EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013796 (Gene tree)
Gene ID: 102226018
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 14917 bases
Position: chr10:3804678-3819594
Accession: 102226018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000039694	eIF-3c_N	PF05470.12	4e-250	1	1
ENSXMAP00000013829	eIF-3c_N	PF05470.12	4.6e-250	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000021889	-	5721	-	ENSXMAP00000039694	916 (aa)	-	-
ENSXMAT00000013847	-	5763	XM_014473232	ENSXMAP00000013829	930 (aa)	XP_014328718	M4AH85

Gene Model

Click here to download ENSXMAG00000013796's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013796	eif3c	100	75.054	ENSG00000184110	EIF3C	100	84.810	Homo_sapiens
ENSXMAG00000013796	eif3c	100	74.973	ENSG00000205609	EIF3CL	100	75.512	Homo_sapiens
ENSXMAG00000013796	eif3c	100	91.221	ENSAPOG00000024092	eif3c	100	91.667	Acanthochromis_polyacanthus
ENSXMAG00000013796	eif3c	100	75.270	ENSAMEG00000015454	-	100	75.810	Ailuropoda_melanoleuca
ENSXMAG00000013796	eif3c	100	85.808	ENSACIG00000015082	eif3c	100	85.044	Amphilophus_citrinellus
ENSXMAG00000013796	eif3c	100	91.649	ENSAOCG00000021466	eif3c	100	92.308	Amphiprion_ocellaris
ENSXMAG00000013796	eif3c	100	91.649	ENSAPEG00000010521	eif3c	100	92.308	Amphiprion_percula
ENSXMAG00000013796	eif3c	100	91.123	ENSATEG00000019001	eif3c	100	91.782	Anabas_testudineus
ENSXMAG00000013796	eif3c	100	78.355	ENSACAG00000005937	-	100	78.139	Anolis_carolinensis
ENSXMAG00000013796	eif3c	100	74.946	ENSANAG00000020640	-	100	75.594	Aotus_nancymaae
ENSXMAG00000013796	eif3c	84	93.750	ENSACLG00000009322	eif3c	92	92.382	Astatotilapia_calliptera
ENSXMAG00000013796	eif3c	100	83.188	ENSACLG00000009347	eif3c	100	83.243	Astatotilapia_calliptera
ENSXMAG00000013796	eif3c	100	85.213	ENSAMXG00000020949	eif3c	100	85.638	Astyanax_mexicanus
ENSXMAG00000013796	eif3c	100	75.459	ENSBTAG00000006543	EIF3CL	100	75.836	Bos_taurus
ENSXMAG00000013796	eif3c	99	42.719	WBGene00001226	eif-3.C	97	42.489	Caenorhabditis_elegans
ENSXMAG00000013796	eif3c	100	74.946	ENSCJAG00000006341	-	100	77.657	Callithrix_jacchus
ENSXMAG00000013796	eif3c	100	75.270	ENSCAFG00000017143	-	100	75.918	Canis_familiaris
ENSXMAG00000013796	eif3c	100	75.270	ENSCAFG00020017587	-	100	75.918	Canis_lupus_dingo
ENSXMAG00000013796	eif3c	100	75.784	ENSCHIG00000024795	-	100	76.052	Capra_hircus
ENSXMAG00000013796	eif3c	100	74.838	ENSTSYG00000003486	-	100	75.378	Carlito_syrichta
ENSXMAG00000013796	eif3c	96	68.238	ENSCAPG00000015887	-	99	68.687	Cavia_aperea
