EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014572 (Gene tree)
Gene ID: 102232842
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 5326 bases
Position: chr6:30086093-30091418
Accession: 102232842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000014612	RIO1	PF01163.22	6.6e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000014632	-	1536	XM_005814066	ENSXMAP00000014612	511 (aa)	XP_005814123	M4AJG8

Gene Model

Click here to download ENSXMAG00000014572's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014572	riok1	82	71.765	ENSG00000124784	RIOK1	70	74.185	Homo_sapiens
ENSXMAG00000014572	riok1	83	70.481	ENSAMEG00000017367	RIOK1	71	73.449	Ailuropoda_melanoleuca
ENSXMAG00000014572	riok1	80	78.935	ENSACIG00000003735	riok1	75	79.024	Amphilophus_citrinellus
ENSXMAG00000014572	riok1	91	73.849	ENSAOCG00000011818	riok1	87	74.419	Amphiprion_ocellaris
ENSXMAG00000014572	riok1	91	73.958	ENSAPEG00000001345	riok1	87	74.473	Amphiprion_percula
ENSXMAG00000014572	riok1	74	81.627	ENSATEG00000006594	riok1	90	81.627	Anabas_testudineus
ENSXMAG00000014572	riok1	79	73.219	ENSAPLG00000004196	RIOK1	83	74.619	Anas_platyrhynchos
ENSXMAG00000014572	riok1	93	64.562	ENSACAG00000000695	RIOK1	71	72.682	Anolis_carolinensis
ENSXMAG00000014572	riok1	85	59.545	ENSANAG00000023777	RIOK1	70	61.893	Aotus_nancymaae
ENSXMAG00000014572	riok1	91	74.684	ENSACLG00000015799	riok1	87	74.735	Astatotilapia_calliptera
ENSXMAG00000014572	riok1	81	71.942	ENSAMXG00000015286	riok1	71	72.330	Astyanax_mexicanus
ENSXMAG00000014572	riok1	82	71.132	ENSBTAG00000013821	RIOK1	70	74.436	Bos_taurus
ENSXMAG00000014572	riok1	64	53.433	WBGene00019698	riok-1	57	56.954	Caenorhabditis_elegans
ENSXMAG00000014572	riok1	82	71.059	ENSCJAG00000042960	RIOK1	70	73.684	Callithrix_jacchus
ENSXMAG00000014572	riok1	82	71.226	ENSCAFG00000009563	RIOK1	70	74.372	Canis_familiaris
ENSXMAG00000014572	riok1	82	71.226	ENSCAFG00020013233	RIOK1	71	74.372	Canis_lupus_dingo
ENSXMAG00000014572	riok1	83	71.663	ENSCHIG00000001534	RIOK1	70	74.436	Capra_hircus
ENSXMAG00000014572	riok1	62	67.601	ENSTSYG00000011368	RIOK1	75	71.186	Carlito_syrichta
ENSXMAG00000014572	riok1	79	71.358	ENSCAPG00000008489	RIOK1	82	74.016	Cavia_aperea
ENSXMAG00000014572	riok1	82	71.868	ENSCPOG00000009882	RIOK1	70	74.436	Cavia_porcellus
ENSXMAG00000014572	riok1	85	69.091	ENSCCAG00000024061	RIOK1	72	71.845	Cebus_capucinus
ENSXMAG00000014572	riok1	82	71.529	ENSCATG00000001548	RIOK1	76	73.791	Cercocebus_atys
ENSXMAG00000014572	riok1	82	70.588	ENSCLAG00000003522	RIOK1	84	65.971	Chinchilla_lanigera
ENSXMAG00000014572	riok1	82	71.059	ENSCSAG00000007396	RIOK1	74	73.434	Chlorocebus_sabaeus
ENSXMAG00000014572	riok1	84	68.973	ENSCPBG00000008685	RIOK1	78	68.750	Chrysemys_picta_bellii
ENSXMAG00000014572	riok1	82	71.529	ENSCANG00000032919	RIOK1	70	73.935	Colobus_angolensis_palliatus
ENSXMAG00000014572	riok1	94	62.672	ENSCGRG00001018868	Riok1	84	64.361	Cricetulus_griseus_chok1gshd
ENSXMAG00000014572	riok1	94	62.672	ENSCGRG00000008015	Riok1	84	64.361	Cricetulus_griseus_crigri
ENSXMAG00000014572	riok1	74	56.736	ENSCSEG00000015014	riok1	72	56.658	Cynoglossus_semilaevis
