EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014606 (Gene tree)
Gene ID: 102230704
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC domain-containing protein%2C mitochondrial
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 3775 bases
Position: chr3:6066704-6070478
Accession: 102230704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000014633	Sua5_yciO_yrdC	PF01300.18	2.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000014653	-	933	XM_005796048	ENSXMAP00000014633	282 (aa)	XP_005796105	M4AJI9

Gene Model

Click here to download ENSXMAG00000014606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014606	yrdc	79	54.825	ENSG00000196449	YRDC	82	54.545	Homo_sapiens
ENSXMAG00000014606	yrdc	95	77.528	ENSAPOG00000024293	yrdc	100	77.528	Acanthochromis_polyacanthus
ENSXMAG00000014606	yrdc	63	59.563	ENSAMEG00000001173	YRDC	97	59.563	Ailuropoda_melanoleuca
ENSXMAG00000014606	yrdc	93	80.460	ENSACIG00000017330	yrdc	98	80.460	Amphilophus_citrinellus
ENSXMAG00000014606	yrdc	95	77.903	ENSAOCG00000021647	yrdc	100	77.903	Amphiprion_ocellaris
ENSXMAG00000014606	yrdc	95	77.528	ENSAPEG00000006164	yrdc	100	77.528	Amphiprion_percula
ENSXMAG00000014606	yrdc	94	75.564	ENSATEG00000010086	yrdc	100	75.564	Anabas_testudineus
ENSXMAG00000014606	yrdc	67	59.794	ENSACAG00000017203	YRDC	93	59.898	Anolis_carolinensis
ENSXMAG00000014606	yrdc	70	57.921	ENSANAG00000028788	-	86	57.921	Aotus_nancymaae
ENSXMAG00000014606	yrdc	80	51.502	ENSANAG00000031052	-	84	51.502	Aotus_nancymaae
ENSXMAG00000014606	yrdc	95	78.358	ENSACLG00000027775	yrdc	100	78.358	Astatotilapia_calliptera
ENSXMAG00000014606	yrdc	83	70.085	ENSAMXG00000037791	yrdc	89	70.085	Astyanax_mexicanus
ENSXMAG00000014606	yrdc	90	53.101	ENSBTAG00000006510	YRDC	92	53.101	Bos_taurus
ENSXMAG00000014606	yrdc	76	34.722	WBGene00012997	Y48C3A.18	98	34.722	Caenorhabditis_elegans
ENSXMAG00000014606	yrdc	80	54.545	ENSCJAG00000002078	YRDC	63	54.545	Callithrix_jacchus
ENSXMAG00000014606	yrdc	87	52.209	ENSCAFG00000003253	YRDC	92	51.938	Canis_familiaris
ENSXMAG00000014606	yrdc	87	52.610	ENSCAFG00020007843	YRDC	92	52.326	Canis_lupus_dingo
ENSXMAG00000014606	yrdc	90	51.550	ENSCHIG00000007882	YRDC	92	51.550	Capra_hircus
ENSXMAG00000014606	yrdc	59	58.824	ENSTSYG00000005555	YRDC	61	58.824	Carlito_syrichta
ENSXMAG00000014606	yrdc	80	56.710	ENSCPOG00000036144	YRDC	82	56.710	Cavia_porcellus
ENSXMAG00000014606	yrdc	80	54.545	ENSCCAG00000028891	YRDC	82	54.545	Cebus_capucinus
