EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013804 (Gene tree)
Gene ID: 102238240
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing protein 36 homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 8960 bases
Position: chr5:4890833-4899792
Accession: 102238240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013835	RRP36	PF06102.12	2.8e-44	1	1
ENSXMAP00000021023	RRP36	PF06102.12	7.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013852	-	5571	-	ENSXMAP00000013835	481 (aa)	-	M4AH91
ENSXMAT00000036331	-	6134	XM_023333041	ENSXMAP00000021023	382 (aa)	XP_023188809	-

Gene Model

Click here to download ENSXMAG00000013804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013804's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013804	rrp36	50	44.388	ENSG00000124541	RRP36	81	52.607	Homo_sapiens
ENSXMAG00000013804	rrp36	57	60.507	ENSAPOG00000022015	rrp36	85	66.383	Acanthochromis_polyacanthus
ENSXMAG00000013804	rrp36	52	66.000	ENSACIG00000020578	-	70	65.297	Amphilophus_citrinellus
ENSXMAG00000013804	rrp36	50	43.655	ENSCJAG00000004943	RRP36	91	49.138	Callithrix_jacchus
ENSXMAG00000013804	rrp36	50	44.615	ENSTSYG00000037176	RRP36	89	48.684	Carlito_syrichta
ENSXMAG00000013804	rrp36	69	39.630	ENSCPBG00000003555	RRP36	59	54.338	Chrysemys_picta_bellii
ENSXMAG00000013804	rrp36	51	58.065	ENSDARG00000032516	rrp36	72	59.565	Danio_rerio
ENSXMAG00000013804	rrp36	50	45.128	ENSEASG00005003169	RRP36	92	51.659	Equus_asinus_asinus
ENSXMAG00000013804	rrp36	50	45.128	ENSECAG00000040238	RRP36	92	51.659	Equus_caballus
ENSXMAG00000013804	rrp36	62	53.846	ENSELUG00000016840	rrp36	63	67.411	Esox_lucius
ENSXMAG00000013804	rrp36	50	44.615	ENSFCAG00000043818	RRP36	87	50.228	Felis_catus
ENSXMAG00000013804	rrp36	88	67.062	ENSGAFG00000017817	rrp36	66	95.279	Gambusia_affinis
ENSXMAG00000013804	rrp36	52	67.717	ENSGACG00000019603	RRP36	71	69.658	Gasterosteus_aculeatus
ENSXMAG00000013804	rrp36	59	63.251	ENSHBUG00000008974	RRP36	71	69.264	Haplochromis_burtoni
ENSXMAG00000013804	rrp36	56	52.612	ENSIPUG00000016548	rrp36	72	58.525	Ictalurus_punctatus
ENSXMAG00000013804	rrp36	52	66.791	ENSKMAG00000006968	rrp36	65	76.000	Kryptolebias_marmoratus
ENSXMAG00000013804	rrp36	74	49.466	ENSLBEG00000017728	-	70	60.536	Labrus_bergylta
ENSXMAG00000013804	rrp36	53	52.593	ENSLACG00000001888	rrp36	69	57.078	Latimeria_chalumnae
ENSXMAG00000013804	rrp36	70	45.172	ENSLOCG00000015862	RRP36	65	60.515	Lepisosteus_oculatus
ENSXMAG00000013804	rrp36	59	63.958	ENSMZEG00005015204	RRP36	98	49.870	Maylandia_zebra
ENSXMAG00000013804	rrp36	51	62.755	ENSMMOG00000018637	-	67	67.411	Mola_mola
ENSXMAG00000013804	rrp36	50	42.784	ENSMUSG00000023971	Rrp36	96	47.248	Mus_musculus
ENSXMAG00000013804	rrp36	50	42.268	MGP_SPRETEiJ_G0022592	Rrp36	86	47.867	Mus_spretus
ENSXMAG00000013804	rrp36	50	45.128	ENSPPRG00000014610	RRP36	86	50.926	Panthera_pardus
ENSXMAG00000013804	rrp36	50	45.128	ENSPTIG00000010853	RRP36	86	50.926	Panthera_tigris_altaica
ENSXMAG00000013804	rrp36	50	44.388	ENSPTRG00000018184	RRP36	81	52.133	Pan_troglodytes
ENSXMAG00000013804	rrp36	62	54.019	ENSPKIG00000004303	rrp36	65	62.946	Paramormyrops_kingsleyae
ENSXMAG00000013804	rrp36	88	67.656	ENSPMEG00000024099	rrp36	66	91.102	Poecilia_mexicana
ENSXMAG00000013804	rrp36	88	68.546	ENSPREG00000022787	rrp36	67	90.678	Poecilia_reticulata
ENSXMAG00000013804	rrp36	50	44.828	ENSPPYG00000016628	RRP36	81	52.133	Pongo_abelii
ENSXMAG00000013804	rrp36	59	63.958	ENSPNYG00000018030	RRP36	71	70.130	Pundamilia_nyererei
ENSXMAG00000013804	rrp36	63	51.029	ENSSFOG00015023058	rrp36	66	61.818	Scleropages_formosus
ENSXMAG00000013804	rrp36	50	33.333	ENSSSCG00000037862	-	88	38.119	Sus_scrofa
ENSXMAG00000013804	rrp36	50	42.857	ENSSSCG00000001656	RRP36	86	48.661	Sus_scrofa