EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013823 (Gene tree)
Gene ID: 102226647
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 11700 bases
Position: chr5:26024294-26035993
Accession: 102226647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000013858	TRM	PF02005.16	3.7e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000013875	-	1728	XM_014469294	ENSXMAP00000013858	575 (aa)	XP_014324780	M4AHB4

Gene Model

Click here to download ENSXMAG00000013823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013823	trmt1	98	68.403	ENSG00000104907	TRMT1	100	76.042	Homo_sapiens
ENSXMAG00000013823	trmt1	98	67.703	ENSAMEG00000012598	TRMT1	86	67.301	Ailuropoda_melanoleuca
ENSXMAG00000013823	trmt1	99	81.359	ENSACIG00000018680	trmt1	89	81.359	Amphilophus_citrinellus
ENSXMAG00000013823	trmt1	99	88.307	ENSAOCG00000006781	trmt1	87	88.307	Amphiprion_ocellaris
ENSXMAG00000013823	trmt1	99	88.482	ENSAPEG00000007712	trmt1	87	88.482	Amphiprion_percula
ENSXMAG00000013823	trmt1	99	89.180	ENSATEG00000001872	trmt1	86	89.180	Anabas_testudineus
ENSXMAG00000013823	trmt1	99	67.708	ENSACAG00000003825	TRMT1	93	67.535	Anolis_carolinensis
ENSXMAG00000013823	trmt1	98	66.725	ENSANAG00000023016	TRMT1	92	66.202	Aotus_nancymaae
ENSXMAG00000013823	trmt1	99	85.689	ENSACLG00000010073	trmt1	94	85.340	Astatotilapia_calliptera
ENSXMAG00000013823	trmt1	99	80.138	ENSAMXG00000012026	trmt1	87	80.138	Astyanax_mexicanus
ENSXMAG00000013823	trmt1	97	68.007	ENSBTAG00000019325	TRMT1	81	67.776	Bos_taurus
ENSXMAG00000013823	trmt1	88	40.812	WBGene00006613	trm-1	93	40.426	Caenorhabditis_elegans
ENSXMAG00000013823	trmt1	98	65.571	ENSCJAG00000004566	TRMT1	88	65.052	Callithrix_jacchus
ENSXMAG00000013823	trmt1	98	68.221	ENSCAFG00000017070	TRMT1	90	67.764	Canis_familiaris
ENSXMAG00000013823	trmt1	98	67.993	ENSCAFG00020005397	TRMT1	89	67.478	Canis_lupus_dingo
ENSXMAG00000013823	trmt1	97	67.657	ENSCHIG00000013569	TRMT1	86	67.657	Capra_hircus
ENSXMAG00000013823	trmt1	98	65.685	ENSTSYG00000003207	TRMT1	87	65.391	Carlito_syrichta
ENSXMAG00000013823	trmt1	91	63.465	ENSCAPG00000003355	TRMT1	94	63.277	Cavia_aperea
ENSXMAG00000013823	trmt1	97	66.841	ENSCPOG00000011754	TRMT1	87	66.608	Cavia_porcellus
ENSXMAG00000013823	trmt1	98	65.157	ENSCCAG00000022263	TRMT1	92	64.634	Cebus_capucinus
ENSXMAG00000013823	trmt1	87	58.099	ENSCATG00000038220	-	90	57.451	Cercocebus_atys
ENSXMAG00000013823	trmt1	98	68.000	ENSCATG00000039850	TRMT1	87	68.000	Cercocebus_atys
ENSXMAG00000013823	trmt1	97	68.126	ENSCLAG00000015295	TRMT1	89	65.088	Chinchilla_lanigera
