EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014213 (Gene tree)
Gene ID: 102216849
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 1908 bases
Position: chr3:15823399-15825306
Accession: 102216849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000022452	RRM_1	PF00076.22	5e-36	1	3
ENSXMAP00000022452	RRM_1	PF00076.22	5e-36	2	3
ENSXMAP00000022452	RRM_1	PF00076.22	5e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000014248	-	1908	XM_005804690	ENSXMAP00000022452	635 (aa)	XP_005804747	UPI0003B5DEF7

Gene Model

Click here to download ENSXMAG00000014213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014213	rbm12b	89	44.898	ENSG00000183808	RBM12B	98	77.500	Homo_sapiens
ENSXMAG00000014213	rbm12b	100	64.521	ENSAPOG00000013963	rbm12b	100	64.521	Acanthochromis_polyacanthus
ENSXMAG00000014213	rbm12b	72	31.983	ENSAPOG00000008836	zgc:153215	95	31.557	Acanthochromis_polyacanthus
ENSXMAG00000014213	rbm12b	92	41.667	ENSAMEG00000007134	RBM12B	70	41.667	Ailuropoda_melanoleuca
ENSXMAG00000014213	rbm12b	93	65.333	ENSACIG00000014943	rbm12b	97	65.333	Amphilophus_citrinellus
ENSXMAG00000014213	rbm12b	74	31.200	ENSAOCG00000010819	zgc:153215	99	30.478	Amphiprion_ocellaris
ENSXMAG00000014213	rbm12b	100	65.934	ENSAOCG00000024270	rbm12b	100	65.934	Amphiprion_ocellaris
ENSXMAG00000014213	rbm12b	98	41.616	ENSAPEG00000022079	rbm12b	99	61.967	Amphiprion_percula
ENSXMAG00000014213	rbm12b	100	61.950	ENSATEG00000004578	rbm12b	97	61.635	Anabas_testudineus
ENSXMAG00000014213	rbm12b	74	51.852	ENSATEG00000001886	zgc:153215	78	49.438	Anabas_testudineus
ENSXMAG00000014213	rbm12b	100	37.784	ENSAPLG00000002020	RBM12B	89	71.429	Anas_platyrhynchos
ENSXMAG00000014213	rbm12b	90	42.424	ENSACAG00000003463	RBM12B	59	42.424	Anolis_carolinensis
ENSXMAG00000014213	rbm12b	89	44.898	ENSANAG00000034015	RBM12B	69	44.898	Aotus_nancymaae
ENSXMAG00000014213	rbm12b	100	65.149	ENSACLG00000005575	rbm12b	98	65.149	Astatotilapia_calliptera
ENSXMAG00000014213	rbm12b	100	54.103	ENSACLG00000005578	rbm12b	100	54.103	Astatotilapia_calliptera
ENSXMAG00000014213	rbm12b	100	45.652	ENSAMXG00000041973	rbm12b	100	46.390	Astyanax_mexicanus
ENSXMAG00000014213	rbm12b	74	53.933	ENSAMXG00000020853	zgc:153215	75	45.133	Astyanax_mexicanus
ENSXMAG00000014213	rbm12b	90	44.554	ENSBTAG00000013408	RBM12B	68	44.554	Bos_taurus
ENSXMAG00000014213	rbm12b	92	41.870	ENSCAFG00000009109	RBM12B	60	40.833	Canis_familiaris
ENSXMAG00000014213	rbm12b	92	41.870	ENSCAFG00020012203	RBM12B	68	40.833	Canis_lupus_dingo
ENSXMAG00000014213	rbm12b	75	41.093	ENSCHIG00000006790	RBM12B	68	40.365	Capra_hircus
ENSXMAG00000014213	rbm12b	89	43.878	ENSTSYG00000012515	RBM12B	59	43.878	Carlito_syrichta
ENSXMAG00000014213	rbm12b	90	45.545	ENSCAPG00000003543	RBM12B	62	45.545	Cavia_aperea
ENSXMAG00000014213	rbm12b	90	45.545	ENSCPOG00000007815	RBM12B	62	45.545	Cavia_porcellus
