EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000014770 (Gene tree)
Gene ID: 102229704
Gene Symbol: REXO5
Alias: NEF-sp
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 14750 bases
Position: chr5:28259133-28273882
Accession: 102229704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000014800	RRM_1	PF00076.22	1.8e-13	1	2
ENSXMAP00000014800	RRM_1	PF00076.22	1.8e-13	2	2
ENSXMAP00000041783	RRM_1	PF00076.22	1.8e-13	1	2
ENSXMAP00000041783	RRM_1	PF00076.22	1.8e-13	2	2
ENSXMAP00000014800	RNase_T	PF00929.24	9.7e-09	1	1
ENSXMAP00000041783	RNase_T	PF00929.24	9.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000042573	REXO5-202	6527	-	ENSXMAP00000041783	806 (aa)	-	UPI000C6D61DE
ENSXMAT00000014820	REXO5-201	6355	XM_005813329	ENSXMAP00000014800	806 (aa)	XP_005813386	M4AK06

Gene Model

Click here to download ENSXMAG00000014770's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000014770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000014770	REXO5	92	33.714	ENSG00000005189	REXO5	97	59.420	Homo_sapiens
ENSXMAG00000014770	REXO5	98	62.453	ENSAPOG00000008514	REXO5	99	62.039	Acanthochromis_polyacanthus
ENSXMAG00000014770	REXO5	98	32.575	ENSAMEG00000006178	REXO5	97	32.575	Ailuropoda_melanoleuca
ENSXMAG00000014770	REXO5	50	62.857	ENSAOCG00000003481	-	81	62.857	Amphiprion_ocellaris
ENSXMAG00000014770	REXO5	98	61.076	ENSAPEG00000010627	REXO5	99	60.736	Amphiprion_percula
ENSXMAG00000014770	REXO5	75	64.590	ENSATEG00000004682	REXO5	97	65.650	Anabas_testudineus
ENSXMAG00000014770	REXO5	94	33.417	ENSAPLG00000015740	REXO5	99	33.417	Anas_platyrhynchos
ENSXMAG00000014770	REXO5	98	32.843	ENSACAG00000009744	REXO5	97	32.843	Anolis_carolinensis
ENSXMAG00000014770	REXO5	98	32.289	ENSANAG00000034379	REXO5	97	32.289	Aotus_nancymaae
ENSXMAG00000014770	REXO5	80	53.870	ENSACLG00000004778	REXO5	100	53.870	Astatotilapia_calliptera
ENSXMAG00000014770	REXO5	75	38.026	ENSBTAG00000006449	REXO5	77	38.026	Bos_taurus
ENSXMAG00000014770	REXO5	74	37.662	ENSCJAG00000009363	REXO5	75	41.083	Callithrix_jacchus
ENSXMAG00000014770	REXO5	95	32.797	ENSCAFG00000017924	REXO5	98	32.286	Canis_familiaris
ENSXMAG00000014770	REXO5	74	37.055	ENSCAFG00020021846	REXO5	79	37.055	Canis_lupus_dingo
ENSXMAG00000014770	REXO5	99	32.974	ENSCHIG00000022443	REXO5	98	33.333	Capra_hircus
ENSXMAG00000014770	REXO5	98	31.611	ENSCPOG00000008940	REXO5	91	36.466	Cavia_porcellus
ENSXMAG00000014770	REXO5	74	37.236	ENSCCAG00000034936	REXO5	77	37.236	Cebus_capucinus
ENSXMAG00000014770	REXO5	98	33.094	ENSCATG00000044063	REXO5	97	33.094	Cercocebus_atys
ENSXMAG00000014770	REXO5	74	36.791	ENSCLAG00000008033	REXO5	73	36.791	Chinchilla_lanigera
ENSXMAG00000014770	REXO5	98	32.974	ENSCSAG00000007562	REXO5	97	32.974	Chlorocebus_sabaeus
ENSXMAG00000014770	REXO5	99	32.429	ENSCPBG00000019062	REXO5	98	32.547	Chrysemys_picta_bellii
ENSXMAG00000014770	REXO5	98	32.974	ENSCANG00000035776	REXO5	97	32.974	Colobus_angolensis_palliatus
