EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000013998 (Gene tree)
Gene ID: 102228553
Gene Symbol: smpd5
Alias: Mitochondrial SMase|smpdm|zgc:153995
Full Name: sphingomyelin phosphodiesterase 5-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 4532 bases
Position: chr3:15443157-15447688
Accession: 102228553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000025863	Exo_endo_phos	PF03372.23	5.3e-07	1	1
ENSXMAP00000014028	Exo_endo_phos	PF03372.23	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000014047	-	2042	XM_005804654	ENSXMAP00000014028	573 (aa)	XP_005804711	M4AHT4
ENSXMAT00000034255	-	1674	-	ENSXMAP00000025863	557 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000013998's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00600	Sphingolipid metabolism	KEGG
xma01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000013998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000013998	smpd5	100	72.727	ENSAPOG00000005846	smpd5	100	72.727	Acanthochromis_polyacanthus
ENSXMAG00000013998	smpd5	86	44.068	ENSAMEG00000006154	-	98	44.068	Ailuropoda_melanoleuca
ENSXMAG00000013998	smpd5	100	72.260	ENSACIG00000015732	smpd5	100	72.260	Amphilophus_citrinellus
ENSXMAG00000013998	smpd5	100	72.939	ENSAOCG00000001729	smpd5	100	72.939	Amphiprion_ocellaris
ENSXMAG00000013998	smpd5	100	73.242	ENSAPEG00000010110	smpd5	100	73.242	Amphiprion_percula
ENSXMAG00000013998	smpd5	100	70.990	ENSATEG00000005476	smpd5	100	70.990	Anabas_testudineus
ENSXMAG00000013998	smpd5	85	41.875	ENSACAG00000005338	-	99	41.875	Anolis_carolinensis
ENSXMAG00000013998	smpd5	100	72.569	ENSACLG00000004150	smpd5	100	72.569	Astatotilapia_calliptera
ENSXMAG00000013998	smpd5	99	42.080	ENSAMXG00000009000	smpd3	99	42.080	Astyanax_mexicanus
ENSXMAG00000013998	smpd5	99	60.145	ENSAMXG00000015890	smpd5	100	60.145	Astyanax_mexicanus
ENSXMAG00000013998	smpd5	59	82.143	ENSBTAG00000015040	-	93	40.882	Bos_taurus
ENSXMAG00000013998	smpd5	87	45.455	ENSCAFG00020018801	-	95	45.455	Canis_lupus_dingo
ENSXMAG00000013998	smpd5	82	50.825	ENSCPBG00000007123	-	92	50.327	Chrysemys_picta_bellii
ENSXMAG00000013998	smpd5	87	46.000	ENSCGRG00001020226	Smpd5	94	46.000	Cricetulus_griseus_chok1gshd
ENSXMAG00000013998	smpd5	87	46.000	ENSCGRG00000016807	Smpd5	94	46.000	Cricetulus_griseus_crigri
ENSXMAG00000013998	smpd5	90	69.750	ENSCSEG00000004339	smpd5	93	69.750	Cynoglossus_semilaevis
ENSXMAG00000013998	smpd5	99	61.250	ENSDARG00000059811	smpd5	100	61.250	Danio_rerio
ENSXMAG00000013998	smpd5	86	45.791	ENSEASG00005009745	-	97	47.138	Equus_asinus_asinus
ENSXMAG00000013998	smpd5	86	47.138	ENSECAG00000011998	-	97	47.138	Equus_caballus
ENSXMAG00000013998	smpd5	99	61.436	ENSELUG00000002998	smpd5	99	61.937	Esox_lucius
ENSXMAG00000013998	smpd5	95	46.194	ENSFCAG00000023364	SMPD3	99	39.726	Felis_catus
ENSXMAG00000013998	smpd5	80	67.841	ENSGMOG00000006983	smpd5	100	68.282	Gadus_morhua
ENSXMAG00000013998	smpd5	100	96.684	ENSGAFG00000005978	smpd5	100	96.684	Gambusia_affinis
ENSXMAG00000013998	smpd5	98	39.138	ENSGAGG00000010557	-	99	45.697	Gopherus_agassizii
ENSXMAG00000013998	smpd5	100	72.569	ENSHBUG00000017212	smpd5	100	72.569	Haplochromis_burtoni
ENSXMAG00000013998	smpd5	99	68.149	ENSHCOG00000005211	smpd5	99	68.149	Hippocampus_comes
ENSXMAG00000013998	smpd5	99	58.082	ENSIPUG00000007675	Smpd3	99	58.082	Ictalurus_punctatus
ENSXMAG00000013998	smpd5	88	45.631	ENSSTOG00000026841	-	97	45.631	Ictidomys_tridecemlineatus
ENSXMAG00000013998	smpd5	88	72.455	ENSKMAG00000014523	smpd5	99	72.455	Kryptolebias_marmoratus
ENSXMAG00000013998	smpd5	100	70.137	ENSLBEG00000000634	smpd5	99	70.137	Labrus_bergylta
ENSXMAG00000013998	smpd5	100	72.479	ENSMAMG00000012885	smpd5	100	72.479	Mastacembelus_armatus
ENSXMAG00000013998	smpd5	100	72.743	ENSMZEG00005014373	smpd5	100	72.743	Maylandia_zebra
