EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXMAG00000014270 (Gene tree)
Gene ID
102217612
Gene Symbol
atxn1b
Alias
atxn1|atxn1a
Full Name
ataxin-1-like
Gene Type
protein_coding
Species
Xiphophorus_maculatus
Status
putative
Strand
Plus strand
Length
11450 bases
Position
chr3:15873656-15885105
Accession
102217612
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXMAP00000039782AXHPF08517.126.7e-4111
ENSXMAP00000041011AXHPF08517.126.7e-4111
ENSXMAP00000014288AXHPF08517.121.2e-4011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXMAT00000027937-3119XM_014470853ENSXMAP00000041011825 (aa)XP_014326339UPI0006D92B37
ENSXMAT00000037775-2846XM_023330825ENSXMAP00000039782825 (aa)XP_023186593UPI0006D92B37
ENSXMAT00000014308-2010-ENSXMAP00000014288669 (aa)-M4AIJ4
Gene Model
Click here to download ENSXMAG00000014270's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014270's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXMAG00000014270atxn1b9938.286ENSG00000124788ATXN19938.517Homo_sapiens
ENSXMAG00000014270atxn1b10082.254ENSAPOG00000005003atxn1b10081.415Acanthochromis_polyacanthus
ENSXMAG00000014270atxn1b9377.778ENSAPOG00000018662atxn1a8877.778Acanthochromis_polyacanthus
ENSXMAG00000014270atxn1b9839.364ENSAMEG00000004299ATXN19938.631Ailuropoda_melanoleuca
ENSXMAG00000014270atxn1b8478.125ENSACIG00000016088atxn1a9937.970Amphilophus_citrinellus
ENSXMAG00000014270atxn1b10081.609ENSACIG00000014661atxn1b10080.603Amphilophus_citrinellus
ENSXMAG00000014270atxn1b9377.778ENSAOCG00000015796atxn1a8877.778Amphiprion_ocellaris
ENSXMAG00000014270atxn1b10082.572ENSAOCG00000019715atxn1b10081.731Amphiprion_ocellaris
ENSXMAG00000014270atxn1b10082.452ENSAPEG00000022436atxn1b10081.611Amphiprion_percula
ENSXMAG00000014270atxn1b9377.778ENSAPEG00000011313atxn1a8877.778Amphiprion_percula
ENSXMAG00000014270atxn1b9941.055ENSATEG00000013601atxn1a9940.575Anabas_testudineus
ENSXMAG00000014270atxn1b10080.072ENSATEG00000002982atxn1b10079.472Anabas_testudineus
ENSXMAG00000014270atxn1b9938.549ENSACAG00000003919ATXN19937.855Anolis_carolinensis
ENSXMAG00000014270atxn1b8137.368ENSANAG00000025424-9637.234Aotus_nancymaae
ENSXMAG00000014270atxn1b9839.268ENSANAG00000025206-9539.216Aotus_nancymaae
ENSXMAG00000014270atxn1b9375.556ENSACLG00000015429atxn1a8875.556Astatotilapia_calliptera
ENSXMAG00000014270atxn1b10081.393ENSACLG00000005697atxn1b10080.432Astatotilapia_calliptera
ENSXMAG00000014270atxn1b9854.231ENSAMXG00000017432atxn1b6954.762Astyanax_mexicanus
ENSXMAG00000014270atxn1b9941.387ENSAMXG00000042368atxn1a9943.072Astyanax_mexicanus
ENSXMAG00000014270atxn1b9937.527ENSBTAG00000019675ATXN19247.750Bos_taurus