ENSXMAG00000014606	yrdc	79	52.632	ENSCATG00000036928	YRDC	82	53.680	Cercocebus_atys
ENSXMAG00000014606	yrdc	67	60.938	ENSCLAG00000015012	YRDC	92	52.107	Chinchilla_lanigera
ENSXMAG00000014606	yrdc	79	52.632	ENSCSAG00000001116	YRDC	82	53.680	Chlorocebus_sabaeus
ENSXMAG00000014606	yrdc	59	55.090	ENSCHOG00000005500	YRDC	79	55.090	Choloepus_hoffmanni
ENSXMAG00000014606	yrdc	76	61.009	ENSCPBG00000018446	YRDC	90	61.009	Chrysemys_picta_bellii
ENSXMAG00000014606	yrdc	71	48.113	ENSCING00000007564	-	98	48.113	Ciona_intestinalis
ENSXMAG00000014606	yrdc	71	46.190	ENSCSAVG00000009982	-	98	46.190	Ciona_savignyi
ENSXMAG00000014606	yrdc	79	53.070	ENSCANG00000031111	YRDC	82	54.113	Colobus_angolensis_palliatus
ENSXMAG00000014606	yrdc	79	49.561	ENSCGRG00001000829	-	72	46.743	Cricetulus_griseus_chok1gshd
ENSXMAG00000014606	yrdc	79	54.825	ENSCGRG00001014496	-	82	54.545	Cricetulus_griseus_chok1gshd
ENSXMAG00000014606	yrdc	88	68.340	ENSCSEG00000019075	yrdc	95	68.340	Cynoglossus_semilaevis
ENSXMAG00000014606	yrdc	95	82.772	ENSCVAG00000017355	yrdc	100	82.772	Cyprinodon_variegatus
ENSXMAG00000014606	yrdc	83	67.094	ENSDARG00000041428	yrdc	98	67.094	Danio_rerio
ENSXMAG00000014606	yrdc	67	43.085	ENSDNOG00000036198	-	94	43.085	Dasypus_novemcinctus
ENSXMAG00000014606	yrdc	79	53.070	ENSDNOG00000038789	-	95	49.388	Dasypus_novemcinctus
ENSXMAG00000014606	yrdc	66	60.847	ENSDORG00000008788	Yrdc	84	60.847	Dipodomys_ordii
ENSXMAG00000014606	yrdc	72	45.933	FBgn0061361	CG33786	84	45.933	Drosophila_melanogaster
ENSXMAG00000014606	yrdc	90	40.996	ENSETEG00000003442	YRDC	93	40.996	Echinops_telfairi
ENSXMAG00000014606	yrdc	83	47.234	ENSEBUG00000014080	yrdc	99	47.234	Eptatretus_burgeri
ENSXMAG00000014606	yrdc	71	59.512	ENSEASG00005012253	YRDC	93	52.490	Equus_asinus_asinus
ENSXMAG00000014606	yrdc	90	52.874	ENSECAG00000022522	YRDC	93	52.874	Equus_caballus
ENSXMAG00000014606	yrdc	95	65.314	ENSELUG00000018071	yrdc	89	65.314	Esox_lucius
ENSXMAG00000014606	yrdc	79	54.386	ENSFCAG00000011018	YRDC	93	51.341	Felis_catus
ENSXMAG00000014606	yrdc	67	62.694	ENSFALG00000000964	YRDC	90	61.929	Ficedula_albicollis
ENSXMAG00000014606	yrdc	99	83.094	ENSFHEG00000001029	yrdc	99	85.306	Fundulus_heteroclitus
ENSXMAG00000014606	yrdc	73	77.073	ENSGMOG00000015635	yrdc	99	77.073	Gadus_morhua
ENSXMAG00000014606	yrdc	73	60.287	ENSGALG00000029001	YRDC	82	60.287	Gallus_gallus
ENSXMAG00000014606	yrdc	95	96.629	ENSGAFG00000008396	yrdc	100	96.629	Gambusia_affinis
ENSXMAG00000014606	yrdc	83	76.371	ENSGACG00000013878	yrdc	98	76.371	Gasterosteus_aculeatus
