EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014176 (Gene tree)
Gene ID: 102237633
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 25904 bases
Position: chr13:11615614-11641517
Accession: 102237633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000014214	Not3	PF04065.15	1.9e-94	1	1
ENSXMAP00000014214	NOT2_3_5	PF04153.18	1.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000014233	-	5672	XM_023344913	ENSXMAP00000014214	906 (aa)	XP_023200681	M4AIC0

Gene Model

Click here to download ENSXMAG00000014176's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014176	cnot3b	75	73.858	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSXMAG00000014176	cnot3b	57	78.136	ENSAPOG00000015499	CNOT3	92	78.136	Acanthochromis_polyacanthus
ENSXMAG00000014176	cnot3b	65	93.607	ENSAPOG00000015002	cnot3b	96	93.607	Acanthochromis_polyacanthus
ENSXMAG00000014176	cnot3b	69	89.145	ENSAMEG00000004528	CNOT3	85	88.852	Ailuropoda_melanoleuca
ENSXMAG00000014176	cnot3b	60	89.316	ENSACIG00000006635	cnot3a	85	91.441	Amphilophus_citrinellus
ENSXMAG00000014176	cnot3b	65	93.304	ENSACIG00000003652	cnot3b	95	94.545	Amphilophus_citrinellus
ENSXMAG00000014176	cnot3b	97	74.695	ENSAOCG00000018385	-	98	79.052	Amphiprion_ocellaris
ENSXMAG00000014176	cnot3b	97	77.051	ENSAPEG00000002640	cnot3b	98	95.960	Amphiprion_percula
ENSXMAG00000014176	cnot3b	100	82.215	ENSATEG00000015777	cnot3b	100	81.150	Anabas_testudineus
ENSXMAG00000014176	cnot3b	100	63.810	ENSATEG00000022737	cnot3a	100	63.514	Anabas_testudineus
ENSXMAG00000014176	cnot3b	74	76.208	ENSACAG00000016085	CNOT3	88	89.803	Anolis_carolinensis
ENSXMAG00000014176	cnot3b	75	74.365	ENSANAG00000025756	CNOT3	85	89.180	Aotus_nancymaae
ENSXMAG00000014176	cnot3b	100	80.472	ENSACLG00000016702	cnot3b	100	79.872	Astatotilapia_calliptera
ENSXMAG00000014176	cnot3b	100	68.114	ENSAMXG00000009447	cnot3b	97	91.398	Astyanax_mexicanus
ENSXMAG00000014176	cnot3b	100	67.562	ENSAMXG00000012359	cnot3a	100	66.488	Astyanax_mexicanus
ENSXMAG00000014176	cnot3b	67	89.474	ENSBTAG00000014900	CNOT3	86	89.180	Bos_taurus
ENSXMAG00000014176	cnot3b	75	74.365	ENSCJAG00000001094	CNOT3	85	89.180	Callithrix_jacchus
ENSXMAG00000014176	cnot3b	79	73.858	ENSCAFG00000002699	CNOT3	85	89.180	Canis_familiaris
ENSXMAG00000014176	cnot3b	79	73.858	ENSCAFG00020018359	CNOT3	85	89.180	Canis_lupus_dingo
ENSXMAG00000014176	cnot3b	62	87.459	ENSCHIG00000015302	CNOT3	77	87.171	Capra_hircus
ENSXMAG00000014176	cnot3b	75	73.858	ENSTSYG00000008058	CNOT3	85	89.180	Carlito_syrichta
ENSXMAG00000014176	cnot3b	77	75.578	ENSCAPG00000009533	CNOT3	85	89.180	Cavia_aperea
ENSXMAG00000014176	cnot3b	87	75.127	ENSCPOG00000020741	CNOT3	85	89.180	Cavia_porcellus
ENSXMAG00000014176	cnot3b	75	74.112	ENSCCAG00000036290	CNOT3	85	89.180	Cebus_capucinus