ENSXMAG00000013796	eif3c	100	74.946	ENSCPOG00000007533	-	100	75.594	Cavia_porcellus
ENSXMAG00000013796	eif3c	100	74.595	ENSCCAG00000034928	-	100	75.351	Cebus_capucinus
ENSXMAG00000013796	eif3c	99	63.417	ENSCCAG00000029099	-	99	62.798	Cebus_capucinus
ENSXMAG00000013796	eif3c	100	70.842	ENSCCAG00000027724	-	100	70.766	Cebus_capucinus
ENSXMAG00000013796	eif3c	100	75.054	ENSCATG00000032673	-	100	75.702	Cercocebus_atys
ENSXMAG00000013796	eif3c	100	75.189	ENSCLAG00000011094	-	100	75.568	Chinchilla_lanigera
ENSXMAG00000013796	eif3c	100	75.054	ENSCSAG00000006297	-	100	75.702	Chlorocebus_sabaeus
ENSXMAG00000013796	eif3c	54	68.726	ENSCHOG00000003120	-	88	68.726	Choloepus_hoffmanni
ENSXMAG00000013796	eif3c	68	87.580	ENSCPBG00000012407	-	95	72.812	Chrysemys_picta_bellii
ENSXMAG00000013796	eif3c	77	56.303	ENSCSAVG00000006744	-	92	56.303	Ciona_savignyi
ENSXMAG00000013796	eif3c	100	75.054	ENSCANG00000033626	-	100	75.702	Colobus_angolensis_palliatus
ENSXMAG00000013796	eif3c	100	74.270	ENSCGRG00001015265	EIF3C	100	75.027	Cricetulus_griseus_chok1gshd
ENSXMAG00000013796	eif3c	100	89.400	ENSCSEG00000017770	eif3c	100	89.733	Cynoglossus_semilaevis
ENSXMAG00000013796	eif3c	100	93.998	ENSCVAG00000005402	eif3c	100	94.855	Cyprinodon_variegatus
ENSXMAG00000013796	eif3c	100	86.461	ENSDARG00000016443	eif3c	100	87.007	Danio_rerio
ENSXMAG00000013796	eif3c	100	75.054	ENSDNOG00000031497	-	100	75.594	Dasypus_novemcinctus
ENSXMAG00000013796	eif3c	100	74.622	ENSDORG00000016471	Eif3c	100	75.270	Dipodomys_ordii
ENSXMAG00000013796	eif3c	66	58.043	FBgn0034258	eIF3c	97	51.732	Drosophila_melanogaster
ENSXMAG00000013796	eif3c	92	84.475	ENSETEG00000013527	-	92	84.475	Echinops_telfairi
ENSXMAG00000013796	eif3c	99	63.326	ENSEBUG00000001629	eif3c	99	62.990	Eptatretus_burgeri
ENSXMAG00000013796	eif3c	100	75.270	ENSECAG00000008746	-	100	75.676	Equus_caballus
ENSXMAG00000013796	eif3c	87	75.155	ENSEEUG00000006148	-	99	75.896	Erinaceus_europaeus
ENSXMAG00000013796	eif3c	62	56.007	ENSEEUG00000000726	-	64	54.855	Erinaceus_europaeus
ENSXMAG00000013796	eif3c	100	84.657	ENSELUG00000022257	eif3c	93	95.031	Esox_lucius
ENSXMAG00000013796	eif3c	100	75.378	ENSFCAG00000015782	-	100	75.594	Felis_catus
ENSXMAG00000013796	eif3c	100	75.054	ENSFDAG00000003588	-	100	75.594	Fukomys_damarensis
ENSXMAG00000013796	eif3c	100	95.829	ENSFHEG00000014154	EIF3C	100	95.829	Fundulus_heteroclitus
ENSXMAG00000013796	eif3c	97	86.786	ENSGMOG00000016885	eif3c	100	87.248	Gadus_morhua
ENSXMAG00000013796	eif3c	96	87.698	ENSGACG00000007652	eif3c	100	88.792	Gasterosteus_aculeatus