ENSXMAG00000014572	riok1	80	72.155	ENSDARG00000016399	riok1	74	72.263	Danio_rerio
ENSXMAG00000014572	riok1	84	70.481	ENSDNOG00000015813	RIOK1	84	65.361	Dasypus_novemcinctus
ENSXMAG00000014572	riok1	82	71.059	ENSDORG00000008530	Riok1	70	73.684	Dipodomys_ordii
ENSXMAG00000014572	riok1	80	53.735	FBgn0036187	RIOK1	65	55.641	Drosophila_melanogaster
ENSXMAG00000014572	riok1	82	70.588	ENSETEG00000020273	RIOK1	71	73.434	Echinops_telfairi
ENSXMAG00000014572	riok1	90	59.298	ENSEBUG00000013672	riok1	85	60.125	Eptatretus_burgeri
ENSXMAG00000014572	riok1	82	71.059	ENSEASG00005012032	RIOK1	70	73.935	Equus_asinus_asinus
ENSXMAG00000014572	riok1	82	71.059	ENSECAG00000009007	RIOK1	70	73.935	Equus_caballus
ENSXMAG00000014572	riok1	81	60.714	ENSEEUG00000007123	RIOK1	90	62.944	Erinaceus_europaeus
ENSXMAG00000014572	riok1	97	65.294	ENSELUG00000017029	riok1	75	74.029	Esox_lucius
ENSXMAG00000014572	riok1	83	69.159	ENSFCAG00000027290	RIOK1	73	70.843	Felis_catus
ENSXMAG00000014572	riok1	79	73.659	ENSFALG00000013244	RIOK1	73	72.596	Ficedula_albicollis
ENSXMAG00000014572	riok1	81	70.546	ENSFDAG00000019139	RIOK1	74	70.673	Fukomys_damarensis
ENSXMAG00000014572	riok1	86	82.511	ENSFHEG00000021419	riok1	99	83.516	Fundulus_heteroclitus
ENSXMAG00000014572	riok1	79	70.343	ENSGMOG00000018668	riok1	94	70.896	Gadus_morhua
ENSXMAG00000014572	riok1	76	84.794	ENSGAFG00000004091	riok1	66	84.794	Gambusia_affinis
ENSXMAG00000014572	riok1	91	72.479	ENSGACG00000002496	riok1	80	80.344	Gasterosteus_aculeatus
ENSXMAG00000014572	riok1	79	72.794	ENSGAGG00000002262	RIOK1	88	72.330	Gopherus_agassizii
ENSXMAG00000014572	riok1	62	76.582	ENSGGOG00000011037	RIOK1	62	76.582	Gorilla_gorilla
ENSXMAG00000014572	riok1	87	66.297	ENSHGLG00000008699	RIOK1	84	64.657	Heterocephalus_glaber_female
ENSXMAG00000014572	riok1	82	69.412	ENSHGLG00100008188	RIOK1	71	72.431	Heterocephalus_glaber_male
ENSXMAG00000014572	riok1	82	75.592	ENSHCOG00000013275	riok1	76	76.716	Hippocampus_comes
ENSXMAG00000014572	riok1	80	73.786	ENSIPUG00000003290	riok1	73	73.723	Ictalurus_punctatus
ENSXMAG00000014572	riok1	80	72.289	ENSSTOG00000009289	RIOK1	70	74.185	Ictidomys_tridecemlineatus
ENSXMAG00000014572	riok1	82	71.564	ENSJJAG00000015152	Riok1	71	73.935	Jaculus_jaculus
ENSXMAG00000014572	riok1	76	80.206	ENSKMAG00000019378	riok1	100	80.206	Kryptolebias_marmoratus
ENSXMAG00000014572	riok1	81	79.952	ENSLBEG00000016650	riok1	73	80.244	Labrus_bergylta
ENSXMAG00000014572	riok1	85	59.292	ENSLACG00000000300	RIOK1	72	62.683	Latimeria_chalumnae
ENSXMAG00000014572	riok1	91	68.958	ENSLOCG00000011728	riok1	85	68.000	Lepisosteus_oculatus
ENSXMAG00000014572	riok1	94	66.258	ENSLAFG00000005504	RIOK1	83	66.738	Loxodonta_africana
ENSXMAG00000014572	riok1	82	71.529	ENSMFAG00000029990	RIOK1	70	73.935	Macaca_fascicularis
ENSXMAG00000014572	riok1	82	71.294	ENSMMUG00000015577	RIOK1	70	73.684	Macaca_mulatta
ENSXMAG00000014572	riok1	82	68.000	ENSMNEG00000034396	RIOK1	80	72.679	Macaca_nemestrina
ENSXMAG00000014572	riok1	82	71.529	ENSMLEG00000026327	RIOK1	70	73.935	Mandrillus_leucophaeus
ENSXMAG00000014572	riok1	91	74.316	ENSMAMG00000019557	riok1	87	74.737	Mastacembelus_armatus