ENSXMAG00000014176	cnot3b	75	73.858	ENSCATG00000030324	CNOT3	85	89.180	Cercocebus_atys
ENSXMAG00000014176	cnot3b	86	75.578	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSXMAG00000014176	cnot3b	75	74.112	ENSCSAG00000001900	CNOT3	85	89.180	Chlorocebus_sabaeus
ENSXMAG00000014176	cnot3b	89	67.456	ENSCPBG00000011655	CNOT3	88	90.492	Chrysemys_picta_bellii
ENSXMAG00000014176	cnot3b	81	56.825	ENSCING00000000293	-	71	70.721	Ciona_intestinalis
ENSXMAG00000014176	cnot3b	75	73.858	ENSCANG00000013408	CNOT3	85	89.180	Colobus_angolensis_palliatus
ENSXMAG00000014176	cnot3b	83	76.596	ENSCGRG00001000855	Cnot3	85	89.508	Cricetulus_griseus_chok1gshd
ENSXMAG00000014176	cnot3b	90	82.353	ENSCSEG00000016892	cnot3b	99	78.099	Cynoglossus_semilaevis
ENSXMAG00000014176	cnot3b	100	90.659	ENSCVAG00000022122	cnot3b	100	90.769	Cyprinodon_variegatus
ENSXMAG00000014176	cnot3b	100	63.113	ENSCVAG00000008168	cnot3a	100	63.191	Cyprinodon_variegatus
ENSXMAG00000014176	cnot3b	100	68.608	ENSDARG00000019842	cnot3b	100	69.598	Danio_rerio
ENSXMAG00000014176	cnot3b	100	64.637	ENSDARG00000007135	cnot3a	100	66.811	Danio_rerio
ENSXMAG00000014176	cnot3b	67	89.145	ENSDNOG00000045972	CNOT3	85	88.852	Dasypus_novemcinctus
ENSXMAG00000014176	cnot3b	77	74.807	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSXMAG00000014176	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSXMAG00000014176	cnot3b	59	69.481	ENSEBUG00000010437	cnot3a	82	66.883	Eptatretus_burgeri
ENSXMAG00000014176	cnot3b	75	74.112	ENSEASG00005021591	CNOT3	84	89.180	Equus_asinus_asinus
ENSXMAG00000014176	cnot3b	75	74.112	ENSECAG00000023181	CNOT3	84	89.180	Equus_caballus
ENSXMAG00000014176	cnot3b	100	71.579	ENSELUG00000000953	cnot3b	100	72.516	Esox_lucius
ENSXMAG00000014176	cnot3b	100	61.885	ENSELUG00000014743	cnot3a	100	63.562	Esox_lucius
ENSXMAG00000014176	cnot3b	81	76.031	ENSFCAG00000014042	CNOT3	85	89.180	Felis_catus
ENSXMAG00000014176	cnot3b	60	89.744	ENSFHEG00000023166	cnot3a	76	91.892	Fundulus_heteroclitus
ENSXMAG00000014176	cnot3b	100	90.632	ENSFHEG00000001696	cnot3b	100	90.850	Fundulus_heteroclitus
ENSXMAG00000014176	cnot3b	94	60.571	ENSGMOG00000005365	cnot3a	98	61.905	Gadus_morhua
ENSXMAG00000014176	cnot3b	100	97.023	ENSGAFG00000003459	cnot3b	100	97.023	Gambusia_affinis
ENSXMAG00000014176	cnot3b	52	66.460	ENSGACG00000009395	cnot3b	64	66.667	Gasterosteus_aculeatus
ENSXMAG00000014176	cnot3b	85	65.275	ENSGAGG00000012677	CNOT3	87	88.073	Gopherus_agassizii
ENSXMAG00000014176	cnot3b	75	73.858	ENSGGOG00000012996	CNOT3	85	89.180	Gorilla_gorilla
ENSXMAG00000014176	cnot3b	99	71.598	ENSHBUG00000019699	cnot3b	99	72.414	Haplochromis_burtoni
ENSXMAG00000014176	cnot3b	67	89.474	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSXMAG00000014176	cnot3b	60	81.226	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSXMAG00000014176	cnot3b	51	89.316	ENSHCOG00000020968	cnot3a	100	63.819	Hippocampus_comes
