000018673	snrnp48	83	72.256	Mastacembelus_armatus
ENSXMAG00000013595	snrnp48	76	48.814	ENSMGAG00000006037	SNRNP48	68	58.537	Meleagris_gallopavo
ENSXMAG00000013595	snrnp48	96	43.678	ENSMAUG00000011944	Snrnp48	85	47.569	Mesocricetus_auratus
ENSXMAG00000013595	snrnp48	80	48.057	ENSMICG00000012497	SNRNP48	82	48.929	Microcebus_murinus
ENSXMAG00000013595	snrnp48	93	45.723	ENSMOCG00000015555	Snrnp48	84	48.592	Microtus_ochrogaster
ENSXMAG00000013595	snrnp48	56	79.688	ENSMMOG00000003072	-	61	79.688	Mola_mola
ENSXMAG00000013595	snrnp48	83	47.119	ENSMODG00000009996	SNRNP48	77	47.368	Monodelphis_domestica
ENSXMAG00000013595	snrnp48	96	71.341	ENSMALG00000005725	snrnp48	95	74.618	Monopterus_albus
ENSXMAG00000013595	snrnp48	93	44.838	MGP_CAROLIEiJ_G0018441	Snrnp48	84	47.535	Mus_caroli
ENSXMAG00000013595	snrnp48	93	45.133	MGP_PahariEiJ_G0019509	Snrnp48	84	47.887	Mus_pahari
ENSXMAG00000013595	snrnp48	93	44.838	MGP_SPRETEiJ_G0019321	Snrnp48	84	47.535	Mus_spretus
ENSXMAG00000013595	snrnp48	93	45.723	ENSNGAG00000004849	Snrnp48	82	50.538	Nannospalax_galili
ENSXMAG00000013595	snrnp48	94	76.012	ENSNBRG00000012127	snrnp48	94	75.610	Neolamprologus_brichardi
ENSXMAG00000013595	snrnp48	81	45.317	ENSNLEG00000011667	SNRNP48	82	50.179	Nomascus_leucogenys
ENSXMAG00000013595	snrnp48	86	45.981	ENSOPRG00000015471	SNRNP48	77	52.419	Ochotona_princeps
ENSXMAG00000013595	snrnp48	94	76.636	ENSONIG00000001520	snrnp48	94	76.074	Oreochromis_niloticus
ENSXMAG00000013595	snrnp48	52	38.806	ENSOANG00000019888	-	99	38.756	Ornithorhynchus_anatinus
ENSXMAG00000013595	snrnp48	79	47.464	ENSOCUG00000005168	SNRNP48	93	47.887	Oryctolagus_cuniculus
ENSXMAG00000013595	snrnp48	87	75.667	ENSORLG00000015654	snrnp48	94	74.695	Oryzias_latipes
ENSXMAG00000013595	snrnp48	87	74.000	ENSORLG00020015976	snrnp48	80	74.085	Oryzias_latipes_hni
ENSXMAG00000013595	snrnp48	87	73.667	ENSORLG00015022379	snrnp48	80	73.780	Oryzias_latipes_hsok
ENSXMAG00000013595	snrnp48	94	74.923	ENSOMEG00000022007	snrnp48	94	74.695	Oryzias_melastigma
ENSXMAG00000013595	snrnp48	76	49.286	ENSOGAG00000005275	SNRNP48	84	49.286	Otolemur_garnettii
ENSXMAG00000013595	snrnp48	83	45.333	ENSOARG00000017319	SNRNP48	73	53.052	Ovis_aries
ENSXMAG00000013595	snrnp48	81	45.317	ENSPPAG00000032873	SNRNP48	82	50.179	Pan_paniscus
ENSXMAG00000013595	snrnp48	81	43.865	ENSPPRG00000004283	SNRNP48	82	48.746	Panthera_pardus
ENSXMAG00000013595	snrnp48	71	44.755	ENSPTIG00000013502	SNRNP48	81	50.855	Panthera_tigris_altaica
ENSXMAG00000013595	snrnp48	81	45.317	ENSPTRG00000017703	SNRNP48	82	50.179	Pan_troglodytes
ENSXMAG00000013595	snrnp48	81	45.317	ENSPANG00000000771	SNRNP48	82	50.179	Papio_anubis
ENSXMAG00000013595	snrnp48	90	55.848	ENSPKIG00000013703	snrnp48	56	63.774	Paramormyrops_kingsleyae
ENSXMAG00000013595	snrnp48	77	49.462	ENSPSIG00000002213	SNRNP48	64	57.005	Pelodiscus_sinensis
