EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013825 (Gene tree)
Gene ID: 102226092
Gene Symbol: prdm5
Alias: un-named hi61|unm hi61
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 52706 bases
Position: chr9:23774648-23827353
Accession: 102226092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	1	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	2	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	3	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	4	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	5	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	6	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	7	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	8	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	9	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	10	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	11	12
ENSXMAP00000041804	zf-C2H2	PF00096.26	3.7e-63	12	12
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	1	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	2	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	3	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	4	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	5	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	6	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	7	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	8	9
ENSXMAP00000013864	zf-C2H2	PF00096.26	1.2e-50	9	9
ENSXMAP00000041804	zf-met	PF12874.7	5.7e-23	1	3
ENSXMAP00000041804	zf-met	PF12874.7	5.7e-23	2	3
ENSXMAP00000041804	zf-met	PF12874.7	5.7e-23	3	3
ENSXMAP00000013864	zf-met	PF12874.7	1.2e-21	1	3
ENSXMAP00000013864	zf-met	PF12874.7	1.2e-21	2	3
ENSXMAP00000013864	zf-met	PF12874.7	1.2e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000028131	-	1773	XM_005812741	ENSXMAP00000041804	590 (aa)	XP_005812798	-
ENSXMAT00000013881	-	2804	-	ENSXMAP00000013864	571 (aa)	-	M4AHC0

Gene Model

Click here to download ENSXMAG00000013825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013825	prdm5	100	82.167	ENSG00000138738	PRDM5	100	81.500	Homo_sapiens
ENSXMAG00000013825	prdm5	100	97.293	ENSAPOG00000023220	prdm5	100	97.293	Acanthochromis_polyacanthus
ENSXMAG00000013825	prdm5	91	73.124	ENSAMEG00000003050	PRDM5	99	76.337	Ailuropoda_melanoleuca
ENSXMAG00000013825	prdm5	100	96.441	ENSACIG00000000406	prdm5	100	96.441	Amphilophus_citrinellus
ENSXMAG00000013825	prdm5	100	97.804	ENSAOCG00000014806	prdm5	100	97.804	Amphiprion_ocellaris
ENSXMAG00000013825	prdm5	100	86.949	ENSAPEG00000016846	prdm5	100	88.254	Amphiprion_percula
ENSXMAG00000013825	prdm5	100	98.305	ENSATEG00000013829	prdm5	100	98.305	Anabas_testudineus
ENSXMAG00000013825	prdm5	95	82.753	ENSAPLG00000013828	PRDM5	100	82.753	Anas_platyrhynchos
ENSXMAG00000013825	prdm5	100	77.971	ENSACAG00000012999	PRDM5	100	77.971	Anolis_carolinensis
ENSXMAG00000013825	prdm5	100	89.333	ENSANAG00000027411	PRDM5	98	93.443	Aotus_nancymaae