ENSXMAG00000013998	smpd5	89	41.618	ENSMICG00000044882	-	97	41.618	Microcebus_murinus
ENSXMAG00000013998	smpd5	82	45.333	ENSMOCG00000004813	Smpd5	90	45.333	Microtus_ochrogaster
ENSXMAG00000013998	smpd5	95	45.040	ENSMODG00000005091	SMPD3	84	44.935	Monodelphis_domestica
ENSXMAG00000013998	smpd5	85	43.289	ENSMODG00000024098	-	95	44.631	Monodelphis_domestica
ENSXMAG00000013998	smpd5	82	45.946	ENSMPUG00000007287	-	96	45.946	Mustela_putorius_furo
ENSXMAG00000013998	smpd5	100	72.222	ENSNBRG00000015871	smpd5	100	72.222	Neolamprologus_brichardi
ENSXMAG00000013998	smpd5	67	43.142	ENSMEUG00000015228	-	94	43.392	Notamacropus_eugenii
ENSXMAG00000013998	smpd5	100	72.396	ENSONIG00000003005	smpd5	100	72.396	Oreochromis_niloticus
ENSXMAG00000013998	smpd5	55	43.631	ENSOANG00000015137	-	92	43.949	Ornithorhynchus_anatinus
ENSXMAG00000013998	smpd5	100	69.430	ENSORLG00000007890	smpd5	100	69.430	Oryzias_latipes
ENSXMAG00000013998	smpd5	100	70.139	ENSORLG00020014621	smpd5	100	70.139	Oryzias_latipes_hni
ENSXMAG00000013998	smpd5	100	69.565	ENSORLG00015020862	smpd5	100	69.565	Oryzias_latipes_hsok
ENSXMAG00000013998	smpd5	100	69.204	ENSOMEG00000021400	smpd5	100	69.204	Oryzias_melastigma
ENSXMAG00000013998	smpd5	80	43.354	ENSOARG00000015429	-	83	43.354	Ovis_aries
ENSXMAG00000013998	smpd5	85	45.270	ENSPPRG00000024542	-	97	45.270	Panthera_pardus
ENSXMAG00000013998	smpd5	99	39.787	ENSPPRG00000012973	SMPD3	99	39.634	Panthera_pardus
ENSXMAG00000013998	smpd5	99	42.857	ENSPTIG00000006728	SMPD3	99	42.857	Panthera_tigris_altaica
ENSXMAG00000013998	smpd5	99	41.889	ENSPKIG00000015630	smpd3	99	38.331	Paramormyrops_kingsleyae
ENSXMAG00000013998	smpd5	99	58.025	ENSPKIG00000019783	smpd5	99	58.025	Paramormyrops_kingsleyae
ENSXMAG00000013998	smpd5	98	66.788	ENSPMGG00000011984	smpd5	98	66.788	Periophthalmus_magnuspinnatus
ENSXMAG00000013998	smpd5	81	44.407	ENSPEMG00000015740	Smpd5	89	44.407	Peromyscus_maniculatus_bairdii
ENSXMAG00000013998	smpd5	84	44.108	ENSPCIG00000009107	-	91	45.033	Phascolarctos_cinereus
ENSXMAG00000013998	smpd5	100	94.618	ENSPFOG00000002379	smpd5	100	94.618	Poecilia_formosa
ENSXMAG00000013998	smpd5	100	94.590	ENSPLAG00000015772	smpd5	100	94.590	Poecilia_latipinna
ENSXMAG00000013998	smpd5	100	94.939	ENSPMEG00000001599	smpd5	100	94.939	Poecilia_mexicana
ENSXMAG00000013998	smpd5	100	95.812	ENSPREG00000000831	smpd5	100	95.812	Poecilia_reticulata
ENSXMAG00000013998	smpd5	100	72.172	ENSPNYG00000015647	smpd5	100	72.172	Pundamilia_nyererei
ENSXMAG00000013998	smpd5	97	49.080	ENSPNAG00000001774	smpd3	83	49.080	Pygocentrus_nattereri
ENSXMAG00000013998	smpd5	99	59.894	ENSPNAG00000018539	smpd5	100	59.894	Pygocentrus_nattereri
ENSXMAG00000013998	smpd5	84	41.975	ENSSHAG00000004065	-	94	43.210	Sarcophilus_harrisii
ENSXMAG00000013998	smpd5	95	43.896	ENSSHAG00000006412	SMPD3	89	43.896	Sarcophilus_harrisii
ENSXMAG00000013998	smpd5	99	56.616	ENSSFOG00015000870	smpd5	99	56.616	Scleropages_formosus
ENSXMAG00000013998	smpd5	100	72.355	ENSSMAG00000020132	smpd5	100	72.355	Scophthalmus_maximus
ENSXMAG00000013998	smpd5	100	68.771	ENSSDUG00000005881	smpd5	100	68.771	Seriola_dumerili
ENSXMAG00000013998	smpd5	100	68.259	ENSSLDG00000015320	smpd5	100	68.259	Seriola_lalandi_dorsalis
ENSXMAG00000013998	smpd5	99	72.464	ENSSPAG00000007973	smpd5	99	72.464	Stegastes_partitus
ENSXMAG00000013998	smpd5	53	45.118	ENSSSCG00000005922	-	96	45.118	Sus_scrofa
ENSXMAG00000013998	smpd5	99	69.947	ENSTRUG00000014862	smpd5	99	69.947	Takifugu_rubripes
ENSXMAG00000013998	smpd5	99	69.420	ENSTNIG00000018420	smpd5	99	69.420	Tetraodon_nigroviridis
ENSXMAG00000013998	smpd5	99	43.920	ENSXETG00000031246	-	99	44.102	Xenopus_tropicalis
ENSXMAG00000013998	smpd5	86	52.229	ENSXETG00000006675	smpd3	73	52.229	Xenopus_tropicalis
ENSXMAG00000013998	smpd5	100	98.564	ENSXCOG00000019783	smpd5	100	98.564	Xiphophorus_couchianus