ENSXMAG00000014213	rbm12b	89	44.898	ENSCATG00000030769	RBM12B	68	44.898	Cercocebus_atys
ENSXMAG00000014213	rbm12b	90	45.545	ENSCLAG00000017617	RBM12B	62	45.545	Chinchilla_lanigera
ENSXMAG00000014213	rbm12b	89	44.898	ENSCSAG00000018559	RBM12B	58	44.898	Chlorocebus_sabaeus
ENSXMAG00000014213	rbm12b	87	41.379	ENSCHOG00000008934	RBM12B	60	41.379	Choloepus_hoffmanni
ENSXMAG00000014213	rbm12b	100	38.231	ENSCPBG00000003061	RBM12B	100	37.429	Chrysemys_picta_bellii
ENSXMAG00000014213	rbm12b	89	44.898	ENSCANG00000030379	RBM12B	67	44.898	Colobus_angolensis_palliatus
ENSXMAG00000014213	rbm12b	86	49.351	ENSCGRG00001008710	-	65	49.351	Cricetulus_griseus_chok1gshd
ENSXMAG00000014213	rbm12b	73	30.663	ENSCSEG00000001575	-	99	31.319	Cynoglossus_semilaevis
ENSXMAG00000014213	rbm12b	100	57.943	ENSCSEG00000004610	rbm12b	97	57.943	Cynoglossus_semilaevis
ENSXMAG00000014213	rbm12b	100	38.182	ENSCVAG00000009259	-	99	38.073	Cyprinodon_variegatus
ENSXMAG00000014213	rbm12b	100	75.039	ENSCVAG00000011047	rbm12b	100	75.039	Cyprinodon_variegatus
ENSXMAG00000014213	rbm12b	100	43.441	ENSDARG00000079717	rbm12b	100	43.601	Danio_rerio
ENSXMAG00000014213	rbm12b	92	41.667	ENSDNOG00000041608	RBM12B	59	41.667	Dasypus_novemcinctus
ENSXMAG00000014213	rbm12b	89	45.545	ENSDORG00000024034	-	62	45.545	Dipodomys_ordii
ENSXMAG00000014213	rbm12b	75	40.771	ENSETEG00000013005	-	66	40.530	Echinops_telfairi
ENSXMAG00000014213	rbm12b	89	44.554	ENSEASG00005016297	RBM12B	67	44.554	Equus_asinus_asinus
ENSXMAG00000014213	rbm12b	89	44.554	ENSECAG00000017870	RBM12B	60	44.554	Equus_caballus
ENSXMAG00000014213	rbm12b	92	41.837	ENSFCAG00000029274	RBM12B	69	40.833	Felis_catus
ENSXMAG00000014213	rbm12b	100	37.187	ENSFALG00000014893	RBM12B	100	37.378	Ficedula_albicollis
ENSXMAG00000014213	rbm12b	90	45.545	ENSFDAG00000005576	RBM12B	61	45.545	Fukomys_damarensis
ENSXMAG00000014213	rbm12b	100	77.031	ENSFHEG00000016425	rbm12b	100	77.031	Fundulus_heteroclitus
ENSXMAG00000014213	rbm12b	99	52.269	ENSGMOG00000013467	rbm12b	100	52.269	Gadus_morhua
ENSXMAG00000014213	rbm12b	100	97.008	ENSGAFG00000007224	rbm12b	100	97.008	Gambusia_affinis
ENSXMAG00000014213	rbm12b	100	61.957	ENSGACG00000008682	rbm12b	99	60.870	Gasterosteus_aculeatus
ENSXMAG00000014213	rbm12b	100	38.889	ENSGAGG00000009774	RBM12B	100	37.660	Gopherus_agassizii
ENSXMAG00000014213	rbm12b	89	43.878	ENSGGOG00000011909	RBM12B	66	43.878	Gorilla_gorilla
ENSXMAG00000014213	rbm12b	100	63.359	ENSHBUG00000016227	rbm12b	100	63.359	Haplochromis_burtoni
ENSXMAG00000014213	rbm12b	90	45.545	ENSHGLG00000009063	RBM12B	62	45.545	Heterocephalus_glaber_female
ENSXMAG00000014213	rbm12b	90	45.545	ENSHGLG00100021324	RBM12B	62	45.545	Heterocephalus_glaber_male
ENSXMAG00000014213	rbm12b	100	52.821	ENSHCOG00000014952	rbm12b	100	52.821	Hippocampus_comes