ENSXMAG00000014270atxn1b9839.342ENSCJAG00000006563ATXN19339.290Callithrix_jacchus
ENSXMAG00000014270atxn1b9938.883ENSCAFG00000009934ATXN19247.870Canis_familiaris
ENSXMAG00000014270atxn1b9838.829ENSCAFG00020012647ATXN18747.859Canis_lupus_dingo
ENSXMAG00000014270atxn1b9937.041ENSCHIG00000018697ATXN19247.750Capra_hircus
ENSXMAG00000014270atxn1b6554.286ENSTSYG00000000858ATXN19754.839Carlito_syrichta
ENSXMAG00000014270atxn1b9940.290ENSCAPG00000013095ATXN19939.829Cavia_aperea
ENSXMAG00000014270atxn1b9940.695ENSCPOG00000022869ATXN19940.221Cavia_porcellus
ENSXMAG00000014270atxn1b9938.606ENSCCAG00000018590ATXN19939.242Cebus_capucinus
ENSXMAG00000014270atxn1b9938.258ENSCATG00000042777ATXN19938.855Cercocebus_atys
ENSXMAG00000014270atxn1b9939.933ENSCLAG00000002212ATXN19939.975Chinchilla_lanigera
ENSXMAG00000014270atxn1b9938.343ENSCSAG00000007589ATXN19938.950Chlorocebus_sabaeus
ENSXMAG00000014270atxn1b9938.358ENSCPBG00000022373ATXN19248.101Chrysemys_picta_bellii
ENSXMAG00000014270atxn1b9938.402ENSCANG00000033673ATXN19939.018Colobus_angolensis_palliatus
ENSXMAG00000014270atxn1b9939.535ENSCGRG00001022108Atxn19939.266Cricetulus_griseus_chok1gshd
ENSXMAG00000014270atxn1b9939.888ENSCGRG00000014084Atxn19939.618Cricetulus_griseus_crigri
ENSXMAG00000014270atxn1b9843.823ENSCSEG00000017647atxn1a9935.246Cynoglossus_semilaevis
ENSXMAG00000014270atxn1b10074.910ENSCSEG00000004666atxn1b10074.430Cynoglossus_semilaevis
ENSXMAG00000014270atxn1b10088.448ENSCVAG00000010945atxn1b10087.485Cyprinodon_variegatus
ENSXMAG00000014270atxn1b9938.426ENSCVAG00000023240atxn1a9937.884Cyprinodon_variegatus
ENSXMAG00000014270atxn1b9942.053ENSDARG00000060862atxn1b9250.562Danio_rerio
ENSXMAG00000014270atxn1b9938.901ENSDARG00000061687atxn1a9940.136Danio_rerio
ENSXMAG00000014270atxn1b5845.984ENSDNOG00000048471ATXN19149.231Dasypus_novemcinctus
ENSXMAG00000014270atxn1b9937.984ENSDORG00000005940Atxn19938.344Dipodomys_ordii
ENSXMAG00000014270atxn1b8443.195ENSETEG00000003815ATXN18645.198Echinops_telfairi
ENSXMAG00000014270atxn1b9939.038ENSEASG00005011799ATXN19939.262Equus_asinus_asinus
ENSXMAG00000014270atxn1b9939.062ENSECAG00000009251ATXN19939.262Equus_caballus
ENSXMAG00000014270atxn1b9938.735ENSEEUG00000007120ATXN19938.901Erinaceus_europaeus
ENSXMAG00000014270atxn1b9468.889ENSELUG00000001311atxn1b8757.024Esox_lucius
ENSXMAG00000014270atxn1b9837.074ENSELUG00000003691atxn1a9637.134Esox_lucius
ENSXMAG00000014270atxn1b9938.298ENSFCAG00000011298ATXN19938.738Felis_catus
ENSXMAG00000014270atxn1b9939.709ENSFALG00000013400ATXN19249.114Ficedula_albicollis
ENSXMAG00000014270atxn1b9839.182ENSFDAG00000020905ATXN19939.470Fukomys_damarensis