ENSXMAG00000013823	trmt1	81	70.737	ENSCSAG00000006500	TRMT1	89	70.737	Chlorocebus_sabaeus
ENSXMAG00000013823	trmt1	98	70.442	ENSCPBG00000023866	TRMT1	85	70.442	Chrysemys_picta_bellii
ENSXMAG00000013823	trmt1	93	49.189	ENSCING00000002884	-	97	48.708	Ciona_intestinalis
ENSXMAG00000013823	trmt1	93	51.111	ENSCSAVG00000010927	-	100	49.177	Ciona_savignyi
ENSXMAG00000013823	trmt1	98	53.646	ENSCANG00000040631	TRMT1	87	53.646	Colobus_angolensis_palliatus
ENSXMAG00000013823	trmt1	98	52.880	ENSCANG00000031650	-	88	52.531	Colobus_angolensis_palliatus
ENSXMAG00000013823	trmt1	97	67.663	ENSCGRG00001022594	Trmt1	87	67.838	Cricetulus_griseus_chok1gshd
ENSXMAG00000013823	trmt1	97	67.663	ENSCGRG00000017732	Trmt1	86	67.838	Cricetulus_griseus_crigri
ENSXMAG00000013823	trmt1	99	85.864	ENSCSEG00000001643	trmt1	86	85.689	Cynoglossus_semilaevis
ENSXMAG00000013823	trmt1	99	91.623	ENSCVAG00000011886	trmt1	87	91.623	Cyprinodon_variegatus
ENSXMAG00000013823	trmt1	99	78.902	ENSDARG00000010978	trmt1	87	77.665	Danio_rerio
ENSXMAG00000013823	trmt1	89	46.578	ENSDNOG00000048240	-	89	46.300	Dasypus_novemcinctus
ENSXMAG00000013823	trmt1	97	65.849	ENSDORG00000014298	Trmt1	86	65.909	Dipodomys_ordii
ENSXMAG00000013823	trmt1	93	46.920	FBgn0032430	CG6388	93	46.377	Drosophila_melanogaster
ENSXMAG00000013823	trmt1	88	51.575	ENSEBUG00000003449	trmt1	75	51.758	Eptatretus_burgeri
ENSXMAG00000013823	trmt1	98	67.530	ENSEASG00005004050	TRMT1	90	67.244	Equus_asinus_asinus
ENSXMAG00000013823	trmt1	98	67.530	ENSECAG00000016149	TRMT1	90	67.244	Equus_caballus
ENSXMAG00000013823	trmt1	68	58.228	ENSEEUG00000014102	-	100	58.228	Erinaceus_europaeus
ENSXMAG00000013823	trmt1	98	77.700	ENSELUG00000021659	trmt1	86	77.700	Esox_lucius
ENSXMAG00000013823	trmt1	98	67.130	ENSFCAG00000000483	TRMT1	87	67.130	Felis_catus
ENSXMAG00000013823	trmt1	97	67.426	ENSFDAG00000007386	TRMT1	86	67.075	Fukomys_damarensis
ENSXMAG00000013823	trmt1	89	92.368	ENSFHEG00000012865	trmt1	85	92.368	Fundulus_heteroclitus
ENSXMAG00000013823	trmt1	97	73.975	ENSGMOG00000006564	trmt1	98	73.975	Gadus_morhua
ENSXMAG00000013823	trmt1	99	97.723	ENSGAFG00000011862	trmt1	90	97.723	Gambusia_affinis
ENSXMAG00000013823	trmt1	97	83.066	ENSGACG00000000227	trmt1	91	83.066	Gasterosteus_aculeatus
ENSXMAG00000013823	trmt1	98	70.723	ENSGAGG00000016432	TRMT1	85	70.547	Gopherus_agassizii
ENSXMAG00000013823	trmt1	98	68.403	ENSGGOG00000014007	TRMT1	87	68.229	Gorilla_gorilla
ENSXMAG00000013823	trmt1	95	77.273	ENSHBUG00000008821	trmt1	92	75.956	Haplochromis_burtoni
ENSXMAG00000013823	trmt1	97	67.483	ENSHGLG00000015972	TRMT1	87	67.250	Heterocephalus_glaber_female