ENSXMAG00000014606	yrdc	71	62.927	ENSGAGG00000014968	YRDC	89	62.927	Gopherus_agassizii
ENSXMAG00000014606	yrdc	79	54.825	ENSGGOG00000007619	YRDC	82	54.545	Gorilla_gorilla
ENSXMAG00000014606	yrdc	95	77.985	ENSHBUG00000009298	yrdc	100	77.985	Haplochromis_burtoni
ENSXMAG00000014606	yrdc	90	53.257	ENSHGLG00000014075	YRDC	92	53.257	Heterocephalus_glaber_female
ENSXMAG00000014606	yrdc	70	59.901	ENSHGLG00100002734	YRDC	73	59.901	Heterocephalus_glaber_male
ENSXMAG00000014606	yrdc	93	64.368	ENSHCOG00000006598	yrdc	98	64.368	Hippocampus_comes
ENSXMAG00000014606	yrdc	83	69.362	ENSIPUG00000014985	yrdc	97	69.362	Ictalurus_punctatus
ENSXMAG00000014606	yrdc	90	52.107	ENSSTOG00000001643	YRDC	93	52.107	Ictidomys_tridecemlineatus
ENSXMAG00000014606	yrdc	90	82.609	ENSKMAG00000013468	yrdc	95	82.609	Kryptolebias_marmoratus
ENSXMAG00000014606	yrdc	94	79.323	ENSLBEG00000027501	yrdc	99	79.323	Labrus_bergylta
ENSXMAG00000014606	yrdc	94	52.688	ENSLACG00000010689	YRDC	94	63.235	Latimeria_chalumnae
ENSXMAG00000014606	yrdc	82	64.831	ENSLOCG00000003321	yrdc	97	64.831	Lepisosteus_oculatus
ENSXMAG00000014606	yrdc	90	51.724	ENSLAFG00000017556	YRDC	93	51.724	Loxodonta_africana
ENSXMAG00000014606	yrdc	71	55.882	ENSMFAG00000003487	YRDC	96	57.353	Macaca_fascicularis
ENSXMAG00000014606	yrdc	79	52.632	ENSMMUG00000005372	YRDC	61	53.680	Macaca_mulatta
ENSXMAG00000014606	yrdc	79	52.632	ENSMNEG00000029348	YRDC	82	53.680	Macaca_nemestrina
ENSXMAG00000014606	yrdc	94	76.493	ENSMAMG00000007315	yrdc	100	76.493	Mastacembelus_armatus
ENSXMAG00000014606	yrdc	95	78.358	ENSMZEG00005006948	yrdc	100	78.358	Maylandia_zebra
ENSXMAG00000014606	yrdc	71	61.576	ENSMGAG00000002833	YRDC	99	61.576	Meleagris_gallopavo
ENSXMAG00000014606	yrdc	79	55.263	ENSMICG00000031688	YRDC	82	54.978	Microcebus_murinus
ENSXMAG00000014606	yrdc	59	52.727	ENSMOCG00000000164	-	65	52.381	Microtus_ochrogaster
ENSXMAG00000014606	yrdc	95	75.655	ENSMMOG00000002119	yrdc	100	75.655	Mola_mola
ENSXMAG00000014606	yrdc	71	59.512	ENSMODG00000017750	YRDC	73	59.512	Monodelphis_domestica
ENSXMAG00000014606	yrdc	92	76.154	ENSMALG00000012471	yrdc	98	76.154	Monopterus_albus
ENSXMAG00000014606	yrdc	75	54.884	MGP_CAROLIEiJ_G0026453	Yrdc	98	62.136	Mus_caroli
ENSXMAG00000014606	yrdc	80	54.545	ENSMUSG00000028889	Yrdc	100	62.857	Mus_musculus
ENSXMAG00000014606	yrdc	80	55.411	MGP_PahariEiJ_G0028784	Yrdc	100	62.857	Mus_pahari
ENSXMAG00000014606	yrdc	80	54.545	MGP_SPRETEiJ_G0027432	Yrdc	82	54.545	Mus_spretus