ENSXMAG00000013825	prdm5	100	98.983	ENSACLG00000017996	prdm5	100	98.983	Astatotilapia_calliptera
ENSXMAG00000013825	prdm5	84	85.985	ENSAMXG00000041864	prdm5	99	89.709	Astyanax_mexicanus
ENSXMAG00000013825	prdm5	100	77.338	ENSBTAG00000012111	PRDM5	99	78.044	Bos_taurus
ENSXMAG00000013825	prdm5	100	88.667	ENSCJAG00000003133	PRDM5	98	93.443	Callithrix_jacchus
ENSXMAG00000013825	prdm5	91	73.318	ENSCAFG00000004179	PRDM5	98	73.318	Canis_familiaris
ENSXMAG00000013825	prdm5	100	81.000	ENSCAFG00020017685	PRDM5	100	80.667	Canis_lupus_dingo
ENSXMAG00000013825	prdm5	100	81.500	ENSCHIG00000018772	PRDM5	100	80.667	Capra_hircus
ENSXMAG00000013825	prdm5	95	81.942	ENSTSYG00000009630	PRDM5	94	81.165	Carlito_syrichta
ENSXMAG00000013825	prdm5	90	88.667	ENSCAPG00000015217	PRDM5	97	91.803	Cavia_aperea
ENSXMAG00000013825	prdm5	95	87.975	ENSCPOG00000012883	PRDM5	97	91.803	Cavia_porcellus
ENSXMAG00000013825	prdm5	100	89.333	ENSCCAG00000023157	PRDM5	98	93.443	Cebus_capucinus
ENSXMAG00000013825	prdm5	100	89.333	ENSCATG00000042510	PRDM5	98	93.443	Cercocebus_atys
ENSXMAG00000013825	prdm5	95	87.658	ENSCLAG00000005392	PRDM5	97	91.803	Chinchilla_lanigera
ENSXMAG00000013825	prdm5	100	82.167	ENSCSAG00000003729	PRDM5	100	82.000	Chlorocebus_sabaeus
ENSXMAG00000013825	prdm5	99	78.322	ENSCHOG00000007801	PRDM5	91	78.322	Choloepus_hoffmanni
ENSXMAG00000013825	prdm5	100	82.188	ENSCPBG00000024735	PRDM5	100	82.188	Chrysemys_picta_bellii
ENSXMAG00000013825	prdm5	100	89.333	ENSCANG00000036807	PRDM5	98	93.443	Colobus_angolensis_palliatus
ENSXMAG00000013825	prdm5	100	88.667	ENSCGRG00001010581	Prdm5	98	91.803	Cricetulus_griseus_chok1gshd
ENSXMAG00000013825	prdm5	95	73.333	ENSCGRG00000010996	-	99	73.333	Cricetulus_griseus_crigri
ENSXMAG00000013825	prdm5	100	94.266	ENSCSEG00000019979	prdm5	100	95.278	Cynoglossus_semilaevis
ENSXMAG00000013825	prdm5	100	88.889	ENSCVAG00000013692	prdm5	99	91.111	Cyprinodon_variegatus
ENSXMAG00000013825	prdm5	100	85.127	ENSDARG00000006288	prdm5	99	88.214	Danio_rerio
ENSXMAG00000013825	prdm5	91	76.736	ENSDNOG00000002009	PRDM5	100	76.736	Dasypus_novemcinctus
ENSXMAG00000013825	prdm5	100	87.342	ENSDORG00000007739	Prdm5	99	88.546	Dipodomys_ordii
ENSXMAG00000013825	prdm5	94	76.316	ENSETEG00000020268	PRDM5	85	82.474	Echinops_telfairi
ENSXMAG00000013825	prdm5	99	75.507	ENSEBUG00000004301	prdm5	100	75.507	Eptatretus_burgeri
ENSXMAG00000013825	prdm5	100	90.000	ENSEASG00005018365	PRDM5	99	93.443	Equus_asinus_asinus
ENSXMAG00000013825	prdm5	99	80.156	ENSECAG00000011516	PRDM5	89	79.767	Equus_caballus
ENSXMAG00000013825	prdm5	95	72.340	ENSECAG00000024747	-	100	76.636	Equus_caballus
ENSXMAG00000013825	prdm5	99	75.217	ENSEEUG00000010306	PRDM5	100	74.697	Erinaceus_europaeus
ENSXMAG00000013825	prdm5	96	93.784	ENSELUG00000005894	prdm5	96	92.819	Esox_lucius
ENSXMAG00000013825	prdm5	100	81.000	ENSFCAG00000025656	PRDM5	100	80.667	Felis_catus
ENSXMAG00000013825	prdm5	95	70.497	ENSFALG00000008381	PRDM5	100	75.466	Ficedula_albicollis