ENSXMAG00000013796	eif3c	92	76.146	ENSGAGG00000006666	-	100	76.678	Gopherus_agassizii
ENSXMAG00000013796	eif3c	99	73.838	ENSGGOG00000026919	EIF3C	99	76.319	Gorilla_gorilla
ENSXMAG00000013796	eif3c	63	74.054	ENSGGOG00000022677	-	99	78.764	Gorilla_gorilla
ENSXMAG00000013796	eif3c	100	74.946	ENSHGLG00000011445	EIF3C	100	75.702	Heterocephalus_glaber_female
ENSXMAG00000013796	eif3c	100	74.946	ENSHGLG00100000217	EIF3C	100	75.702	Heterocephalus_glaber_male
ENSXMAG00000013796	eif3c	100	87.460	ENSHCOG00000019694	eif3c	100	88.568	Hippocampus_comes
ENSXMAG00000013796	eif3c	99	84.345	ENSIPUG00000016878	eif3c	99	85.638	Ictalurus_punctatus
ENSXMAG00000013796	eif3c	100	75.162	ENSSTOG00000021278	-	100	75.568	Ictidomys_tridecemlineatus
ENSXMAG00000013796	eif3c	100	73.866	ENSJJAG00000012722	Eif3c	100	74.703	Jaculus_jaculus
ENSXMAG00000013796	eif3c	99	94.053	ENSKMAG00000021662	eif3c	100	92.698	Kryptolebias_marmoratus
ENSXMAG00000013796	eif3c	100	87.996	ENSLBEG00000023370	eif3c	100	89.615	Labrus_bergylta
ENSXMAG00000013796	eif3c	98	78.587	ENSLACG00000000770	eif3c	99	81.148	Latimeria_chalumnae
ENSXMAG00000013796	eif3c	100	74.730	ENSLAFG00000027426	-	100	75.270	Loxodonta_africana
ENSXMAG00000013796	eif3c	100	75.054	ENSMFAG00000041930	-	100	75.702	Macaca_fascicularis
ENSXMAG00000013796	eif3c	100	75.054	ENSMMUG00000011798	-	100	75.702	Macaca_mulatta
ENSXMAG00000013796	eif3c	100	75.054	ENSMNEG00000023915	-	100	75.702	Macaca_nemestrina
ENSXMAG00000013796	eif3c	100	75.054	ENSMLEG00000027529	-	100	75.702	Mandrillus_leucophaeus
ENSXMAG00000013796	eif3c	100	91.551	ENSMAMG00000012512	eif3c	100	91.551	Mastacembelus_armatus
ENSXMAG00000013796	eif3c	92	96.875	ENSMZEG00005013699	eif3c	95	96.875	Maylandia_zebra
ENSXMAG00000013796	eif3c	84	93.750	ENSMZEG00005013685	eif3c	92	92.220	Maylandia_zebra
ENSXMAG00000013796	eif3c	100	74.054	ENSMAUG00000010621	Eif3c	100	75.135	Mesocricetus_auratus
ENSXMAG00000013796	eif3c	100	75.378	ENSMICG00000036748	-	100	75.810	Microcebus_murinus
ENSXMAG00000013796	eif3c	100	73.405	ENSMOCG00000004204	Eif3c	100	73.405	Microtus_ochrogaster
ENSXMAG00000013796	eif3c	100	83.843	ENSMMOG00000001572	eif3c	100	84.061	Mola_mola
ENSXMAG00000013796	eif3c	100	75.081	ENSMODG00000015579	-	100	76.190	Monodelphis_domestica
ENSXMAG00000013796	eif3c	84	95.567	ENSMALG00000008907	eif3c	99	90.964	Monopterus_albus
ENSXMAG00000013796	eif3c	100	74.162	MGP_CAROLIEiJ_G0030451	Eif3c	100	74.486	Mus_caroli
ENSXMAG00000013796	eif3c	100	74.162	ENSMUSG00000030738	Eif3c	100	74.486	Mus_musculus
