EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014747 (Gene tree)
Gene ID: 102229612
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 21532 bases
Position: chr7:6548083-6569614
Accession: 102229612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000014775	TUDOR	PF00567.24	4.3e-74	1	4
ENSXMAP00000014775	TUDOR	PF00567.24	4.3e-74	2	4
ENSXMAP00000014775	TUDOR	PF00567.24	4.3e-74	3	4
ENSXMAP00000014775	TUDOR	PF00567.24	4.3e-74	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000014795	-	4113	XM_014471493	ENSXMAP00000014775	1370 (aa)	XP_014326979	M4AJY1

Gene Model

Click here to download ENSXMAG00000014747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014747	rnf17	77	34.419	ENSG00000132972	RNF17	99	34.833	Homo_sapiens
ENSXMAG00000014747	rnf17	99	62.482	ENSAPOG00000017034	rnf17	97	62.571	Acanthochromis_polyacanthus
ENSXMAG00000014747	rnf17	97	30.355	ENSAMEG00000017340	RNF17	85	30.320	Ailuropoda_melanoleuca
ENSXMAG00000014747	rnf17	99	63.255	ENSAOCG00000018283	rnf17	90	62.999	Amphiprion_ocellaris
ENSXMAG00000014747	rnf17	99	57.028	ENSAPEG00000022338	rnf17	93	56.014	Amphiprion_percula
ENSXMAG00000014747	rnf17	99	63.546	ENSATEG00000002067	rnf17	100	63.262	Anabas_testudineus
ENSXMAG00000014747	rnf17	90	31.791	ENSAPLG00000003969	RNF17	92	31.791	Anas_platyrhynchos
ENSXMAG00000014747	rnf17	77	34.709	ENSACAG00000001418	RNF17	72	33.842	Anolis_carolinensis
ENSXMAG00000014747	rnf17	68	33.178	ENSANAG00000029969	RNF17	65	32.981	Aotus_nancymaae
ENSXMAG00000014747	rnf17	99	62.397	ENSACLG00000018279	rnf17	90	61.918	Astatotilapia_calliptera
ENSXMAG00000014747	rnf17	89	48.519	ENSAMXG00000011002	rnf17	92	48.601	Astyanax_mexicanus
ENSXMAG00000014747	rnf17	55	32.982	ENSBTAG00000000278	RNF17	87	35.000	Bos_taurus
ENSXMAG00000014747	rnf17	77	34.331	ENSCJAG00000018937	RNF17	84	33.735	Callithrix_jacchus
ENSXMAG00000014747	rnf17	77	34.670	ENSCAFG00000007418	RNF17	88	31.013	Canis_familiaris
ENSXMAG00000014747	rnf17	77	34.646	ENSCHIG00000026716	RNF17	87	35.000	Capra_hircus
ENSXMAG00000014747	rnf17	98	30.511	ENSTSYG00000000365	RNF17	88	30.189	Carlito_syrichta
ENSXMAG00000014747	rnf17	77	33.772	ENSCCAG00000026725	RNF17	84	33.162	Cebus_capucinus
ENSXMAG00000014747	rnf17	96	31.054	ENSCATG00000040352	RNF17	83	33.682	Cercocebus_atys
ENSXMAG00000014747	rnf17	77	34.201	ENSCLAG00000004127	RNF17	87	30.645	Chinchilla_lanigera
ENSXMAG00000014747	rnf17	99	30.471	ENSCSAG00000018019	RNF17	87	30.408	Chlorocebus_sabaeus
ENSXMAG00000014747	rnf17	97	31.994	ENSCPBG00000020920	RNF17	91	31.831	Chrysemys_picta_bellii
ENSXMAG00000014747	rnf17	96	30.912	ENSCANG00000032927	RNF17	83	34.031	Colobus_angolensis_palliatus
ENSXMAG00000014747	rnf17	98	31.009	ENSCGRG00001022658	Rnf17	87	31.018	Cricetulus_griseus_chok1gshd