ENSXMAG00000014270atxn1b10089.410ENSFHEG00000017226atxn1b10088.327Fundulus_heteroclitus
ENSXMAG00000014270atxn1b9370.833ENSFHEG00000019419atxn1a8870.833Fundulus_heteroclitus
ENSXMAG00000014270atxn1b9859.730ENSGMOG00000013508atxn1b9959.647Gadus_morhua
ENSXMAG00000014270atxn1b9940.200ENSGALG00000012709ATXN19248.861Gallus_gallus
ENSXMAG00000014270atxn1b9371.111ENSGAFG00000010544atxn1a9938.488Gambusia_affinis
ENSXMAG00000014270atxn1b10098.061ENSGAFG00000007295atxn1b10098.061Gambusia_affinis
ENSXMAG00000014270atxn1b9872.253ENSGACG00000008747atxn1b9971.429Gasterosteus_aculeatus
ENSXMAG00000014270atxn1b9938.353ENSGACG00000003472atxn1a9937.456Gasterosteus_aculeatus
ENSXMAG00000014270atxn1b9938.764ENSGAGG00000006868ATXN19248.101Gopherus_agassizii
ENSXMAG00000014270atxn1b9938.512ENSGGOG00000004169ATXN19938.768Gorilla_gorilla
ENSXMAG00000014270atxn1b10081.393ENSHBUG00000016081atxn1b10080.432Haplochromis_burtoni
ENSXMAG00000014270atxn1b9375.556ENSHBUG00000002508atxn1a8875.556Haplochromis_burtoni
ENSXMAG00000014270atxn1b9939.418ENSHGLG00000009360ATXN19940.397Heterocephalus_glaber_female
ENSXMAG00000014270atxn1b9939.418ENSHGLG00100003038ATXN19940.397Heterocephalus_glaber_male
ENSXMAG00000014270atxn1b9974.582ENSHCOG00000014835atxn1b9973.389Hippocampus_comes
ENSXMAG00000014270atxn1b8740.484ENSHCOG00000019032atxn1a9439.902Hippocampus_comes
ENSXMAG00000014270atxn1b9943.862ENSIPUG00000002088atxn1b9941.776Ictalurus_punctatus
ENSXMAG00000014270atxn1b9941.599ENSIPUG00000001402atxn19940.672Ictalurus_punctatus
ENSXMAG00000014270atxn1b9939.866ENSSTOG00000025423ATXN19940.517Ictidomys_tridecemlineatus
ENSXMAG00000014270atxn1b9939.394ENSJJAG00000000377Atxn19939.679Jaculus_jaculus
ENSXMAG00000014270atxn1b9982.082ENSKMAG00000013507atxn1b10080.872Kryptolebias_marmoratus
ENSXMAG00000014270atxn1b9559.016ENSKMAG00000007216atxn1a9939.977Kryptolebias_marmoratus
ENSXMAG00000014270atxn1b9837.590ENSLBEG00000024388atxn1a9940.433Labrus_bergylta
ENSXMAG00000014270atxn1b10076.464ENSLBEG00000024264atxn1b10075.747Labrus_bergylta
ENSXMAG00000014270atxn1b9939.864ENSLACG00000005371ATXN19246.465Latimeria_chalumnae
ENSXMAG00000014270atxn1b9945.704ENSLOCG00000002910atxn1a9945.172Lepisosteus_oculatus
ENSXMAG00000014270atxn1b9939.189ENSLAFG00000015231ATXN19938.910Loxodonta_africana
ENSXMAG00000014270atxn1b9938.721ENSMFAG00000032779ATXN19938.761Macaca_fascicularis
ENSXMAG00000014270atxn1b9938.504ENSMMUG00000002940ATXN19939.004Macaca_mulatta
ENSXMAG00000014270atxn1b9938.694ENSMNEG00000036667ATXN19938.733Macaca_nemestrina
ENSXMAG00000014270atxn1b7541.018ENSMLEG00000040480ATXN19739.938Mandrillus_leucophaeus
ENSXMAG00000014270atxn1b9373.333ENSMAMG00000014004atxn1a9939.840Mastacembelus_armatus