ENSXMAG00000014176	cnot3b	100	60.523	ENSIPUG00000000167	cnot3	100	62.311	Ictalurus_punctatus
ENSXMAG00000014176	cnot3b	100	66.630	ENSIPUG00000009046	cnot3b	100	65.832	Ictalurus_punctatus
ENSXMAG00000014176	cnot3b	77	72.277	ENSSTOG00000028248	CNOT3	85	89.180	Ictidomys_tridecemlineatus
ENSXMAG00000014176	cnot3b	85	74.619	ENSJJAG00000014594	Cnot3	99	89.508	Jaculus_jaculus
ENSXMAG00000014176	cnot3b	100	84.273	ENSKMAG00000018723	cnot3b	100	86.102	Kryptolebias_marmoratus
ENSXMAG00000014176	cnot3b	100	62.137	ENSKMAG00000004863	cnot3a	100	79.703	Kryptolebias_marmoratus
ENSXMAG00000014176	cnot3b	96	79.596	ENSLBEG00000018278	cnot3b	99	78.859	Labrus_bergylta
ENSXMAG00000014176	cnot3b	68	86.614	ENSLBEG00000017296	cnot3a	74	86.614	Labrus_bergylta
ENSXMAG00000014176	cnot3b	68	90.789	ENSLACG00000009742	CNOT3	88	90.492	Latimeria_chalumnae
ENSXMAG00000014176	cnot3b	54	93.407	ENSLOCG00000000005	cnot3b	79	93.407	Lepisosteus_oculatus
ENSXMAG00000014176	cnot3b	75	73.671	ENSLAFG00000022133	CNOT3	85	88.235	Loxodonta_africana
ENSXMAG00000014176	cnot3b	79	74.365	ENSMFAG00000040073	CNOT3	85	89.180	Macaca_fascicularis
ENSXMAG00000014176	cnot3b	60	89.076	ENSMMUG00000009698	CNOT3	100	99.020	Macaca_mulatta
ENSXMAG00000014176	cnot3b	75	73.858	ENSMNEG00000036750	CNOT3	85	89.180	Macaca_nemestrina
ENSXMAG00000014176	cnot3b	75	73.858	ENSMLEG00000036579	CNOT3	84	89.180	Mandrillus_leucophaeus
ENSXMAG00000014176	cnot3b	100	83.102	ENSMAMG00000019357	cnot3b	100	82.567	Mastacembelus_armatus
ENSXMAG00000014176	cnot3b	100	81.055	ENSMZEG00005002466	cnot3b	100	80.666	Maylandia_zebra
ENSXMAG00000014176	cnot3b	85	74.619	ENSMAUG00000014996	Cnot3	85	89.508	Mesocricetus_auratus
ENSXMAG00000014176	cnot3b	70	85.276	ENSMICG00000002370	CNOT3	84	89.474	Microcebus_murinus
ENSXMAG00000014176	cnot3b	51	61.229	ENSMMOG00000016446	cnot3a	100	63.080	Mola_mola
ENSXMAG00000014176	cnot3b	70	89.744	ENSMMOG00000013086	cnot3b	98	91.892	Mola_mola
ENSXMAG00000014176	cnot3b	60	89.474	ENSMODG00000004066	CNOT3	76	89.180	Monodelphis_domestica
ENSXMAG00000014176	cnot3b	100	63.386	ENSMALG00000009204	cnot3a	100	64.550	Monopterus_albus
ENSXMAG00000014176	cnot3b	71	89.565	ENSMALG00000004936	cnot3b	100	79.926	Monopterus_albus
ENSXMAG00000014176	cnot3b	79	74.680	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSXMAG00000014176	cnot3b	79	74.680	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSXMAG00000014176	cnot3b	79	74.680	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSXMAG00000014176	cnot3b	79	74.680	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSXMAG00000014176	cnot3b	82	75.773	ENSMPUG00000010352	CNOT3	85	89.180	Mustela_putorius_furo
ENSXMAG00000014176	cnot3b	75	73.604	ENSNGAG00000013266	Cnot3	85	89.180	Nannospalax_galili