ENSXMAG00000014747	rnf17	98	31.009	ENSCGRG00000009924	Rnf17	87	31.018	Cricetulus_griseus_crigri
ENSXMAG00000014747	rnf17	95	56.050	ENSCSEG00000008626	rnf17	97	55.088	Cynoglossus_semilaevis
ENSXMAG00000014747	rnf17	94	72.384	ENSCVAG00000017008	rnf17	100	57.574	Cyprinodon_variegatus
ENSXMAG00000014747	rnf17	99	43.308	ENSDARG00000056387	rnf17	91	42.887	Danio_rerio
ENSXMAG00000014747	rnf17	59	30.909	ENSEBUG00000016781	-	92	30.645	Eptatretus_burgeri
ENSXMAG00000014747	rnf17	55	32.731	ENSEASG00005001421	-	86	33.750	Equus_asinus_asinus
ENSXMAG00000014747	rnf17	77	34.584	ENSECAG00000017152	RNF17	85	30.465	Equus_caballus
ENSXMAG00000014747	rnf17	66	33.766	ENSEEUG00000000332	RNF17	64	33.036	Erinaceus_europaeus
ENSXMAG00000014747	rnf17	99	47.577	ENSELUG00000005626	rnf17	91	47.308	Esox_lucius
ENSXMAG00000014747	rnf17	97	30.398	ENSFCAG00000004914	RNF17	87	33.750	Felis_catus
ENSXMAG00000014747	rnf17	97	30.686	ENSFALG00000008766	RNF17	86	30.548	Ficedula_albicollis
ENSXMAG00000014747	rnf17	77	33.633	ENSFDAG00000017857	RNF17	85	30.554	Fukomys_damarensis
ENSXMAG00000014747	rnf17	99	68.970	ENSFHEG00000014822	rnf17	90	68.970	Fundulus_heteroclitus
ENSXMAG00000014747	rnf17	88	77.868	ENSGAFG00000004463	rnf17	88	79.444	Gambusia_affinis
ENSXMAG00000014747	rnf17	93	31.089	ENSGAGG00000016999	RNF17	90	31.076	Gopherus_agassizii
ENSXMAG00000014747	rnf17	77	34.331	ENSGGOG00000014491	RNF17	84	33.962	Gorilla_gorilla
ENSXMAG00000014747	rnf17	99	62.466	ENSHBUG00000003554	rnf17	90	61.986	Haplochromis_burtoni
ENSXMAG00000014747	rnf17	77	33.333	ENSHGLG00000007270	RNF17	86	30.353	Heterocephalus_glaber_female
ENSXMAG00000014747	rnf17	77	33.244	ENSHGLG00100017393	RNF17	86	30.284	Heterocephalus_glaber_male
ENSXMAG00000014747	rnf17	90	48.547	ENSHCOG00000017676	rnf17	90	47.887	Hippocampus_comes
ENSXMAG00000014747	rnf17	98	45.560	ENSIPUG00000001087	rnf17	87	50.330	Ictalurus_punctatus
ENSXMAG00000014747	rnf17	52	31.530	ENSSTOG00000011255	-	78	32.122	Ictidomys_tridecemlineatus
ENSXMAG00000014747	rnf17	77	34.133	ENSJJAG00000016584	Rnf17	85	30.850	Jaculus_jaculus
ENSXMAG00000014747	rnf17	99	63.786	ENSKMAG00000013403	rnf17	90	63.580	Kryptolebias_marmoratus
ENSXMAG00000014747	rnf17	99	58.853	ENSLBEG00000014910	rnf17	97	58.640	Labrus_bergylta
ENSXMAG00000014747	rnf17	77	33.274	ENSLACG00000000323	RNF17	97	33.274	Latimeria_chalumnae
ENSXMAG00000014747	rnf17	98	35.557	ENSLOCG00000010768	rnf17	89	35.537	Lepisosteus_oculatus
ENSXMAG00000014747	rnf17	96	31.081	ENSMFAG00000032388	RNF17	83	33.682	Macaca_fascicularis
ENSXMAG00000014747	rnf17	96	31.081	ENSMMUG00000014610	RNF17	83	33.682	Macaca_mulatta
ENSXMAG00000014747	rnf17	96	31.081	ENSMNEG00000011234	RNF17	83	33.682	Macaca_nemestrina
ENSXMAG00000014747	rnf17	96	31.054	ENSMLEG00000030227	RNF17	85	30.917	Mandrillus_leucophaeus
ENSXMAG00000014747	rnf17	89	59.755	ENSMAMG00000020403	rnf17	92	59.143	Mastacembelus_armatus