ENSXMAG00000014270atxn1b10079.570ENSMAMG00000011503atxn1b10079.570Mastacembelus_armatus
ENSXMAG00000014270atxn1b10081.273ENSMZEG00005015064atxn1b10080.312Maylandia_zebra
ENSXMAG00000014270atxn1b9375.556ENSMZEG00005003602atxn1a8875.556Maylandia_zebra
ENSXMAG00000014270atxn1b9840.392ENSMGAG00000003028ATXN19250.132Meleagris_gallopavo
ENSXMAG00000014270atxn1b9939.642ENSMAUG00000011491Atxn19939.483Mesocricetus_auratus
ENSXMAG00000014270atxn1b9938.300ENSMICG00000011875ATXN19938.300Microcebus_murinus
ENSXMAG00000014270atxn1b9939.665ENSMOCG00000001527Atxn19939.506Microtus_ochrogaster
ENSXMAG00000014270atxn1b9940.909ENSMMOG00000018593atxn1a9148.792Mola_mola
ENSXMAG00000014270atxn1b9974.338ENSMMOG00000002884atxn1b10087.050Mola_mola
ENSXMAG00000014270atxn1b9939.978ENSMODG00000010827ATXN19938.753Monodelphis_domestica
ENSXMAG00000014270atxn1b9368.889ENSMALG00000005209atxn1a9940.732Monopterus_albus
ENSXMAG00000014270atxn1b9980.779ENSMALG00000012137atxn1b9979.805Monopterus_albus
ENSXMAG00000014270atxn1b9939.306MGP_CAROLIEiJ_G0018479Atxn19939.012Mus_caroli
ENSXMAG00000014270atxn1b9939.485ENSMUSG00000046876Atxn19939.184Mus_musculus
ENSXMAG00000014270atxn1b9939.754MGP_PahariEiJ_G0019546Atxn19939.506Mus_pahari
ENSXMAG00000014270atxn1b9939.485MGP_SPRETEiJ_G0019357Atxn19938.937Mus_spretus
ENSXMAG00000014270atxn1b9938.350ENSMPUG00000005398ATXN19938.508Mustela_putorius_furo
ENSXMAG00000014270atxn1b9940.044ENSMLUG00000000896ATXN19939.334Myotis_lucifugus
ENSXMAG00000014270atxn1b9840.025ENSNGAG00000020481Atxn19939.778Nannospalax_galili
ENSXMAG00000014270atxn1b9375.556ENSNBRG00000013216atxn1a8875.556Neolamprologus_brichardi
ENSXMAG00000014270atxn1b10075.448ENSNBRG00000014776atxn1b10075.967Neolamprologus_brichardi
ENSXMAG00000014270atxn1b9938.920ENSNLEG00000001064ATXN19939.342Nomascus_leucogenys
ENSXMAG00000014270atxn1b9839.052ENSMEUG00000014680ATXN19637.923Notamacropus_eugenii
ENSXMAG00000014270atxn1b9838.311ENSOPRG00000004813ATXN19937.904Ochotona_princeps
ENSXMAG00000014270atxn1b9939.246ENSODEG00000006297ATXN19939.357Octodon_degus
ENSXMAG00000014270atxn1b10081.513ENSONIG00000003094atxn1b10080.552Oreochromis_niloticus
ENSXMAG00000014270atxn1b8933.971ENSOANG00000011866ATXN19733.655Ornithorhynchus_anatinus
ENSXMAG00000014270atxn1b9938.695ENSOCUG00000015360ATXN19939.506Oryctolagus_cuniculus
ENSXMAG00000014270atxn1b9937.288ENSORLG00000013003atxn1a9936.994Oryzias_latipes
ENSXMAG00000014270atxn1b10078.031ENSORLG00000008288atxn1b10077.431Oryzias_latipes
ENSXMAG00000014270atxn1b10077.126ENSORLG00020013514atxn1b10076.527Oryzias_latipes_hni
ENSXMAG00000014270atxn1b9937.201ENSORLG00020006722atxn1a9936.763Oryzias_latipes_hni