ENSXMAG00000014213	rbm12b	100	46.423	ENSIPUG00000001167	RBM12B	97	46.119	Ictalurus_punctatus
ENSXMAG00000014213	rbm12b	74	30.697	ENSIPUG00000019731	zgc:153215	79	52.874	Ictalurus_punctatus
ENSXMAG00000014213	rbm12b	89	44.554	ENSSTOG00000027445	RBM12B	70	44.554	Ictidomys_tridecemlineatus
ENSXMAG00000014213	rbm12b	95	44.554	ENSJJAG00000004165	-	71	44.554	Jaculus_jaculus
ENSXMAG00000014213	rbm12b	100	63.108	ENSKMAG00000013704	rbm12b	97	63.108	Kryptolebias_marmoratus
ENSXMAG00000014213	rbm12b	74	30.435	ENSKMAG00000004958	zgc:153215	99	30.417	Kryptolebias_marmoratus
ENSXMAG00000014213	rbm12b	100	63.422	ENSKMAG00000013715	rbm12b	100	63.422	Kryptolebias_marmoratus
ENSXMAG00000014213	rbm12b	74	31.663	ENSLBEG00000002597	zgc:153215	99	30.799	Labrus_bergylta
ENSXMAG00000014213	rbm12b	100	38.218	ENSLACG00000007177	RBM12B	100	38.506	Latimeria_chalumnae
ENSXMAG00000014213	rbm12b	100	47.007	ENSLOCG00000018344	rbm12b	100	46.999	Lepisosteus_oculatus
ENSXMAG00000014213	rbm12b	89	43.564	ENSLAFG00000029949	RBM12B	69	43.564	Loxodonta_africana
ENSXMAG00000014213	rbm12b	89	44.898	ENSMFAG00000045430	RBM12B	67	44.898	Macaca_fascicularis
ENSXMAG00000014213	rbm12b	89	44.898	ENSMMUG00000005558	RBM12B	66	44.898	Macaca_mulatta
ENSXMAG00000014213	rbm12b	89	44.898	ENSMNEG00000041292	RBM12B	67	44.898	Macaca_nemestrina
ENSXMAG00000014213	rbm12b	89	44.898	ENSMLEG00000037288	RBM12B	66	44.898	Mandrillus_leucophaeus
ENSXMAG00000014213	rbm12b	100	64.890	ENSMAMG00000011998	rbm12b	100	64.107	Mastacembelus_armatus
ENSXMAG00000014213	rbm12b	100	64.992	ENSMZEG00005015005	rbm12b	100	64.992	Maylandia_zebra
ENSXMAG00000014213	rbm12b	100	62.480	ENSMZEG00005014845	rbm12b	99	62.145	Maylandia_zebra
ENSXMAG00000014213	rbm12b	86	49.351	ENSMAUG00000021752	-	67	49.351	Mesocricetus_auratus
ENSXMAG00000014213	rbm12b	88	46.237	ENSMICG00000036969	RBM12B	68	46.237	Microcebus_murinus
ENSXMAG00000014213	rbm12b	89	43.617	ENSMOCG00000005603	-	68	43.617	Microtus_ochrogaster
ENSXMAG00000014213	rbm12b	99	59.748	ENSMMOG00000002404	rbm12b	94	59.748	Mola_mola
ENSXMAG00000014213	rbm12b	88	44.086	ENSMODG00000007436	RBM12B	77	44.086	Monodelphis_domestica
ENSXMAG00000014213	rbm12b	100	58.100	ENSMALG00000012059	rbm12b	100	58.255	Monopterus_albus
ENSXMAG00000014213	rbm12b	74	32.150	ENSMALG00000001222	zgc:153215	98	32.172	Monopterus_albus
ENSXMAG00000014213	rbm12b	86	46.667	ENSMUSG00000052137	Rbm12b2	67	46.667	Mus_musculus
ENSXMAG00000014213	rbm12b	86	48.000	ENSMUSG00000046667	Rbm12b1	68	48.000	Mus_musculus
ENSXMAG00000014213	rbm12b	89	40.816	MGP_SPRETEiJ_G0026766	-	70	40.816	Mus_spretus
ENSXMAG00000014213	rbm12b	89	40.816	MGP_SPRETEiJ_G0026765	-	64	40.816	Mus_spretus
ENSXMAG00000014213	rbm12b	92	41.667	ENSMPUG00000018637	RBM12B	59	41.667	Mustela_putorius_furo
ENSXMAG00000014213	rbm12b	92	41.667	ENSMLUG00000002359	RBM12B	63	41.667	Myotis_lucifugus