ENSXMAG00000014747	rnf17	99	62.534	ENSMZEG00005019166	rnf17	90	62.055	Maylandia_zebra
ENSXMAG00000014747	rnf17	82	37.500	ENSMGAG00000015138	RNF17	94	37.500	Meleagris_gallopavo
ENSXMAG00000014747	rnf17	87	33.629	ENSMAUG00000004788	Rnf17	87	30.774	Mesocricetus_auratus
ENSXMAG00000014747	rnf17	97	30.961	ENSMICG00000010364	RNF17	83	33.100	Microcebus_murinus
ENSXMAG00000014747	rnf17	55	33.848	ENSMOCG00000011818	-	89	33.848	Microtus_ochrogaster
ENSXMAG00000014747	rnf17	83	75.000	ENSMMOG00000019514	rnf17	85	75.000	Mola_mola
ENSXMAG00000014747	rnf17	77	35.798	ENSMODG00000007827	RNF17	84	31.484	Monodelphis_domestica
ENSXMAG00000014747	rnf17	99	58.187	ENSMALG00000016943	rnf17	99	58.046	Monopterus_albus
ENSXMAG00000014747	rnf17	77	34.190	MGP_CAROLIEiJ_G0019337	Rnf17	87	30.838	Mus_caroli
ENSXMAG00000014747	rnf17	77	34.278	ENSMUSG00000000365	Rnf17	87	30.975	Mus_musculus
ENSXMAG00000014747	rnf17	77	34.455	MGP_PahariEiJ_G0030355	Rnf17	67	34.417	Mus_pahari
ENSXMAG00000014747	rnf17	77	34.367	MGP_SPRETEiJ_G0020228	Rnf17	87	31.027	Mus_spretus
ENSXMAG00000014747	rnf17	77	33.930	ENSMPUG00000013305	RNF17	68	33.995	Mustela_putorius_furo
ENSXMAG00000014747	rnf17	77	34.258	ENSMLUG00000003903	RNF17	68	34.113	Myotis_lucifugus
ENSXMAG00000014747	rnf17	77	34.229	ENSNGAG00000013553	Rnf17	86	31.006	Nannospalax_galili
ENSXMAG00000014747	rnf17	82	71.875	ENSNBRG00000012006	rnf17	87	61.180	Neolamprologus_brichardi
ENSXMAG00000014747	rnf17	97	31.210	ENSNLEG00000013780	RNF17	84	33.563	Nomascus_leucogenys
ENSXMAG00000014747	rnf17	99	61.565	ENSONIG00000015746	rnf17	97	61.724	Oreochromis_niloticus
ENSXMAG00000014747	rnf17	77	34.501	ENSOCUG00000007384	RNF17	67	34.358	Oryctolagus_cuniculus
ENSXMAG00000014747	rnf17	92	55.122	ENSORLG00000012818	rnf17	93	55.199	Oryzias_latipes
ENSXMAG00000014747	rnf17	99	54.565	ENSORLG00020009879	-	90	54.705	Oryzias_latipes_hni
ENSXMAG00000014747	rnf17	99	54.143	ENSORLG00015013027	-	90	54.213	Oryzias_latipes_hsok
ENSXMAG00000014747	rnf17	90	56.797	ENSOMEG00000009891	rnf17	97	56.670	Oryzias_melastigma
ENSXMAG00000014747	rnf17	77	33.874	ENSOGAG00000014803	RNF17	68	33.574	Otolemur_garnettii
ENSXMAG00000014747	rnf17	77	34.467	ENSOARG00000014641	RNF17	68	34.319	Ovis_aries
ENSXMAG00000014747	rnf17	77	34.480	ENSPPAG00000028779	RNF17	84	34.079	Pan_paniscus
ENSXMAG00000014747	rnf17	97	30.376	ENSPPRG00000009230	RNF17	87	33.750	Panthera_pardus
ENSXMAG00000014747	rnf17	97	30.447	ENSPTIG00000001738	RNF17	87	33.750	Panthera_tigris_altaica
ENSXMAG00000014747	rnf17	77	34.480	ENSPTRG00000005713	RNF17	84	33.675	Pan_troglodytes
ENSXMAG00000014747	rnf17	96	31.184	ENSPANG00000007640	RNF17	83	33.682	Papio_anubis
ENSXMAG00000014747	rnf17	85	43.579	ENSPKIG00000001648	rnf17	95	42.964	Paramormyrops_kingsleyae