ENSXMAG00000014270atxn1b10077.791ENSORLG00015019876atxn1b10077.431Oryzias_latipes_hsok
ENSXMAG00000014270atxn1b9937.656ENSORLG00015014668atxn1a9046.265Oryzias_latipes_hsok
ENSXMAG00000014270atxn1b10078.151ENSOMEG00000003259atxn1b10077.671Oryzias_melastigma
ENSXMAG00000014270atxn1b9938.276ENSOMEG00000012883atxn1a9838.639Oryzias_melastigma
ENSXMAG00000014270atxn1b9938.846ENSOGAG00000028623ATXN110038.964Otolemur_garnettii
ENSXMAG00000014270atxn1b7652.941ENSOARG00000012141ATXN18652.941Ovis_aries
ENSXMAG00000014270atxn1b9938.411ENSPPAG00000028993ATXN19938.655Pan_paniscus
ENSXMAG00000014270atxn1b9840.838ENSPPRG00000004547ATXN19939.752Panthera_pardus
ENSXMAG00000014270atxn1b9938.995ENSPTRG00000039250ATXN19938.795Pan_troglodytes
ENSXMAG00000014270atxn1b9938.694ENSPANG00000024249ATXN19938.706Papio_anubis
ENSXMAG00000014270atxn1b9946.092ENSPKIG00000018323atxn1b9945.675Paramormyrops_kingsleyae
ENSXMAG00000014270atxn1b9842.625ENSPKIG00000003054atxn1a9942.974Paramormyrops_kingsleyae
ENSXMAG00000014270atxn1b7735.093ENSPSIG00000007158ATXN19236.377Pelodiscus_sinensis
ENSXMAG00000014270atxn1b7068.889ENSPMGG00000022926atxn1a8247.541Periophthalmus_magnuspinnatus
ENSXMAG00000014270atxn1b9966.946ENSPMGG00000013610atxn1b10066.527Periophthalmus_magnuspinnatus
ENSXMAG00000014270atxn1b9939.194ENSPEMG00000014930Atxn19939.459Peromyscus_maniculatus_bairdii
ENSXMAG00000014270atxn1b9940.447ENSPCIG00000019413ATXN19248.724Phascolarctos_cinereus
ENSXMAG00000014270atxn1b9270.732ENSPFOG00000014422atxn1a9938.655Poecilia_formosa
ENSXMAG00000014270atxn1b8570.732ENSPLAG00000018978atxn1a9573.333Poecilia_latipinna
ENSXMAG00000014270atxn1b10097.818ENSPLAG00000018703atxn1b10097.818Poecilia_latipinna
ENSXMAG00000014270atxn1b10097.455ENSPMEG00000023723atxn1b10097.455Poecilia_mexicana
ENSXMAG00000014270atxn1b9373.333ENSPMEG00000002647atxn1a9938.462Poecilia_mexicana
ENSXMAG00000014270atxn1b10097.697ENSPREG00000020308atxn1b10097.697Poecilia_reticulata
ENSXMAG00000014270atxn1b9268.293ENSPREG00000008333atxn1a9938.794Poecilia_reticulata
ENSXMAG00000014270atxn1b9938.054ENSPPYG00000016254ATXN19938.462Pongo_abelii
ENSXMAG00000014270atxn1b7358.491ENSPCAG00000008196ATXN17158.491Procavia_capensis
ENSXMAG00000014270atxn1b9938.521ENSPCOG00000013612ATXN19938.547Propithecus_coquereli
ENSXMAG00000014270atxn1b8938.989ENSPVAG00000016937ATXN19635.951Pteropus_vampyrus
ENSXMAG00000014270atxn1b10075.862ENSPNYG00000017095atxn1b10076.381Pundamilia_nyererei
ENSXMAG00000014270atxn1b9375.556ENSPNYG00000011920atxn1a8875.556Pundamilia_nyererei
ENSXMAG00000014270atxn1b9942.346ENSPNAG00000001226atxn1b9940.400Pygocentrus_nattereri