ENSXMAG00000014572	riok1	91	74.790	ENSMZEG00005019482	riok1	87	74.841	Maylandia_zebra
ENSXMAG00000014572	riok1	78	74.564	ENSMGAG00000003816	RIOK1	84	65.481	Meleagris_gallopavo
ENSXMAG00000014572	riok1	95	61.706	ENSMAUG00000012751	Riok1	84	64.842	Mesocricetus_auratus
ENSXMAG00000014572	riok1	82	71.059	ENSMICG00000044301	RIOK1	59	74.185	Microcebus_murinus
ENSXMAG00000014572	riok1	94	62.575	ENSMOCG00000017032	Riok1	71	70.927	Microtus_ochrogaster
ENSXMAG00000014572	riok1	76	72.182	ENSMMOG00000020598	riok1	77	72.662	Mola_mola
ENSXMAG00000014572	riok1	82	70.142	ENSMODG00000009964	RIOK1	85	65.021	Monodelphis_domestica
ENSXMAG00000014572	riok1	76	73.779	ENSMALG00000019982	riok1	81	73.779	Monopterus_albus
ENSXMAG00000014572	riok1	82	68.360	MGP_CAROLIEiJ_G0018439	Riok1	70	71.930	Mus_caroli
ENSXMAG00000014572	riok1	82	68.822	ENSMUSG00000021428	Riok1	94	68.557	Mus_musculus
ENSXMAG00000014572	riok1	82	68.360	MGP_PahariEiJ_G0019507	Riok1	70	71.679	Mus_pahari
ENSXMAG00000014572	riok1	82	68.591	MGP_SPRETEiJ_G0019319	Riok1	70	71.930	Mus_spretus
ENSXMAG00000014572	riok1	83	70.159	ENSMPUG00000000570	RIOK1	84	66.180	Mustela_putorius_furo
ENSXMAG00000014572	riok1	82	71.230	ENSMLUG00000015312	RIOK1	71	73.945	Myotis_lucifugus
ENSXMAG00000014572	riok1	82	70.824	ENSNGAG00000021734	Riok1	71	73.684	Nannospalax_galili
ENSXMAG00000014572	riok1	77	81.108	ENSNBRG00000017489	riok1	75	81.218	Neolamprologus_brichardi
ENSXMAG00000014572	riok1	76	68.193	ENSNLEG00000011621	RIOK1	71	68.193	Nomascus_leucogenys
ENSXMAG00000014572	riok1	65	84.000	ENSMEUG00000006679	-	55	55.049	Notamacropus_eugenii
ENSXMAG00000014572	riok1	72	65.499	ENSOPRG00000009524	RIOK1	100	65.499	Ochotona_princeps
ENSXMAG00000014572	riok1	60	65.161	ENSODEG00000005663	RIOK1	76	64.968	Octodon_degus
ENSXMAG00000014572	riok1	91	72.651	ENSONIG00000014010	riok1	86	73.109	Oreochromis_niloticus
ENSXMAG00000014572	riok1	76	74.615	ENSOANG00000012553	RIOK1	82	75.591	Ornithorhynchus_anatinus
ENSXMAG00000014572	riok1	82	71.529	ENSOCUG00000011824	RIOK1	84	67.158	Oryctolagus_cuniculus
ENSXMAG00000014572	riok1	92	75.208	ENSORLG00000008221	riok1	87	75.476	Oryzias_latipes
ENSXMAG00000014572	riok1	91	73.885	ENSORLG00020013838	riok1	61	73.885	Oryzias_latipes_hni
ENSXMAG00000014572	riok1	91	75.847	ENSORLG00015009817	riok1	87	75.847	Oryzias_latipes_hsok
ENSXMAG00000014572	riok1	91	76.271	ENSOMEG00000002758	riok1	78	76.271	Oryzias_melastigma
ENSXMAG00000014572	riok1	77	69.598	ENSOGAG00000010192	RIOK1	71	69.598	Otolemur_garnettii
ENSXMAG00000014572	riok1	86	69.663	ENSOARG00000017747	RIOK1	70	74.687	Ovis_aries
ENSXMAG00000014572	riok1	82	62.383	ENSPPAG00000016349	RIOK1	77	68.571	Pan_paniscus
ENSXMAG00000014572	riok1	83	69.464	ENSPPRG00000001932	RIOK1	71	72.457	Panthera_pardus
ENSXMAG00000014572	riok1	83	69.464	ENSPTIG00000018545	RIOK1	71	72.457	Panthera_tigris_altaica
ENSXMAG00000014572	riok1	82	71.529	ENSPTRG00000017700	RIOK1	70	73.935	Pan_troglodytes
ENSXMAG00000014572	riok1	82	71.294	ENSPANG00000016522	RIOK1	70	73.935	Papio_anubis
ENSXMAG00000014572	riok1	89	68.443	ENSPKIG00000006442	riok1	85	68.577	Paramormyrops_kingsleyae