ENSXMAG00000014606	yrdc	70	57.921	ENSMPUG00000014542	YRDC	81	57.921	Mustela_putorius_furo
ENSXMAG00000014606	yrdc	67	58.333	ENSMLUG00000024310	-	94	58.333	Myotis_lucifugus
ENSXMAG00000014606	yrdc	71	49.020	ENSMLUG00000028796	-	73	49.020	Myotis_lucifugus
ENSXMAG00000014606	yrdc	90	52.490	ENSMLUG00000000955	-	93	52.490	Myotis_lucifugus
ENSXMAG00000014606	yrdc	71	59.024	ENSNGAG00000019099	Yrdc	73	59.024	Nannospalax_galili
ENSXMAG00000014606	yrdc	94	78.113	ENSNBRG00000009475	yrdc	99	78.113	Neolamprologus_brichardi
ENSXMAG00000014606	yrdc	79	54.825	ENSNLEG00000011665	YRDC	82	54.545	Nomascus_leucogenys
ENSXMAG00000014606	yrdc	71	60.488	ENSMEUG00000005068	YRDC	95	60.488	Notamacropus_eugenii
ENSXMAG00000014606	yrdc	79	55.702	ENSODEG00000007401	YRDC	100	61.905	Octodon_degus
ENSXMAG00000014606	yrdc	84	84.454	ENSONIG00000016213	yrdc	100	84.454	Oreochromis_niloticus
ENSXMAG00000014606	yrdc	91	52.652	ENSOCUG00000005384	YRDC	89	52.652	Oryctolagus_cuniculus
ENSXMAG00000014606	yrdc	95	75.556	ENSORLG00000014393	yrdc	100	75.556	Oryzias_latipes
ENSXMAG00000014606	yrdc	95	75.746	ENSORLG00020019663	yrdc	100	75.746	Oryzias_latipes_hni
ENSXMAG00000014606	yrdc	95	75.373	ENSORLG00015004625	yrdc	100	75.373	Oryzias_latipes_hsok
ENSXMAG00000014606	yrdc	95	74.906	ENSOMEG00000018550	yrdc	100	74.906	Oryzias_melastigma
ENSXMAG00000014606	yrdc	80	54.113	ENSOGAG00000030474	YRDC	83	54.113	Otolemur_garnettii
ENSXMAG00000014606	yrdc	87	52.209	ENSOARG00000019873	YRDC	88	52.209	Ovis_aries
ENSXMAG00000014606	yrdc	79	54.386	ENSPPRG00000007752	YRDC	93	51.341	Panthera_pardus
ENSXMAG00000014606	yrdc	79	43.515	ENSPTIG00000019821	YRDC	96	43.515	Panthera_tigris_altaica
ENSXMAG00000014606	yrdc	79	54.825	ENSPTRG00000000557	YRDC	82	54.545	Pan_troglodytes
ENSXMAG00000014606	yrdc	79	52.632	ENSPANG00000006487	YRDC	62	53.680	Papio_anubis
ENSXMAG00000014606	yrdc	92	64.639	ENSPKIG00000004574	yrdc	96	64.639	Paramormyrops_kingsleyae
ENSXMAG00000014606	yrdc	71	60.976	ENSPSIG00000006483	YRDC	72	60.976	Pelodiscus_sinensis
ENSXMAG00000014606	yrdc	96	68.864	ENSPMGG00000004184	yrdc	95	73.361	Periophthalmus_magnuspinnatus
ENSXMAG00000014606	yrdc	60	58.140	ENSPEMG00000016985	Yrdc	75	58.140	Peromyscus_maniculatus_bairdii
ENSXMAG00000014606	yrdc	61	54.237	ENSPMAG00000002905	yrdc	96	54.237	Petromyzon_marinus
ENSXMAG00000014606	yrdc	85	52.419	ENSPCIG00000025731	YRDC	89	52.419	Phascolarctos_cinereus
ENSXMAG00000014606	yrdc	95	95.880	ENSPFOG00000023097	yrdc	100	95.880	Poecilia_formosa
ENSXMAG00000014606	yrdc	95	95.506	ENSPLAG00000020882	yrdc	100	95.506	Poecilia_latipinna