ENSXMAG00000013823	trmt1	97	62.413	ENSHGLG00100018112	TRMT1	87	62.413	Heterocephalus_glaber_male
ENSXMAG00000013823	trmt1	99	80.803	ENSHCOG00000009447	trmt1	89	80.803	Hippocampus_comes
ENSXMAG00000013823	trmt1	98	76.621	ENSIPUG00000002899	trmt1	85	76.451	Ictalurus_punctatus
ENSXMAG00000013823	trmt1	97	67.483	ENSSTOG00000012531	TRMT1	87	67.426	Ictidomys_tridecemlineatus
ENSXMAG00000013823	trmt1	97	67.663	ENSJJAG00000017154	Trmt1	88	66.551	Jaculus_jaculus
ENSXMAG00000013823	trmt1	99	89.529	ENSKMAG00000011809	trmt1	96	85.243	Kryptolebias_marmoratus
ENSXMAG00000013823	trmt1	99	86.387	ENSLBEG00000012703	trmt1	85	86.387	Labrus_bergylta
ENSXMAG00000013823	trmt1	98	62.413	ENSLACG00000014585	TRMT1	94	62.063	Latimeria_chalumnae
ENSXMAG00000013823	trmt1	98	70.922	ENSLOCG00000006479	trmt1	98	70.796	Lepisosteus_oculatus
ENSXMAG00000013823	trmt1	98	68.696	ENSLAFG00000014072	TRMT1	88	68.348	Loxodonta_africana
ENSXMAG00000013823	trmt1	98	68.000	ENSMFAG00000033143	TRMT1	87	68.000	Macaca_fascicularis
ENSXMAG00000013823	trmt1	98	63.525	ENSMMUG00000001167	TRMT1	87	63.525	Macaca_mulatta
ENSXMAG00000013823	trmt1	98	68.000	ENSMNEG00000037867	TRMT1	87	68.000	Macaca_nemestrina
ENSXMAG00000013823	trmt1	98	67.826	ENSMLEG00000016142	TRMT1	87	67.826	Mandrillus_leucophaeus
ENSXMAG00000013823	trmt1	99	89.703	ENSMAMG00000004357	trmt1	86	89.354	Mastacembelus_armatus
ENSXMAG00000013823	trmt1	99	86.213	ENSMZEG00005014510	trmt1	87	85.864	Maylandia_zebra
ENSXMAG00000013823	trmt1	97	67.077	ENSMAUG00000011134	Trmt1	86	66.784	Mesocricetus_auratus
ENSXMAG00000013823	trmt1	98	68.348	ENSMICG00000000793	TRMT1	87	67.826	Microcebus_murinus
ENSXMAG00000013823	trmt1	97	67.075	ENSMOCG00000015895	Trmt1	86	67.426	Microtus_ochrogaster
ENSXMAG00000013823	trmt1	99	85.989	ENSMMOG00000011097	trmt1	93	85.289	Mola_mola
ENSXMAG00000013823	trmt1	99	69.177	ENSMODG00000011619	TRMT1	93	68.403	Monodelphis_domestica
ENSXMAG00000013823	trmt1	97	68.486	MGP_CAROLIEiJ_G0031304	Trmt1	86	68.310	Mus_caroli
ENSXMAG00000013823	trmt1	97	68.607	ENSMUSG00000001909	Trmt1	86	68.486	Mus_musculus
ENSXMAG00000013823	trmt1	97	68.607	MGP_SPRETEiJ_G0032422	Trmt1	86	68.607	Mus_spretus
ENSXMAG00000013823	trmt1	99	68.537	ENSMPUG00000004210	TRMT1	84	68.089	Mustela_putorius_furo
ENSXMAG00000013823	trmt1	98	68.586	ENSMLUG00000012809	TRMT1	85	68.761	Myotis_lucifugus
ENSXMAG00000013823	trmt1	98	67.358	ENSNGAG00000022486	Trmt1	87	67.012	Nannospalax_galili
ENSXMAG00000013823	trmt1	86	90.000	ENSNBRG00000024376	trmt1	86	90.000	Neolamprologus_brichardi
ENSXMAG00000013823	trmt1	77	66.667	ENSNLEG00000013019	-	84	66.330	Nomascus_leucogenys