ENSXMAG00000014213	rbm12b	100	40.164	ENSNGAG00000002801	-	71	40.246	Nannospalax_galili
ENSXMAG00000014213	rbm12b	100	65.620	ENSNBRG00000015057	rbm12b	100	65.620	Neolamprologus_brichardi
ENSXMAG00000014213	rbm12b	89	44.898	ENSNLEG00000032050	RBM12B	66	44.898	Nomascus_leucogenys
ENSXMAG00000014213	rbm12b	93	43.333	ENSODEG00000019204	RBM12B	63	43.333	Octodon_degus
ENSXMAG00000014213	rbm12b	100	65.934	ENSONIG00000020612	rbm12b	100	65.934	Oreochromis_niloticus
ENSXMAG00000014213	rbm12b	100	37.787	ENSOANG00000015735	-	97	37.644	Ornithorhynchus_anatinus
ENSXMAG00000014213	rbm12b	92	42.500	ENSOCUG00000010353	RBM12B	69	42.500	Oryctolagus_cuniculus
ENSXMAG00000014213	rbm12b	100	64.219	ENSORLG00000008228	rbm12b	97	64.219	Oryzias_latipes
ENSXMAG00000014213	rbm12b	100	64.688	ENSORLG00020013619	rbm12b	97	64.688	Oryzias_latipes_hni
ENSXMAG00000014213	rbm12b	100	64.531	ENSORLG00015019999	rbm12b	97	64.531	Oryzias_latipes_hsok
ENSXMAG00000014213	rbm12b	75	30.625	ENSOMEG00000004220	zgc:153215	98	30.561	Oryzias_melastigma
ENSXMAG00000014213	rbm12b	100	65.625	ENSOMEG00000022523	rbm12b	97	65.625	Oryzias_melastigma
ENSXMAG00000014213	rbm12b	89	43.878	ENSOGAG00000002979	RBM12B	59	43.878	Otolemur_garnettii
ENSXMAG00000014213	rbm12b	92	41.870	ENSPTIG00000020071	RBM12B	69	40.833	Panthera_tigris_altaica
ENSXMAG00000014213	rbm12b	92	41.667	ENSPTRG00000020420	RBM12B	68	41.667	Pan_troglodytes
ENSXMAG00000014213	rbm12b	89	44.898	ENSPANG00000035535	RBM12B	66	44.898	Papio_anubis
ENSXMAG00000014213	rbm12b	100	49.025	ENSPKIG00000018719	rbm12b	99	48.126	Paramormyrops_kingsleyae
ENSXMAG00000014213	rbm12b	77	33.006	ENSPKIG00000014851	zgc:153215	79	58.442	Paramormyrops_kingsleyae
ENSXMAG00000014213	rbm12b	100	38.714	ENSPSIG00000001348	RBM12B	100	38.286	Pelodiscus_sinensis
ENSXMAG00000014213	rbm12b	88	46.237	ENSPEMG00000008279	-	68	46.237	Peromyscus_maniculatus_bairdii
ENSXMAG00000014213	rbm12b	89	42.829	ENSPCIG00000008556	RBM12B	77	45.455	Phascolarctos_cinereus
ENSXMAG00000014213	rbm12b	100	93.228	ENSPFOG00000020937	rbm12b	97	93.228	Poecilia_formosa
ENSXMAG00000014213	rbm12b	74	42.623	ENSPFOG00000017451	zgc:153215	66	51.163	Poecilia_formosa
ENSXMAG00000014213	rbm12b	100	95.748	ENSPLAG00000018782	rbm12b	100	95.748	Poecilia_latipinna
ENSXMAG00000014213	rbm12b	100	95.591	ENSPMEG00000011418	rbm12b	100	95.591	Poecilia_mexicana
ENSXMAG00000014213	rbm12b	100	96.220	ENSPREG00000020770	rbm12b	100	96.220	Poecilia_reticulata
ENSXMAG00000014213	rbm12b	89	44.898	ENSPPYG00000018745	RBM12B	58	44.898	Pongo_abelii
ENSXMAG00000014213	rbm12b	89	43.878	ENSPCOG00000023546	RBM12B	67	43.878	Propithecus_coquereli
ENSXMAG00000014213	rbm12b	89	44.554	ENSPVAG00000011803	RBM12B	63	44.554	Pteropus_vampyrus
ENSXMAG00000014213	rbm12b	100	65.149	ENSPNYG00000016696	rbm12b	100	65.149	Pundamilia_nyererei
ENSXMAG00000014213	rbm12b	100	45.672	ENSPNAG00000008126	rbm12b	97	46.767	Pygocentrus_nattereri