ENSXMAG00000014606	yrdc	94	95.849	ENSPMEG00000013237	yrdc	100	95.849	Poecilia_mexicana
ENSXMAG00000014606	yrdc	95	95.880	ENSPREG00000005285	yrdc	100	95.880	Poecilia_reticulata
ENSXMAG00000014606	yrdc	71	58.049	ENSPPYG00000001523	-	84	58.049	Pongo_abelii
ENSXMAG00000014606	yrdc	91	52.075	ENSPCAG00000016850	YRDC	94	52.075	Procavia_capensis
ENSXMAG00000014606	yrdc	79	55.263	ENSPCOG00000013214	YRDC	82	54.978	Propithecus_coquereli
ENSXMAG00000014606	yrdc	90	51.724	ENSPVAG00000010147	YRDC	93	51.724	Pteropus_vampyrus
ENSXMAG00000014606	yrdc	95	78.358	ENSPNYG00000013956	yrdc	100	78.358	Pundamilia_nyererei
ENSXMAG00000014606	yrdc	76	73.023	ENSPNAG00000015625	yrdc	89	73.023	Pygocentrus_nattereri
ENSXMAG00000014606	yrdc	79	55.507	ENSRNOG00000025424	Yrdc	82	54.978	Rattus_norvegicus
ENSXMAG00000014606	yrdc	79	53.509	ENSRBIG00000032289	YRDC	82	54.113	Rhinopithecus_bieti
ENSXMAG00000014606	yrdc	78	52.193	ENSRROG00000039370	YRDC	78	53.509	Rhinopithecus_roxellana
ENSXMAG00000014606	yrdc	68	58.883	ENSSBOG00000018937	YRDC	84	58.883	Saimiri_boliviensis_boliviensis
ENSXMAG00000014606	yrdc	50	61.111	ENSSHAG00000013957	-	97	61.111	Sarcophilus_harrisii
ENSXMAG00000014606	yrdc	76	67.890	ENSSFOG00015006128	yrdc	94	67.890	Scleropages_formosus
ENSXMAG00000014606	yrdc	84	79.832	ENSSMAG00000005195	yrdc	97	78.125	Scophthalmus_maximus
ENSXMAG00000014606	yrdc	94	78.788	ENSSDUG00000009775	yrdc	99	78.788	Seriola_dumerili
ENSXMAG00000014606	yrdc	50	30.667	ENSSDUG00000006736	-	77	30.667	Seriola_dumerili
ENSXMAG00000014606	yrdc	94	78.788	ENSSLDG00000003196	yrdc	99	78.788	Seriola_lalandi_dorsalis
ENSXMAG00000014606	yrdc	76	58.986	ENSSPUG00000003946	YRDC	84	58.986	Sphenodon_punctatus
ENSXMAG00000014606	yrdc	95	76.779	ENSSPAG00000012559	yrdc	100	76.779	Stegastes_partitus
ENSXMAG00000014606	yrdc	90	52.490	ENSSSCG00000040425	YRDC	92	52.490	Sus_scrofa
ENSXMAG00000014606	yrdc	50	63.699	ENSTGUG00000001507	YRDC	99	63.699	Taeniopygia_guttata
ENSXMAG00000014606	yrdc	89	70.588	ENSTRUG00000005923	yrdc	94	70.980	Takifugu_rubripes
ENSXMAG00000014606	yrdc	53	59.091	ENSTBEG00000008863	YRDC	98	59.091	Tupaia_belangeri
ENSXMAG00000014606	yrdc	69	59.799	ENSUAMG00000006150	YRDC	98	59.799	Ursus_americanus
ENSXMAG00000014606	yrdc	80	42.857	ENSVPAG00000006642	YRDC	97	42.857	Vicugna_pacos
ENSXMAG00000014606	yrdc	72	63.942	ENSXETG00000014420	yrdc	87	63.942	Xenopus_tropicalis
ENSXMAG00000014606	yrdc	84	97.059	ENSXCOG00000000829	yrdc	100	97.059	Xiphophorus_couchianus