ENSXMAG00000014747	rnf17	77	36.098	ENSPSIG00000011245	RNF17	99	36.014	Pelodiscus_sinensis
ENSXMAG00000014747	rnf17	77	34.473	ENSPEMG00000008693	Rnf17	85	31.491	Peromyscus_maniculatus_bairdii
ENSXMAG00000014747	rnf17	63	34.556	ENSPCIG00000009190	-	92	34.399	Phascolarctos_cinereus
ENSXMAG00000014747	rnf17	99	83.243	ENSPFOG00000007124	rnf17	90	83.038	Poecilia_formosa
ENSXMAG00000014747	rnf17	99	85.183	ENSPLAG00000006198	rnf17	90	85.183	Poecilia_latipinna
ENSXMAG00000014747	rnf17	100	89.113	ENSPMEG00000022432	rnf17	100	89.113	Poecilia_mexicana
ENSXMAG00000014747	rnf17	80	89.474	ENSPREG00000001414	rnf17	79	89.474	Poecilia_reticulata
ENSXMAG00000014747	rnf17	97	30.921	ENSPPYG00000005215	RNF17	68	34.011	Pongo_abelii
ENSXMAG00000014747	rnf17	74	47.727	ENSPVAG00000013021	RNF17	70	47.727	Pteropus_vampyrus
ENSXMAG00000014747	rnf17	90	51.971	ENSPNAG00000027505	rnf17	92	52.612	Pygocentrus_nattereri
ENSXMAG00000014747	rnf17	77	33.954	ENSRNOG00000008059	Rnf17	85	31.006	Rattus_norvegicus
ENSXMAG00000014747	rnf17	84	32.571	ENSRBIG00000027010	RNF17	71	32.973	Rhinopithecus_bieti
ENSXMAG00000014747	rnf17	96	31.032	ENSRROG00000022801	RNF17	83	34.091	Rhinopithecus_roxellana
ENSXMAG00000014747	rnf17	77	33.802	ENSSBOG00000021661	RNF17	84	33.560	Saimiri_boliviensis_boliviensis
ENSXMAG00000014747	rnf17	77	35.184	ENSSHAG00000005609	RNF17	85	31.025	Sarcophilus_harrisii
ENSXMAG00000014747	rnf17	77	43.482	ENSSFOG00015023037	rnf17	80	43.312	Scleropages_formosus
ENSXMAG00000014747	rnf17	99	59.536	ENSSMAG00000007429	rnf17	98	59.395	Scophthalmus_maximus
ENSXMAG00000014747	rnf17	98	66.117	ENSSDUG00000013530	rnf17	100	65.759	Seriola_dumerili
ENSXMAG00000014747	rnf17	99	65.242	ENSSLDG00000019577	rnf17	99	64.821	Seriola_lalandi_dorsalis
ENSXMAG00000014747	rnf17	69	33.929	ENSSARG00000003016	RNF17	60	33.333	Sorex_araneus
ENSXMAG00000014747	rnf17	93	33.308	ENSSPUG00000008917	RNF17	89	33.308	Sphenodon_punctatus
ENSXMAG00000014747	rnf17	97	65.224	ENSSPAG00000001925	rnf17	99	65.297	Stegastes_partitus
ENSXMAG00000014747	rnf17	77	33.779	ENSSSCG00000009572	RNF17	82	30.588	Sus_scrofa
ENSXMAG00000014747	rnf17	63	34.745	ENSTGUG00000011267	-	99	34.513	Taeniopygia_guttata
ENSXMAG00000014747	rnf17	97	49.708	ENSTRUG00000015498	rnf17	87	49.416	Takifugu_rubripes
ENSXMAG00000014747	rnf17	77	52.739	ENSTNIG00000015681	rnf17	93	52.676	Tetraodon_nigroviridis
ENSXMAG00000014747	rnf17	63	36.735	ENSTBEG00000000282	RNF17	68	36.735	Tupaia_belangeri
ENSXMAG00000014747	rnf17	63	46.479	ENSVPAG00000011388	RNF17	65	46.479	Vicugna_pacos
ENSXMAG00000014747	rnf17	98	30.084	ENSVVUG00000006226	RNF17	87	30.764	Vulpes_vulpes
ENSXMAG00000014747	rnf17	72	30.151	ENSXETG00000034020	RNF17	90	30.009	Xenopus_tropicalis
ENSXMAG00000014747	rnf17	100	97.325	ENSXCOG00000018295	rnf17	100	97.325	Xiphophorus_couchianus