ENSXMAG00000013825	prdm5	100	88.667	ENSFDAG00000021361	PRDM5	98	91.803	Fukomys_damarensis
ENSXMAG00000013825	prdm5	100	98.814	ENSFHEG00000013040	prdm5	100	98.814	Fundulus_heteroclitus
ENSXMAG00000013825	prdm5	84	98.361	ENSGMOG00000012038	prdm5	99	98.361	Gadus_morhua
ENSXMAG00000013825	prdm5	100	83.438	ENSGALG00000011963	PRDM5	99	84.587	Gallus_gallus
ENSXMAG00000013825	prdm5	100	99.650	ENSGAFG00000019233	prdm5	100	99.650	Gambusia_affinis
ENSXMAG00000013825	prdm5	99	78.776	ENSGAGG00000020362	PRDM5	99	81.262	Gopherus_agassizii
ENSXMAG00000013825	prdm5	100	89.333	ENSGGOG00000013562	PRDM5	98	93.443	Gorilla_gorilla
ENSXMAG00000013825	prdm5	100	98.136	ENSHBUG00000023375	prdm5	100	98.136	Haplochromis_burtoni
ENSXMAG00000013825	prdm5	94	84.513	ENSHGLG00000003010	PRDM5	99	84.513	Heterocephalus_glaber_female
ENSXMAG00000013825	prdm5	100	88.667	ENSHGLG00100003696	PRDM5	98	91.803	Heterocephalus_glaber_male
ENSXMAG00000013825	prdm5	100	92.122	ENSHCOG00000012131	prdm5	99	94.640	Hippocampus_comes
ENSXMAG00000013825	prdm5	100	90.604	ENSIPUG00000001248	prdm5	100	90.651	Ictalurus_punctatus
ENSXMAG00000013825	prdm5	95	85.443	ENSSTOG00000004741	PRDM5	97	93.443	Ictidomys_tridecemlineatus
ENSXMAG00000013825	prdm5	95	87.658	ENSJJAG00000011464	Prdm5	97	91.803	Jaculus_jaculus
ENSXMAG00000013825	prdm5	100	97.635	ENSKMAG00000013663	prdm5	100	97.635	Kryptolebias_marmoratus
ENSXMAG00000013825	prdm5	100	92.915	ENSLBEG00000022736	prdm5	99	96.111	Labrus_bergylta
ENSXMAG00000013825	prdm5	91	82.038	ENSLACG00000009187	PRDM5	99	84.362	Latimeria_chalumnae
ENSXMAG00000013825	prdm5	100	88.179	ENSLOCG00000009778	prdm5	99	90.590	Lepisosteus_oculatus
ENSXMAG00000013825	prdm5	100	81.833	ENSLAFG00000006532	PRDM5	99	82.911	Loxodonta_africana
ENSXMAG00000013825	prdm5	100	89.333	ENSMFAG00000045845	PRDM5	98	93.443	Macaca_fascicularis
ENSXMAG00000013825	prdm5	100	89.333	ENSMMUG00000003249	PRDM5	98	93.443	Macaca_mulatta
ENSXMAG00000013825	prdm5	100	89.333	ENSMNEG00000019018	PRDM5	98	93.443	Macaca_nemestrina
ENSXMAG00000013825	prdm5	95	81.722	ENSMLEG00000023145	PRDM5	100	80.844	Mandrillus_leucophaeus
ENSXMAG00000013825	prdm5	100	94.926	ENSMAMG00000013419	prdm5	100	94.926	Mastacembelus_armatus
ENSXMAG00000013825	prdm5	100	98.136	ENSMZEG00005020645	prdm5	100	98.136	Maylandia_zebra
ENSXMAG00000013825	prdm5	95	83.085	ENSMGAG00000010710	PRDM5	100	83.085	Meleagris_gallopavo
ENSXMAG00000013825	prdm5	100	88.667	ENSMAUG00000006768	Prdm5	98	91.803	Mesocricetus_auratus
ENSXMAG00000013825	prdm5	100	88.667	ENSMICG00000001459	PRDM5	98	91.803	Microcebus_murinus
ENSXMAG00000013825	prdm5	100	88.667	ENSMOCG00000016267	Prdm5	98	91.803	Microtus_ochrogaster
ENSXMAG00000013825	prdm5	100	97.800	ENSMMOG00000006035	prdm5	100	97.800	Mola_mola
ENSXMAG00000013825	prdm5	100	78.357	ENSMODG00000018942	PRDM5	100	79.147	Monodelphis_domestica
ENSXMAG00000013825	prdm5	100	93.051	ENSMALG00000013934	prdm5	100	93.051	Monopterus_albus
ENSXMAG00000013825	prdm5	100	88.000	MGP_CAROLIEiJ_G0028463	Prdm5	98	91.803	Mus_caroli