ENSXMAG00000013595	snrnp48	76	66.415	ENSPMGG00000008120	snrnp48	94	66.415	Periophthalmus_magnuspinnatus
ENSXMAG00000013595	snrnp48	93	45.858	ENSPEMG00000008872	Snrnp48	84	48.944	Peromyscus_maniculatus_bairdii
ENSXMAG00000013595	snrnp48	95	96.012	ENSPFOG00000003578	snrnp48	95	96.012	Poecilia_formosa
ENSXMAG00000013595	snrnp48	69	95.763	ENSPLAG00000002290	snrnp48	82	95.763	Poecilia_latipinna
ENSXMAG00000013595	snrnp48	100	96.784	ENSPMEG00000018033	snrnp48	100	96.784	Poecilia_mexicana
ENSXMAG00000013595	snrnp48	95	95.092	ENSPREG00000018541	snrnp48	95	95.092	Poecilia_reticulata
ENSXMAG00000013595	snrnp48	81	45.317	ENSPPYG00000016209	SNRNP48	82	50.179	Pongo_abelii
ENSXMAG00000013595	snrnp48	70	38.956	ENSPCAG00000011991	SNRNP48	97	39.464	Procavia_capensis
ENSXMAG00000013595	snrnp48	83	43.030	ENSPVAG00000002854	SNRNP48	83	47.350	Pteropus_vampyrus
ENSXMAG00000013595	snrnp48	92	75.949	ENSPNYG00000015399	snrnp48	89	76.978	Pundamilia_nyererei
ENSXMAG00000013595	snrnp48	93	45.266	ENSRNOG00000013756	Snrnp48	84	47.887	Rattus_norvegicus
ENSXMAG00000013595	snrnp48	76	50.179	ENSRBIG00000043856	SNRNP48	88	50.179	Rhinopithecus_bieti
ENSXMAG00000013595	snrnp48	81	45.317	ENSRROG00000043229	SNRNP48	82	50.179	Rhinopithecus_roxellana
ENSXMAG00000013595	snrnp48	81	45.619	ENSSBOG00000019486	SNRNP48	82	50.538	Saimiri_boliviensis_boliviensis
ENSXMAG00000013595	snrnp48	81	47.973	ENSSHAG00000014483	SNRNP48	80	48.763	Sarcophilus_harrisii
ENSXMAG00000013595	snrnp48	73	62.353	ENSSFOG00015006610	snrnp48	67	60.000	Scleropages_formosus
ENSXMAG00000013595	snrnp48	95	74.006	ENSSDUG00000014953	snrnp48	95	74.006	Seriola_dumerili
ENSXMAG00000013595	snrnp48	95	74.085	ENSSLDG00000005989	snrnp48	95	74.085	Seriola_lalandi_dorsalis
ENSXMAG00000013595	snrnp48	75	51.119	ENSSPUG00000006257	SNRNP48	60	54.930	Sphenodon_punctatus
ENSXMAG00000013595	snrnp48	96	74.924	ENSSPAG00000006454	snrnp48	95	75.460	Stegastes_partitus
ENSXMAG00000013595	snrnp48	80	50.000	ENSTGUG00000007575	SNRNP48	68	57.209	Taeniopygia_guttata
ENSXMAG00000013595	snrnp48	74	71.875	ENSTRUG00000007031	snrnp48	77	72.137	Takifugu_rubripes
ENSXMAG00000013595	snrnp48	98	65.476	ENSTNIG00000012977	-	82	69.231	Tetraodon_nigroviridis
ENSXMAG00000013595	snrnp48	73	49.219	ENSTBEG00000015620	SNRNP48	75	49.219	Tupaia_belangeri
ENSXMAG00000013595	snrnp48	85	44.479	ENSTTRG00000016715	SNRNP48	81	48.188	Tursiops_truncatus
ENSXMAG00000013595	snrnp48	93	44.144	ENSUAMG00000003690	SNRNP48	81	48.364	Ursus_americanus
ENSXMAG00000013595	snrnp48	60	52.857	ENSVPAG00000003557	SNRNP48	71	52.885	Vicugna_pacos
ENSXMAG00000013595	snrnp48	92	44.444	ENSVVUG00000004996	SNRNP48	81	48.188	Vulpes_vulpes
ENSXMAG00000013595	snrnp48	83	48.097	ENSXETG00000020447	snrnp48	77	49.810	Xenopus_tropicalis
ENSXMAG00000013595	snrnp48	95	90.491	ENSXCOG00000004478	snrnp48	95	90.491	Xiphophorus_couchianus