EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014097 (Gene tree)
Gene ID: 102225235
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 19190 bases
Position: chr8:13591799-13610988
Accession: 102225235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000014138	RRM_1	PF00076.22	2.1e-09	1	1
ENSXMAP00000035189	RRM_1	PF00076.22	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000014157	-	7544	XM_014474019	ENSXMAP00000014138	1795 (aa)	XP_014329505	M4AI44
ENSXMAT00000040803	-	8465	-	ENSXMAP00000035189	1865 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000014097's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014097	setd1ba	100	72.963	ENSACIG00000016453	setd1ba	56	81.854	Amphilophus_citrinellus
ENSXMAG00000014097	setd1ba	100	76.280	ENSAPEG00000010762	setd1ba	55	81.164	Amphiprion_percula
ENSXMAG00000014097	setd1ba	97	80.864	ENSATEG00000021563	setd1ba	98	81.651	Anabas_testudineus
ENSXMAG00000014097	setd1ba	87	57.863	ENSAPLG00000005217	SETD1B	83	59.683	Anas_platyrhynchos
ENSXMAG00000014097	setd1ba	54	80.243	ENSCAFG00000008167	SETD1B	86	57.006	Canis_familiaris
ENSXMAG00000014097	setd1ba	54	73.491	ENSCHIG00000013406	SETD1B	87	60.206	Capra_hircus
ENSXMAG00000014097	setd1ba	55	63.063	ENSDARG00000060847	setd1ba	52	63.494	Danio_rerio
ENSXMAG00000014097	setd1ba	51	80.488	ENSFCAG00000013185	SETD1B	93	51.817	Felis_catus
ENSXMAG00000014097	setd1ba	51	85.390	ENSFALG00000009136	SETD1B	83	58.583	Ficedula_albicollis
ENSXMAG00000014097	setd1ba	52	75.802	ENSFDAG00000015120	SETD1B	73	74.571	Fukomys_damarensis
ENSXMAG00000014097	setd1ba	100	84.234	ENSFHEG00000013126	setd1ba	100	85.667	Fundulus_heteroclitus
ENSXMAG00000014097	setd1ba	53	89.841	ENSGMOG00000009831	setd1ba	59	89.841	Gadus_morhua
ENSXMAG00000014097	setd1ba	95	96.607	ENSGAFG00000008712	setd1ba	96	96.588	Gambusia_affinis
ENSXMAG00000014097	setd1ba	100	72.253	ENSLBEG00000020113	setd1ba	53	76.141	Labrus_bergylta
ENSXMAG00000014097	setd1ba	70	79.874	ENSLAFG00000026518	SETD1B	74	78.221	Loxodonta_africana
ENSXMAG00000014097	setd1ba	63	57.610	ENSMFAG00000030930	SETD1B	86	58.756	Macaca_fascicularis
ENSXMAG00000014097	setd1ba	53	81.010	ENSMMOG00000008190	setd1ba	55	80.906	Mola_mola
ENSXMAG00000014097	setd1ba	100	76.729	ENSNBRG00000002915	setd1ba	54	83.533	Neolamprologus_brichardi
ENSXMAG00000014097	setd1ba	50	82.278	ENSNLEG00000001254	SETD1B	89	55.932	Nomascus_leucogenys
ENSXMAG00000014097	setd1ba	67	79.091	ENSODEG00000010155	SETD1B	84	52.603	Octodon_degus
ENSXMAG00000014097	setd1ba	100	77.382	ENSONIG00000013898	setd1ba	55	82.157	Oreochromis_niloticus
ENSXMAG00000014097	setd1ba	79	59.359	ENSOCUG00000017708	SETD1B	85	59.635	Oryctolagus_cuniculus
ENSXMAG00000014097	setd1ba	66	71.703	ENSORLG00015004156	setd1ba	81	78.522	Oryzias_latipes_hsok
ENSXMAG00000014097	setd1ba	88	77.759	ENSPMGG00000011527	setd1ba	91	77.759	Periophthalmus_magnuspinnatus
ENSXMAG00000014097	setd1ba	66	80.696	ENSPCIG00000028605	SETD1B	89	56.719	Phascolarctos_cinereus
ENSXMAG00000014097	setd1ba	100	93.944	ENSPFOG00000019768	setd1ba	99	93.966	Poecilia_formosa
ENSXMAG00000014097	setd1ba	100	95.225	ENSPLAG00000023459	setd1ba	99	95.230	Poecilia_latipinna
ENSXMAG00000014097	setd1ba	100	93.889	ENSPMEG00000020446	setd1ba	99	93.911	Poecilia_mexicana
ENSXMAG00000014097	setd1ba	100	95.778	ENSPREG00000011589	setd1ba	99	95.778	Poecilia_reticulata
ENSXMAG00000014097	setd1ba	100	76.551	ENSPNYG00000009484	setd1ba	55	83.633	Pundamilia_nyererei
ENSXMAG00000014097	setd1ba	76	57.898	ENSPNAG00000016011	setd1ba	57	63.732	Pygocentrus_nattereri
ENSXMAG00000014097	setd1ba	81	70.765	ENSSFOG00015004814	SETD1B	85	77.918	Scleropages_formosus
ENSXMAG00000014097	setd1ba	100	79.286	ENSSPAG00000015470	setd1ba	99	79.164	Stegastes_partitus
ENSXMAG00000014097	setd1ba	80	59.622	ENSSSCG00000009806	SETD1B	91	60.245	Sus_scrofa
ENSXMAG00000014097	setd1ba	94	76.287	ENSTRUG00000009533	setd1ba	91	76.715	Takifugu_rubripes
ENSXMAG00000014097	setd1ba	67	79.878	ENSUAMG00000008729	SETD1B	80	57.484	Ursus_americanus
ENSXMAG00000014097	setd1ba	100	96.009	ENSXCOG00000004451	setd1ba	99	95.487	Xiphophorus_couchianus