ENSXMAG00000013825	prdm5	100	88.000	ENSMUSG00000029913	Prdm5	98	91.803	Mus_musculus
ENSXMAG00000013825	prdm5	100	88.000	MGP_PahariEiJ_G0022203	Prdm5	98	91.803	Mus_pahari
ENSXMAG00000013825	prdm5	100	88.000	MGP_SPRETEiJ_G0029467	Prdm5	98	91.803	Mus_spretus
ENSXMAG00000013825	prdm5	100	76.704	ENSMPUG00000017415	PRDM5	99	77.675	Mustela_putorius_furo
ENSXMAG00000013825	prdm5	91	69.775	ENSMLUG00000006097	PRDM5	99	70.817	Myotis_lucifugus
ENSXMAG00000013825	prdm5	100	88.000	ENSNGAG00000018317	Prdm5	98	91.803	Nannospalax_galili
ENSXMAG00000013825	prdm5	100	88.147	ENSNBRG00000004976	prdm5	100	94.595	Neolamprologus_brichardi
ENSXMAG00000013825	prdm5	100	89.333	ENSNLEG00000009107	PRDM5	98	93.443	Nomascus_leucogenys
ENSXMAG00000013825	prdm5	77	98.621	ENSMEUG00000006576	-	70	98.621	Notamacropus_eugenii
ENSXMAG00000013825	prdm5	93	82.510	ENSOPRG00000011066	-	66	78.305	Ochotona_princeps
ENSXMAG00000013825	prdm5	99	88.667	ENSODEG00000009133	PRDM5	98	91.803	Octodon_degus
ENSXMAG00000013825	prdm5	95	98.155	ENSONIG00000003111	prdm5	99	98.155	Oreochromis_niloticus
ENSXMAG00000013825	prdm5	99	81.186	ENSOANG00000015109	PRDM5	97	81.109	Ornithorhynchus_anatinus
ENSXMAG00000013825	prdm5	53	95.556	ENSOANG00000006197	-	100	95.556	Ornithorhynchus_anatinus
ENSXMAG00000013825	prdm5	90	75.969	ENSOCUG00000013454	PRDM5	99	75.775	Oryctolagus_cuniculus
ENSXMAG00000013825	prdm5	100	97.288	ENSORLG00000016247	prdm5	100	97.288	Oryzias_latipes
ENSXMAG00000013825	prdm5	100	95.932	ENSORLG00020018051	prdm5	100	95.439	Oryzias_latipes_hni
ENSXMAG00000013825	prdm5	100	97.288	ENSORLG00015013760	prdm5	100	97.288	Oryzias_latipes_hsok
ENSXMAG00000013825	prdm5	100	97.124	ENSOMEG00000005143	prdm5	100	97.124	Oryzias_melastigma
ENSXMAG00000013825	prdm5	83	68.045	ENSOGAG00000009996	PRDM5	98	68.843	Otolemur_garnettii
ENSXMAG00000013825	prdm5	95	76.852	ENSOARG00000015473	PRDM5	100	76.419	Ovis_aries
ENSXMAG00000013825	prdm5	95	81.748	ENSPPAG00000043045	PRDM5	100	80.971	Pan_paniscus
ENSXMAG00000013825	prdm5	100	81.000	ENSPPRG00000001020	PRDM5	100	80.667	Panthera_pardus
ENSXMAG00000013825	prdm5	95	80.668	ENSPTIG00000010807	PRDM5	95	80.316	Panthera_tigris_altaica
ENSXMAG00000013825	prdm5	100	89.333	ENSPTRG00000016403	PRDM5	98	93.443	Pan_troglodytes
ENSXMAG00000013825	prdm5	100	89.333	ENSPANG00000023612	PRDM5	98	93.443	Papio_anubis
ENSXMAG00000013825	prdm5	99	62.782	ENSPKIG00000015492	prdm5	100	68.053	Paramormyrops_kingsleyae
ENSXMAG00000013825	prdm5	100	82.177	ENSPSIG00000013505	PRDM5	100	82.177	Pelodiscus_sinensis
ENSXMAG00000013825	prdm5	100	94.915	ENSPMGG00000012622	prdm5	100	94.915	Periophthalmus_magnuspinnatus
ENSXMAG00000013825	prdm5	73	69.492	ENSPMAG00000005248	prdm5	100	70.460	Petromyzon_marinus
ENSXMAG00000013825	prdm5	98	97.312	ENSPFOG00000018630	prdm5	99	97.312	Poecilia_formosa
ENSXMAG00000013825	prdm5	100	94.677	ENSPLAG00000014148	prdm5	99	97.037	Poecilia_latipinna