ENSXMAG00000013796	eif3c	100	73.730	MGP_PahariEiJ_G0013661	Eif3c	100	74.162	Mus_pahari
ENSXMAG00000013796	eif3c	100	74.162	MGP_SPRETEiJ_G0031565	Eif3c	100	74.486	Mus_spretus
ENSXMAG00000013796	eif3c	97	75.588	ENSMPUG00000012732	-	99	76.319	Mustela_putorius_furo
ENSXMAG00000013796	eif3c	100	75.054	ENSMLUG00000015558	-	100	75.378	Myotis_lucifugus
ENSXMAG00000013796	eif3c	100	74.622	ENSNGAG00000007177	-	100	75.162	Nannospalax_galili
ENSXMAG00000013796	eif3c	73	64.332	ENSNGAG00000010901	-	98	61.818	Nannospalax_galili
ENSXMAG00000013796	eif3c	91	76.404	ENSNLEG00000001425	-	96	77.844	Nomascus_leucogenys
ENSXMAG00000013796	eif3c	100	63.814	ENSMEUG00000009939	-	99	63.402	Notamacropus_eugenii
ENSXMAG00000013796	eif3c	88	60.000	ENSMEUG00000005317	-	95	61.468	Notamacropus_eugenii
ENSXMAG00000013796	eif3c	100	74.298	ENSOPRG00000000931	-	100	75.054	Ochotona_princeps
ENSXMAG00000013796	eif3c	100	74.946	ENSODEG00000013508	-	100	75.676	Octodon_degus
ENSXMAG00000013796	eif3c	67	71.795	ENSONIG00000011434	eif3c	100	72.459	Oreochromis_niloticus
ENSXMAG00000013796	eif3c	100	71.383	ENSOANG00000011410	-	100	72.524	Ornithorhynchus_anatinus
ENSXMAG00000013796	eif3c	100	75.054	ENSOCUG00000022489	-	100	75.702	Oryctolagus_cuniculus
ENSXMAG00000013796	eif3c	99	87.885	ENSORLG00000006318	eif3c	94	95.652	Oryzias_latipes
ENSXMAG00000013796	eif3c	99	87.885	ENSORLG00020015713	eif3c	100	87.996	Oryzias_latipes_hni
ENSXMAG00000013796	eif3c	99	87.996	ENSORLG00015013772	eif3c	100	88.983	Oryzias_latipes_hsok
ENSXMAG00000013796	eif3c	100	89.079	ENSOMEG00000020450	eif3c	100	89.840	Oryzias_melastigma
ENSXMAG00000013796	eif3c	100	74.730	ENSOGAG00000012737	-	100	75.270	Otolemur_garnettii
ENSXMAG00000013796	eif3c	100	75.784	ENSOARG00000002892	-	100	76.052	Ovis_aries
ENSXMAG00000013796	eif3c	100	75.378	ENSPPRG00000012336	-	100	75.594	Panthera_pardus
ENSXMAG00000013796	eif3c	100	75.378	ENSPTIG00000011712	-	100	75.594	Panthera_tigris_altaica
ENSXMAG00000013796	eif3c	100	75.054	ENSPANG00000021151	-	100	75.702	Papio_anubis
ENSXMAG00000013796	eif3c	100	86.952	ENSPKIG00000002049	eif3c	100	86.524	Paramormyrops_kingsleyae
ENSXMAG00000013796	eif3c	89	97.171	ENSPMGG00000005409	eif3c	100	84.170	Periophthalmus_magnuspinnatus
ENSXMAG00000013796	eif3c	100	74.378	ENSPEMG00000010899	Eif3c	100	74.703	Peromyscus_maniculatus_bairdii
ENSXMAG00000013796	eif3c	100	74.757	ENSPCIG00000025206	-	100	76.190	Phascolarctos_cinereus
ENSXMAG00000013796	eif3c	100	98.280	ENSPFOG00000004476	eif3c	100	98.280	Poecilia_formosa
ENSXMAG00000013796	eif3c	93	97.793	ENSPLAG00000017480	eif3c	100	97.793	Poecilia_latipinna