ENSXMAG00000013823	trmt1	99	68.063	ENSMEUG00000013756	TRMT1	97	68.070	Notamacropus_eugenii
ENSXMAG00000013823	trmt1	80	69.976	ENSOPRG00000009471	-	72	69.976	Ochotona_princeps
ENSXMAG00000013823	trmt1	97	67.776	ENSODEG00000010323	TRMT1	87	67.776	Octodon_degus
ENSXMAG00000013823	trmt1	99	90.052	ENSONIG00000000400	trmt1	91	90.747	Oreochromis_niloticus
ENSXMAG00000013823	trmt1	82	71.042	ENSOCUG00000021934	TRMT1	90	71.042	Oryctolagus_cuniculus
ENSXMAG00000013823	trmt1	99	80.517	ENSORLG00000020074	trmt1	92	80.517	Oryzias_latipes
ENSXMAG00000013823	trmt1	99	85.166	ENSORLG00020007561	trmt1	91	84.495	Oryzias_latipes_hni
ENSXMAG00000013823	trmt1	99	84.991	ENSORLG00015006547	trmt1	88	84.991	Oryzias_latipes_hsok
ENSXMAG00000013823	trmt1	99	85.689	ENSOMEG00000019343	trmt1	88	85.689	Oryzias_melastigma
ENSXMAG00000013823	trmt1	98	67.882	ENSOGAG00000025576	TRMT1	90	67.882	Otolemur_garnettii
ENSXMAG00000013823	trmt1	97	54.878	ENSOARG00000009397	TRMT1	80	55.052	Ovis_aries
ENSXMAG00000013823	trmt1	98	60.590	ENSPPRG00000012117	TRMT1	87	60.801	Panthera_pardus
ENSXMAG00000013823	trmt1	73	69.521	ENSPTIG00000008833	TRMT1	82	68.276	Panthera_tigris_altaica
ENSXMAG00000013823	trmt1	95	50.877	ENSPTRG00000050421	-	89	50.528	Pan_troglodytes
ENSXMAG00000013823	trmt1	98	68.403	ENSPTRG00000010557	TRMT1	87	68.229	Pan_troglodytes
ENSXMAG00000013823	trmt1	98	68.000	ENSPANG00000009247	TRMT1	87	68.000	Papio_anubis
ENSXMAG00000013823	trmt1	76	59.142	ENSPANG00000034058	-	78	58.465	Papio_anubis
ENSXMAG00000013823	trmt1	98	79.433	ENSPKIG00000005309	trmt1	84	79.433	Paramormyrops_kingsleyae
ENSXMAG00000013823	trmt1	98	59.754	ENSPSIG00000008762	TRMT1	80	60.215	Pelodiscus_sinensis
ENSXMAG00000013823	trmt1	98	84.014	ENSPMGG00000019764	trmt1	90	84.014	Periophthalmus_magnuspinnatus
ENSXMAG00000013823	trmt1	97	67.888	ENSPEMG00000016247	Trmt1	86	67.888	Peromyscus_maniculatus_bairdii
ENSXMAG00000013823	trmt1	98	63.233	ENSPMAG00000004329	trmt1	90	63.233	Petromyzon_marinus
ENSXMAG00000013823	trmt1	99	69.002	ENSPCIG00000019273	TRMT1	89	68.229	Phascolarctos_cinereus
ENSXMAG00000013823	trmt1	99	97.548	ENSPFOG00000008527	trmt1	89	97.548	Poecilia_formosa
ENSXMAG00000013823	trmt1	99	95.972	ENSPLAG00000018788	trmt1	88	97.481	Poecilia_latipinna
ENSXMAG00000013823	trmt1	99	97.023	ENSPMEG00000013120	trmt1	89	97.023	Poecilia_mexicana
ENSXMAG00000013823	trmt1	98	95.929	ENSPREG00000000211	trmt1	86	95.929	Poecilia_reticulata
ENSXMAG00000013823	trmt1	98	68.056	ENSPPYG00000009622	TRMT1	87	67.882	Pongo_abelii