ENSXMAG00000014176	cnot3b	69	92.694	ENSNBRG00000003336	cnot3b	97	89.720	Neolamprologus_brichardi
ENSXMAG00000014176	cnot3b	75	73.858	ENSNLEG00000006272	CNOT3	84	89.180	Nomascus_leucogenys
ENSXMAG00000014176	cnot3b	86	75.835	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSXMAG00000014176	cnot3b	100	63.528	ENSONIG00000006568	cnot3a	100	66.093	Oreochromis_niloticus
ENSXMAG00000014176	cnot3b	100	81.789	ENSONIG00000007047	cnot3b	100	80.517	Oreochromis_niloticus
ENSXMAG00000014176	cnot3b	85	74.619	ENSOCUG00000007691	CNOT3	85	89.180	Oryctolagus_cuniculus
ENSXMAG00000014176	cnot3b	100	81.670	ENSORLG00000005982	cnot3b	100	81.630	Oryzias_latipes
ENSXMAG00000014176	cnot3b	100	81.779	ENSORLG00020005779	cnot3b	100	81.650	Oryzias_latipes_hni
ENSXMAG00000014176	cnot3b	100	81.210	ENSORLG00015019021	cnot3b	100	81.297	Oryzias_latipes_hsok
ENSXMAG00000014176	cnot3b	100	82.372	ENSOMEG00000015557	cnot3b	100	81.630	Oryzias_melastigma
ENSXMAG00000014176	cnot3b	93	80.753	ENSOMEG00000010309	cnot3a	100	63.741	Oryzias_melastigma
ENSXMAG00000014176	cnot3b	77	74.747	ENSOGAG00000006945	CNOT3	84	89.474	Otolemur_garnettii
ENSXMAG00000014176	cnot3b	63	65.260	ENSOARG00000002981	CNOT3	69	83.732	Ovis_aries
ENSXMAG00000014176	cnot3b	75	73.858	ENSPPAG00000002748	CNOT3	85	89.180	Pan_paniscus
ENSXMAG00000014176	cnot3b	81	76.031	ENSPPRG00000011705	CNOT3	85	89.180	Panthera_pardus
ENSXMAG00000014176	cnot3b	62	89.597	ENSPTIG00000008781	CNOT3	96	89.597	Panthera_tigris_altaica
ENSXMAG00000014176	cnot3b	75	73.858	ENSPTRG00000046717	-	85	89.180	Pan_troglodytes
ENSXMAG00000014176	cnot3b	75	73.858	ENSPTRG00000011444	CNOT3	85	89.180	Pan_troglodytes
ENSXMAG00000014176	cnot3b	75	73.858	ENSPANG00000009375	CNOT3	85	89.180	Papio_anubis
ENSXMAG00000014176	cnot3b	68	93.162	ENSPKIG00000015967	-	91	95.495	Paramormyrops_kingsleyae
ENSXMAG00000014176	cnot3b	100	63.854	ENSPKIG00000011733	CNOT3	100	62.978	Paramormyrops_kingsleyae
ENSXMAG00000014176	cnot3b	98	67.939	ENSPMGG00000022539	cnot3b	99	67.432	Periophthalmus_magnuspinnatus
ENSXMAG00000014176	cnot3b	85	74.365	ENSPEMG00000024185	Cnot3	85	89.508	Peromyscus_maniculatus_bairdii
ENSXMAG00000014176	cnot3b	68	89.803	ENSPCIG00000023018	CNOT3	90	89.508	Phascolarctos_cinereus
ENSXMAG00000014176	cnot3b	75	86.093	ENSPFOG00000008693	cnot3a	86	84.295	Poecilia_formosa
ENSXMAG00000014176	cnot3b	100	98.015	ENSPFOG00000007168	cnot3b	100	98.015	Poecilia_formosa
ENSXMAG00000014176	cnot3b	100	98.015	ENSPLAG00000013457	cnot3b	100	98.015	Poecilia_latipinna
ENSXMAG00000014176	cnot3b	100	98.126	ENSPMEG00000010184	cnot3b	100	98.126	Poecilia_mexicana
ENSXMAG00000014176	cnot3b	99	92.506	ENSPREG00000000662	cnot3b	97	92.058	Poecilia_reticulata
ENSXMAG00000014176	cnot3b	68	86.290	ENSPREG00000007592	cnot3a	91	86.290	Poecilia_reticulata