ENSXMAG00000013796	eif3c	100	98.065	ENSPMEG00000019512	eif3c	100	98.065	Poecilia_mexicana
ENSXMAG00000013796	eif3c	100	85.153	ENSPREG00000023139	eif3c	100	86.566	Poecilia_reticulata
ENSXMAG00000013796	eif3c	100	73.110	ENSPPYG00000007227	-	100	73.866	Pongo_abelii
ENSXMAG00000013796	eif3c	66	83.389	ENSPCAG00000012710	-	100	83.389	Procavia_capensis
ENSXMAG00000013796	eif3c	100	75.270	ENSPCOG00000019289	-	100	75.810	Propithecus_coquereli
ENSXMAG00000013796	eif3c	100	75.270	ENSPVAG00000005804	-	100	75.702	Pteropus_vampyrus
ENSXMAG00000013796	eif3c	54	93.750	ENSPNYG00000016530	eif3c	84	91.477	Pundamilia_nyererei
ENSXMAG00000013796	eif3c	100	86.766	ENSPNAG00000024040	eif3c	94	93.701	Pygocentrus_nattereri
ENSXMAG00000013796	eif3c	100	73.838	ENSRNOG00000018761	Eif3c	100	74.270	Rattus_norvegicus
ENSXMAG00000013796	eif3c	98	74.533	ENSRBIG00000044009	-	98	74.421	Rhinopithecus_bieti
ENSXMAG00000013796	eif3c	100	75.054	ENSRROG00000043626	-	100	75.702	Rhinopithecus_roxellana
ENSXMAG00000013796	eif3c	73	30.686	YMR309C	-	81	30.686	Saccharomyces_cerevisiae
ENSXMAG00000013796	eif3c	100	74.730	ENSSBOG00000032155	-	100	75.378	Saimiri_boliviensis_boliviensis
ENSXMAG00000013796	eif3c	97	75.335	ENSSHAG00000011808	-	99	77.104	Sarcophilus_harrisii
ENSXMAG00000013796	eif3c	100	86.004	ENSSFOG00015021823	eif3c	100	85.791	Scleropages_formosus
ENSXMAG00000013796	eif3c	97	90.034	ENSSMAG00000016638	eif3c	97	90.929	Scophthalmus_maximus
ENSXMAG00000013796	eif3c	100	91.640	ENSSDUG00000023117	eif3c	100	91.658	Seriola_dumerili
ENSXMAG00000013796	eif3c	100	91.426	ENSSLDG00000009706	eif3c	96	95.860	Seriola_lalandi_dorsalis
ENSXMAG00000013796	eif3c	100	76.082	ENSSPUG00000016470	-	100	76.515	Sphenodon_punctatus
ENSXMAG00000013796	eif3c	100	91.730	ENSSPAG00000000426	eif3c	100	92.617	Stegastes_partitus
ENSXMAG00000013796	eif3c	100	74.622	ENSSSCG00000034927	-	100	75.486	Sus_scrofa
ENSXMAG00000013796	eif3c	99	88.698	ENSTRUG00000008951	eif3c	99	90.000	Takifugu_rubripes
ENSXMAG00000013796	eif3c	100	88.453	ENSTNIG00000015210	eif3c	100	88.185	Tetraodon_nigroviridis
ENSXMAG00000013796	eif3c	100	75.162	ENSTTRG00000005880	-	100	75.594	Tursiops_truncatus
ENSXMAG00000013796	eif3c	67	83.824	ENSUAMG00000001127	-	91	91.720	Ursus_americanus
ENSXMAG00000013796	eif3c	100	75.270	ENSUMAG00000010927	-	100	75.810	Ursus_maritimus
ENSXMAG00000013796	eif3c	100	74.919	ENSVVUG00000025970	-	100	74.514	Vulpes_vulpes
ENSXMAG00000013796	eif3c	100	77.112	ENSXETG00000002941	eif3c	100	77.754	Xenopus_tropicalis