ENSXMAG00000013823	trmt1	98	63.937	ENSPCAG00000003698	TRMT1	88	63.937	Procavia_capensis
ENSXMAG00000013823	trmt1	98	67.652	ENSPCOG00000008653	TRMT1	87	67.478	Propithecus_coquereli
ENSXMAG00000013823	trmt1	98	67.938	ENSPVAG00000015076	TRMT1	88	67.764	Pteropus_vampyrus
ENSXMAG00000013823	trmt1	99	84.293	ENSPNYG00000013960	trmt1	94	83.944	Pundamilia_nyererei
ENSXMAG00000013823	trmt1	99	71.848	ENSPNAG00000024859	trmt1	90	71.848	Pygocentrus_nattereri
ENSXMAG00000013823	trmt1	97	67.430	ENSRNOG00000002914	Trmt1	89	67.430	Rattus_norvegicus
ENSXMAG00000013823	trmt1	98	68.118	ENSRBIG00000038324	TRMT1	87	68.118	Rhinopithecus_bieti
ENSXMAG00000013823	trmt1	98	50.780	ENSRBIG00000037505	-	89	51.820	Rhinopithecus_bieti
ENSXMAG00000013823	trmt1	98	50.260	ENSRROG00000031847	-	88	51.300	Rhinopithecus_roxellana
ENSXMAG00000013823	trmt1	98	68.118	ENSRROG00000028599	TRMT1	87	68.118	Rhinopithecus_roxellana
ENSXMAG00000013823	trmt1	88	39.736	YDR120C	-	92	39.548	Saccharomyces_cerevisiae
ENSXMAG00000013823	trmt1	98	65.565	ENSSBOG00000028861	TRMT1	92	64.983	Saimiri_boliviensis_boliviensis
ENSXMAG00000013823	trmt1	98	70.194	ENSSHAG00000014381	TRMT1	94	69.527	Sarcophilus_harrisii
ENSXMAG00000013823	trmt1	99	79.510	ENSSFOG00015004139	trmt1	84	79.510	Scleropages_formosus
ENSXMAG00000013823	trmt1	99	87.197	ENSSMAG00000021136	trmt1	87	87.197	Scophthalmus_maximus
ENSXMAG00000013823	trmt1	99	89.878	ENSSDUG00000012740	trmt1	86	89.703	Seriola_dumerili
ENSXMAG00000013823	trmt1	99	89.529	ENSSLDG00000005971	trmt1	86	89.354	Seriola_lalandi_dorsalis
ENSXMAG00000013823	trmt1	89	65.709	ENSSARG00000005138	TRMT1	92	65.517	Sorex_araneus
ENSXMAG00000013823	trmt1	99	53.793	ENSSPUG00000001084	TRMT1	91	53.584	Sphenodon_punctatus
ENSXMAG00000013823	trmt1	99	87.260	ENSSPAG00000007153	trmt1	95	87.086	Stegastes_partitus
ENSXMAG00000013823	trmt1	99	67.350	ENSSSCG00000013744	TRMT1	92	66.610	Sus_scrofa
ENSXMAG00000013823	trmt1	95	81.216	ENSTRUG00000010700	trmt1	85	81.216	Takifugu_rubripes
ENSXMAG00000013823	trmt1	97	85.740	ENSTNIG00000018808	trmt1	97	85.561	Tetraodon_nigroviridis
ENSXMAG00000013823	trmt1	98	65.391	ENSTTRG00000006379	TRMT1	87	65.217	Tursiops_truncatus
ENSXMAG00000013823	trmt1	98	68.221	ENSUAMG00000022911	TRMT1	94	64.494	Ursus_americanus
ENSXMAG00000013823	trmt1	98	67.876	ENSUMAG00000006027	TRMT1	90	67.474	Ursus_maritimus
ENSXMAG00000013823	trmt1	98	68.631	ENSVVUG00000024177	TRMT1	87	68.174	Vulpes_vulpes
ENSXMAG00000013823	trmt1	80	69.397	ENSXETG00000033863	TRMT1	93	69.181	Xenopus_tropicalis
ENSXMAG00000013823	trmt1	99	99.475	ENSXCOG00000015733	trmt1	89	99.475	Xiphophorus_couchianus