EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014115 (Gene tree)
Gene ID: 102225102
Gene Symbol: -
Alias: -
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 128515 bases
Position: chr21:2159767-2288281
Accession: 102225102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000014162	Ribonuclease_3	PF00636.26	1.4e-42	1	2
ENSXMAP00000014162	Ribonuclease_3	PF00636.26	1.4e-42	2	2
ENSXMAP00000034925	Ribonuclease_3	PF00636.26	1.4e-42	1	2
ENSXMAP00000034925	Ribonuclease_3	PF00636.26	1.4e-42	2	2
ENSXMAP00000014162	dsrm	PF00035.26	1.1e-14	1	1
ENSXMAP00000034925	dsrm	PF00035.26	1.1e-14	1	1
ENSXMAP00000014162	Ribonucleas_3_3	PF14622.6	1.5e-43	1	2
ENSXMAP00000014162	Ribonucleas_3_3	PF14622.6	1.5e-43	2	2
ENSXMAP00000034925	Ribonucleas_3_3	PF14622.6	1.6e-43	1	2
ENSXMAP00000034925	Ribonucleas_3_3	PF14622.6	1.6e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000024542	-	4309	XM_023326463	ENSXMAP00000034925	1306 (aa)	XP_023182231	UPI000C6D02C5
ENSXMAT00000014181	-	3852	-	ENSXMAP00000014162	1283 (aa)	-	M4AI68

Gene Model

Click here to download ENSXMAG00000014115's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014115	-	98	89.462	ENSKMAG00000021773	-	100	87.547	Kryptolebias_marmoratus
ENSXMAG00000014115	-	90	80.623	ENSOARG00000012525	-	93	83.141	Ovis_aries
ENSXMAG00000014115	-	90	81.052	ENSPSIG00000008708	-	96	83.319	Pelodiscus_sinensis
ENSXMAG00000014115	-	98	88.388	ENSSPAG00000020364	-	95	96.920	Stegastes_partitus