ENSXMAG00000014213	rbm12b	67	51.685	ENSPNAG00000025628	zgc:153215	77	51.685	Pygocentrus_nattereri
ENSXMAG00000014213	rbm12b	87	45.122	ENSRNOG00000016330	Rbm12b	67	45.122	Rattus_norvegicus
ENSXMAG00000014213	rbm12b	74	40.447	ENSRNOG00000055292	LOC679087	65	40.244	Rattus_norvegicus
ENSXMAG00000014213	rbm12b	89	44.898	ENSRBIG00000035046	RBM12B	66	44.898	Rhinopithecus_bieti
ENSXMAG00000014213	rbm12b	89	44.898	ENSRROG00000023660	RBM12B	69	44.898	Rhinopithecus_roxellana
ENSXMAG00000014213	rbm12b	86	48.052	ENSSBOG00000027592	RBM12B	63	48.052	Saimiri_boliviensis_boliviensis
ENSXMAG00000014213	rbm12b	89	42.744	ENSSHAG00000015335	RBM12B	77	45.455	Sarcophilus_harrisii
ENSXMAG00000014213	rbm12b	74	33.068	ENSSFOG00015009427	zgc:153215	99	33.068	Scleropages_formosus
ENSXMAG00000014213	rbm12b	100	46.954	ENSSFOG00015001584	rbm12b	100	46.875	Scleropages_formosus
ENSXMAG00000014213	rbm12b	100	62.637	ENSSMAG00000019708	rbm12b	100	62.637	Scophthalmus_maximus
ENSXMAG00000014213	rbm12b	75	31.189	ENSSMAG00000019013	zgc:153215	98	30.375	Scophthalmus_maximus
ENSXMAG00000014213	rbm12b	100	63.969	ENSSDUG00000006856	rbm12b	100	63.969	Seriola_dumerili
ENSXMAG00000014213	rbm12b	74	30.400	ENSSDUG00000012545	zgc:153215	98	30.039	Seriola_dumerili
ENSXMAG00000014213	rbm12b	100	64.275	ENSSLDG00000016156	rbm12b	100	64.275	Seriola_lalandi_dorsalis
ENSXMAG00000014213	rbm12b	74	53.086	ENSSLDG00000013581	zgc:153215	81	43.363	Seriola_lalandi_dorsalis
ENSXMAG00000014213	rbm12b	75	42.209	ENSSARG00000011845	-	70	41.153	Sorex_araneus
ENSXMAG00000014213	rbm12b	76	40.381	ENSSPUG00000016954	RBM12B	92	40.000	Sphenodon_punctatus
ENSXMAG00000014213	rbm12b	100	65.620	ENSSPAG00000006774	rbm12b	100	65.620	Stegastes_partitus
ENSXMAG00000014213	rbm12b	74	32.218	ENSSPAG00000023584	zgc:153215	98	31.524	Stegastes_partitus
ENSXMAG00000014213	rbm12b	92	41.046	ENSSSCG00000006110	RBM12B	60	40.452	Sus_scrofa
ENSXMAG00000014213	rbm12b	74	39.841	ENSTGUG00000011860	RBM12B	95	39.800	Taeniopygia_guttata
ENSXMAG00000014213	rbm12b	100	56.515	ENSTRUG00000013738	rbm12b	100	56.515	Takifugu_rubripes
ENSXMAG00000014213	rbm12b	55	31.266	ENSTNIG00000018374	-	98	30.491	Tetraodon_nigroviridis
ENSXMAG00000014213	rbm12b	75	41.118	ENSTBEG00000000449	RBM12B	63	40.200	Tupaia_belangeri
ENSXMAG00000014213	rbm12b	92	42.500	ENSUAMG00000023639	RBM12B	67	42.500	Ursus_americanus
ENSXMAG00000014213	rbm12b	92	42.500	ENSUMAG00000016008	RBM12B	65	42.500	Ursus_maritimus
ENSXMAG00000014213	rbm12b	74	47.423	ENSVPAG00000001080	RBM12B	50	47.423	Vicugna_pacos
ENSXMAG00000014213	rbm12b	92	42.073	ENSVVUG00000002694	RBM12B	68	40.984	Vulpes_vulpes
ENSXMAG00000014213	rbm12b	97	33.902	ENSXETG00000014696	rbm12b	67	33.902	Xenopus_tropicalis
ENSXMAG00000014213	rbm12b	100	36.735	ENSXETG00000014694	rbm12b	99	39.085	Xenopus_tropicalis