ENSXMAG00000014176	cnot3b	51	94.577	ENSPREG00000000766	-	100	93.926	Poecilia_reticulata
ENSXMAG00000014176	cnot3b	75	73.604	ENSPPYG00000010372	CNOT3	85	88.852	Pongo_abelii
ENSXMAG00000014176	cnot3b	54	95.763	ENSPCAG00000011999	CNOT3	56	95.763	Procavia_capensis
ENSXMAG00000014176	cnot3b	75	74.619	ENSPCOG00000017673	CNOT3	84	89.474	Propithecus_coquereli
ENSXMAG00000014176	cnot3b	82	72.277	ENSPVAG00000015564	CNOT3	85	88.525	Pteropus_vampyrus
ENSXMAG00000014176	cnot3b	99	72.276	ENSPNYG00000003358	cnot3b	99	71.121	Pundamilia_nyererei
ENSXMAG00000014176	cnot3b	100	70.824	ENSPNAG00000027459	cnot3b	100	70.311	Pygocentrus_nattereri
ENSXMAG00000014176	cnot3b	75	80.986	ENSPNAG00000017679	cnot3a	100	65.919	Pygocentrus_nattereri
ENSXMAG00000014176	cnot3b	79	74.680	ENSRNOG00000053234	Cnot3	85	89.508	Rattus_norvegicus
ENSXMAG00000014176	cnot3b	79	74.365	ENSRBIG00000031025	CNOT3	85	89.180	Rhinopithecus_bieti
ENSXMAG00000014176	cnot3b	79	74.619	ENSRROG00000003872	CNOT3	85	89.180	Rhinopithecus_roxellana
ENSXMAG00000014176	cnot3b	75	74.365	ENSSBOG00000030268	CNOT3	85	89.180	Saimiri_boliviensis_boliviensis
ENSXMAG00000014176	cnot3b	100	68.506	ENSSFOG00015019203	-	100	67.979	Scleropages_formosus
ENSXMAG00000014176	cnot3b	100	69.412	ENSSFOG00015000248	cnot3	100	69.762	Scleropages_formosus
ENSXMAG00000014176	cnot3b	100	79.915	ENSSMAG00000016031	cnot3b	100	79.406	Scophthalmus_maximus
ENSXMAG00000014176	cnot3b	81	89.744	ENSSDUG00000008181	cnot3a	85	91.892	Seriola_dumerili
ENSXMAG00000014176	cnot3b	100	82.623	ENSSDUG00000003428	cnot3b	100	83.369	Seriola_dumerili
ENSXMAG00000014176	cnot3b	100	82.623	ENSSLDG00000014376	cnot3b	100	83.369	Seriola_lalandi_dorsalis
ENSXMAG00000014176	cnot3b	77	75.315	ENSSPUG00000008510	CNOT3	89	89.836	Sphenodon_punctatus
ENSXMAG00000014176	cnot3b	100	83.601	ENSSPAG00000001429	cnot3b	100	84.780	Stegastes_partitus
ENSXMAG00000014176	cnot3b	63	86.220	ENSSPAG00000003858	cnot3a	92	86.220	Stegastes_partitus
ENSXMAG00000014176	cnot3b	75	74.112	ENSSSCG00000003264	CNOT3	84	89.180	Sus_scrofa
ENSXMAG00000014176	cnot3b	94	74.171	ENSTNIG00000005663	cnot3b	100	74.397	Tetraodon_nigroviridis
ENSXMAG00000014176	cnot3b	69	89.145	ENSUAMG00000005234	CNOT3	85	88.852	Ursus_americanus
ENSXMAG00000014176	cnot3b	70	87.455	ENSUMAG00000010934	CNOT3	94	87.402	Ursus_maritimus
ENSXMAG00000014176	cnot3b	76	73.858	ENSVVUG00000008239	CNOT3	84	89.180	Vulpes_vulpes
ENSXMAG00000014176	cnot3b	100	59.979	ENSXETG00000003166	cnot3	88	88.350	Xenopus_tropicalis
ENSXMAG00000014176	cnot3b	96	94.743	ENSXCOG00000018976	cnot3b	99	94.743	Xiphophorus_couchianus
ENSXMAG00000014176	cnot3b	100	61.342	ENSXCOG00000019460	cnot3a	85	91.441	Xiphophorus_couchianus
ENSXMAG00000014176	cnot3b	100	63.265	ENSXMAG00000012273	cnot3a	100	64.021	Xiphophorus_maculatus