ENSXMAG00000014572	riok1	83	70.946	ENSPSIG00000006488	RIOK1	83	68.076	Pelodiscus_sinensis
ENSXMAG00000014572	riok1	80	75.490	ENSPMGG00000017807	riok1	96	71.944	Periophthalmus_magnuspinnatus
ENSXMAG00000014572	riok1	82	68.750	ENSPEMG00000017844	Riok1	84	65.546	Peromyscus_maniculatus_bairdii
ENSXMAG00000014572	riok1	76	62.136	ENSPMAG00000006351	riok1	98	62.136	Petromyzon_marinus
ENSXMAG00000014572	riok1	82	69.504	ENSPCIG00000012653	RIOK1	86	64.742	Phascolarctos_cinereus
ENSXMAG00000014572	riok1	97	96.162	ENSPFOG00000011532	riok1	93	96.162	Poecilia_formosa
ENSXMAG00000014572	riok1	97	95.960	ENSPLAG00000001341	riok1	93	95.960	Poecilia_latipinna
ENSXMAG00000014572	riok1	97	96.162	ENSPMEG00000007710	riok1	93	96.162	Poecilia_mexicana
ENSXMAG00000014572	riok1	97	94.737	ENSPREG00000009237	riok1	93	93.522	Poecilia_reticulata
ENSXMAG00000014572	riok1	82	71.059	ENSPPYG00000016207	RIOK1	70	73.684	Pongo_abelii
ENSXMAG00000014572	riok1	90	55.579	ENSPCAG00000007892	RIOK1	83	55.437	Procavia_capensis
ENSXMAG00000014572	riok1	84	70.968	ENSPVAG00000014091	RIOK1	84	66.180	Pteropus_vampyrus
ENSXMAG00000014572	riok1	80	72.816	ENSPNAG00000015435	riok1	73	72.749	Pygocentrus_nattereri
ENSXMAG00000014572	riok1	84	68.129	ENSRNOG00000014049	Riok1	82	72.178	Rattus_norvegicus
ENSXMAG00000014572	riok1	82	71.294	ENSRBIG00000036685	RIOK1	70	73.684	Rhinopithecus_bieti
ENSXMAG00000014572	riok1	82	71.529	ENSRROG00000036611	RIOK1	70	73.935	Rhinopithecus_roxellana
ENSXMAG00000014572	riok1	68	38.259	YOR119C	RIO1	74	38.259	Saccharomyces_cerevisiae
ENSXMAG00000014572	riok1	85	69.773	ENSSBOG00000012588	RIOK1	75	72.573	Saimiri_boliviensis_boliviensis
ENSXMAG00000014572	riok1	78	72.277	ENSSHAG00000003091	RIOK1	92	65.417	Sarcophilus_harrisii
ENSXMAG00000014572	riok1	80	73.608	ENSSFOG00015001035	riok1	85	68.008	Scleropages_formosus
ENSXMAG00000014572	riok1	92	74.066	ENSSLDG00000017657	riok1	87	74.316	Seriola_lalandi_dorsalis
ENSXMAG00000014572	riok1	80	61.244	ENSSPUG00000007624	RIOK1	67	64.439	Sphenodon_punctatus
ENSXMAG00000014572	riok1	91	76.321	ENSSPAG00000022710	riok1	87	76.824	Stegastes_partitus
ENSXMAG00000014572	riok1	82	69.176	ENSSSCG00000001024	RIOK1	84	64.619	Sus_scrofa
ENSXMAG00000014572	riok1	79	73.415	ENSTGUG00000002331	RIOK1	73	72.356	Taeniopygia_guttata
ENSXMAG00000014572	riok1	84	62.818	ENSTRUG00000002854	riok1	93	64.737	Takifugu_rubripes
ENSXMAG00000014572	riok1	91	69.328	ENSTNIG00000003078	riok1	84	68.842	Tetraodon_nigroviridis
ENSXMAG00000014572	riok1	82	67.529	ENSTBEG00000016730	RIOK1	70	69.925	Tupaia_belangeri
ENSXMAG00000014572	riok1	75	74.227	ENSTTRG00000017335	RIOK1	81	74.227	Tursiops_truncatus
ENSXMAG00000014572	riok1	87	68.308	ENSUAMG00000003721	RIOK1	72	73.697	Ursus_americanus
ENSXMAG00000014572	riok1	83	70.938	ENSUMAG00000018461	RIOK1	71	73.945	Ursus_maritimus
ENSXMAG00000014572	riok1	82	71.698	ENSVVUG00000005018	RIOK1	70	74.372	Vulpes_vulpes
ENSXMAG00000014572	riok1	96	59.245	ENSXETG00000020436	riok1	66	73.278	Xenopus_tropicalis
ENSXMAG00000014572	riok1	82	92.637	ENSXCOG00000000245	riok1	92	92.637	Xiphophorus_couchianus