ENSXMAG00000014270atxn1b9942.303ENSPNAG00000010587atxn1a9942.792Pygocentrus_nattereri
ENSXMAG00000014270atxn1b9940.492ENSRNOG00000016998Atxn19939.506Rattus_norvegicus
ENSXMAG00000014270atxn1b9937.980ENSRBIG00000028213ATXN19938.545Rhinopithecus_bieti
ENSXMAG00000014270atxn1b9938.300ENSRROG00000032751ATXN19938.780Rhinopithecus_roxellana
ENSXMAG00000014270atxn1b8035.257ENSSBOG00000030307-9134.477Saimiri_boliviensis_boliviensis
ENSXMAG00000014270atxn1b9938.606ENSSBOG00000017381-9939.364Saimiri_boliviensis_boliviensis
ENSXMAG00000014270atxn1b9943.800ENSSFOG00015000179atxn1b9940.313Scleropages_formosus
ENSXMAG00000014270atxn1b9940.978ENSSFOG00015005189atxn19941.327Scleropages_formosus
ENSXMAG00000014270atxn1b9171.429ENSSMAG00000007731atxn1a9440.139Scophthalmus_maximus
ENSXMAG00000014270atxn1b10078.708ENSSMAG00000019621atxn1b8394.872Scophthalmus_maximus
ENSXMAG00000014270atxn1b9373.333ENSSDUG00000011376atxn1a8873.333Seriola_dumerili
ENSXMAG00000014270atxn1b10082.953ENSSDUG00000006990atxn1b10082.156Seriola_dumerili
ENSXMAG00000014270atxn1b10083.193ENSSLDG00000016306atxn1b10082.395Seriola_lalandi_dorsalis
ENSXMAG00000014270atxn1b9373.333ENSSLDG00000013505atxn1a8873.333Seriola_lalandi_dorsalis
ENSXMAG00000014270atxn1b9938.920ENSSPUG00000016650ATXN19939.136Sphenodon_punctatus
ENSXMAG00000014270atxn1b9377.778ENSSPAG00000019849atxn1a8877.778Stegastes_partitus
ENSXMAG00000014270atxn1b10083.173ENSSPAG00000003388atxn1b10082.332Stegastes_partitus
ENSXMAG00000014270atxn1b9938.925ENSSSCG00000001065ATXN19248.371Sus_scrofa
ENSXMAG00000014270atxn1b9938.020ENSTGUG00000005986ATXN19937.683Taeniopygia_guttata
ENSXMAG00000014270atxn1b9972.509ENSTRUG00000024789atxn1b9971.669Takifugu_rubripes
ENSXMAG00000014270atxn1b9938.618ENSTRUG00000014645atxn1a9938.311Takifugu_rubripes
ENSXMAG00000014270atxn1b9970.925ENSTNIG00000018398atxn1b9970.073Tetraodon_nigroviridis
ENSXMAG00000014270atxn1b9941.047ENSTNIG00000005089atxn1a9940.528Tetraodon_nigroviridis
ENSXMAG00000014270atxn1b9839.184ENSTTRG00000014678ATXN19638.926Tursiops_truncatus
ENSXMAG00000014270atxn1b9839.120ENSUAMG00000004064ATXN19938.725Ursus_americanus
ENSXMAG00000014270atxn1b5143.830ENSUMAG00000017635-9243.830Ursus_maritimus
ENSXMAG00000014270atxn1b9938.436ENSVVUG00000003386ATXN19247.870Vulpes_vulpes
ENSXMAG00000014270atxn1b9937.643ENSXETG00000014184atxn19937.579Xenopus_tropicalis
ENSXMAG00000014270atxn1b9938.603ENSXCOG00000020061atxn1a9938.426Xiphophorus_couchianus
ENSXMAG00000014270atxn1b10091.448ENSXCOG00000019714atxn1b10091.448Xiphophorus_couchianus
ENSXMAG00000014270atxn1b9371.111ENSXMAG00000003615atxn1a9938.540Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us