ENSXMAG00000013825	prdm5	100	99.661	ENSPMEG00000018002	prdm5	100	99.661	Poecilia_mexicana
ENSXMAG00000013825	prdm5	100	99.661	ENSPREG00000018366	prdm5	100	99.661	Poecilia_reticulata
ENSXMAG00000013825	prdm5	100	78.130	ENSPPYG00000015031	PRDM5	99	78.782	Pongo_abelii
ENSXMAG00000013825	prdm5	95	72.000	ENSPCAG00000011671	PRDM5	100	71.500	Procavia_capensis
ENSXMAG00000013825	prdm5	100	88.667	ENSPCOG00000022828	PRDM5	98	91.803	Propithecus_coquereli
ENSXMAG00000013825	prdm5	95	74.000	ENSPVAG00000012309	PRDM5	100	73.667	Pteropus_vampyrus
ENSXMAG00000013825	prdm5	100	98.814	ENSPNYG00000012194	prdm5	100	98.814	Pundamilia_nyererei
ENSXMAG00000013825	prdm5	93	81.494	ENSPNAG00000023191	-	99	87.000	Pygocentrus_nattereri
ENSXMAG00000013825	prdm5	100	92.929	ENSPNAG00000026181	prdm5	100	93.098	Pygocentrus_nattereri
ENSXMAG00000013825	prdm5	99	78.853	ENSRNOG00000023679	Prdm5	99	78.853	Rattus_norvegicus
ENSXMAG00000013825	prdm5	100	89.333	ENSRBIG00000041307	PRDM5	98	93.443	Rhinopithecus_bieti
ENSXMAG00000013825	prdm5	94	69.464	ENSRROG00000035343	PRDM5	100	72.583	Rhinopithecus_roxellana
ENSXMAG00000013825	prdm5	100	89.333	ENSSBOG00000022100	PRDM5	98	93.443	Saimiri_boliviensis_boliviensis
ENSXMAG00000013825	prdm5	90	74.847	ENSSHAG00000003250	PRDM5	100	78.528	Sarcophilus_harrisii
ENSXMAG00000013825	prdm5	100	86.942	ENSSFOG00015020478	prdm5	100	86.942	Scleropages_formosus
ENSXMAG00000013825	prdm5	100	98.136	ENSSMAG00000018844	prdm5	100	98.136	Scophthalmus_maximus
ENSXMAG00000013825	prdm5	100	97.966	ENSSDUG00000020397	prdm5	100	97.966	Seriola_dumerili
ENSXMAG00000013825	prdm5	100	97.966	ENSSLDG00000013353	prdm5	100	97.966	Seriola_lalandi_dorsalis
ENSXMAG00000013825	prdm5	85	92.857	ENSSARG00000014129	-	65	92.857	Sorex_araneus
ENSXMAG00000013825	prdm5	100	96.000	ENSSPUG00000009941	PRDM5	100	96.000	Sphenodon_punctatus
ENSXMAG00000013825	prdm5	100	93.559	ENSSPAG00000013866	prdm5	99	96.667	Stegastes_partitus
ENSXMAG00000013825	prdm5	100	81.500	ENSSSCG00000009101	PRDM5	100	81.167	Sus_scrofa
ENSXMAG00000013825	prdm5	95	83.333	ENSTGUG00000001920	PRDM5	99	84.344	Taeniopygia_guttata
ENSXMAG00000013825	prdm5	100	95.278	ENSTRUG00000013850	prdm5	100	96.121	Takifugu_rubripes
ENSXMAG00000013825	prdm5	100	76.183	ENSTNIG00000005901	prdm5	100	76.744	Tetraodon_nigroviridis
ENSXMAG00000013825	prdm5	89	93.333	ENSTBEG00000015386	PRDM5	85	93.333	Tupaia_belangeri
ENSXMAG00000013825	prdm5	100	76.545	ENSTTRG00000010996	PRDM5	100	76.545	Tursiops_truncatus
ENSXMAG00000013825	prdm5	95	87.607	ENSUAMG00000009994	PRDM5	80	83.806	Ursus_americanus
ENSXMAG00000013825	prdm5	95	88.924	ENSUMAG00000003733	PRDM5	99	88.924	Ursus_maritimus
ENSXMAG00000013825	prdm5	97	68.189	ENSVPAG00000007435	PRDM5	99	70.992	Vicugna_pacos
ENSXMAG00000013825	prdm5	93	76.020	ENSVVUG00000013192	PRDM5	99	76.954	Vulpes_vulpes
ENSXMAG00000013825	prdm5	100	79.114	ENSXETG00000002101	prdm5	100	79.114	Xenopus_tropicalis
ENSXMAG00000013825	prdm5	100	100.000	ENSXCOG00000008567	prdm5	100	100.000	Xiphophorus_couchianus