ENSXMAG00000014770	REXO5	92	32.330	ENSCGRG00001016179	-	92	32.330	Cricetulus_griseus_chok1gshd
ENSXMAG00000014770	REXO5	84	44.106	ENSCGRG00000010868	-	88	44.106	Cricetulus_griseus_crigri
ENSXMAG00000014770	REXO5	71	52.422	ENSCSEG00000002060	-	99	52.941	Cynoglossus_semilaevis
ENSXMAG00000014770	REXO5	53	62.500	ENSCVAG00000014887	-	84	62.500	Cyprinodon_variegatus
ENSXMAG00000014770	REXO5	69	38.908	ENSEASG00005007266	REXO5	90	41.247	Equus_asinus_asinus
ENSXMAG00000014770	REXO5	74	37.662	ENSECAG00000018769	REXO5	69	37.662	Equus_caballus
ENSXMAG00000014770	REXO5	55	49.240	ENSEEUG00000003572	REXO5	81	49.240	Erinaceus_europaeus
ENSXMAG00000014770	REXO5	98	33.130	ENSFCAG00000015160	REXO5	97	33.130	Felis_catus
ENSXMAG00000014770	REXO5	92	34.878	ENSFALG00000014026	REXO5	97	34.749	Ficedula_albicollis
ENSXMAG00000014770	REXO5	99	68.719	ENSFHEG00000013388	REXO5	99	68.719	Fundulus_heteroclitus
ENSXMAG00000014770	REXO5	92	32.817	ENSGALG00000002239	REXO5	92	32.687	Gallus_gallus
ENSXMAG00000014770	REXO5	99	85.732	ENSGAFG00000011045	REXO5	98	86.104	Gambusia_affinis
ENSXMAG00000014770	REXO5	52	59.589	ENSGACG00000019507	-	96	59.589	Gasterosteus_aculeatus
ENSXMAG00000014770	REXO5	99	32.155	ENSGAGG00000008242	REXO5	98	32.155	Gopherus_agassizii
ENSXMAG00000014770	REXO5	92	33.714	ENSGGOG00000004539	REXO5	91	33.714	Gorilla_gorilla
ENSXMAG00000014770	REXO5	99	54.827	ENSHBUG00000017976	REXO5	99	54.827	Haplochromis_burtoni
ENSXMAG00000014770	REXO5	62	36.224	ENSHGLG00000012652	REXO5	76	36.224	Heterocephalus_glaber_female
ENSXMAG00000014770	REXO5	74	35.645	ENSHGLG00100013255	REXO5	96	38.202	Heterocephalus_glaber_male
ENSXMAG00000014770	REXO5	66	52.214	ENSHCOG00000008648	REXO5	94	52.963	Hippocampus_comes
ENSXMAG00000014770	REXO5	67	39.714	ENSSTOG00000007071	REXO5	80	39.714	Ictidomys_tridecemlineatus
ENSXMAG00000014770	REXO5	67	39.556	ENSJJAG00000023821	-	70	39.556	Jaculus_jaculus
ENSXMAG00000014770	REXO5	99	63.164	ENSKMAG00000009488	REXO5	99	63.164	Kryptolebias_marmoratus
ENSXMAG00000014770	REXO5	99	57.927	ENSLBEG00000009276	REXO5	99	57.927	Labrus_bergylta
ENSXMAG00000014770	REXO5	79	37.631	ENSLACG00000001758	REXO5	99	37.631	Latimeria_chalumnae
ENSXMAG00000014770	REXO5	74	37.092	ENSLAFG00000006157	REXO5	78	37.092	Loxodonta_africana
ENSXMAG00000014770	REXO5	98	32.974	ENSMFAG00000036613	REXO5	97	32.974	Macaca_fascicularis
ENSXMAG00000014770	REXO5	98	33.054	ENSMMUG00000016748	REXO5	97	33.054	Macaca_mulatta
ENSXMAG00000014770	REXO5	98	32.974	ENSMNEG00000045028	REXO5	97	32.974	Macaca_nemestrina
ENSXMAG00000014770	REXO5	98	33.094	ENSMLEG00000029851	REXO5	97	33.094	Mandrillus_leucophaeus
ENSXMAG00000014770	REXO5	99	59.328	ENSMAMG00000006915	REXO5	95	59.328	Mastacembelus_armatus
ENSXMAG00000014770	REXO5	99	54.084	ENSMZEG00005013657	REXO5	99	54.084	Maylandia_zebra
ENSXMAG00000014770	REXO5	92	33.718	ENSMGAG00000010369	REXO5	97	33.504	Meleagris_gallopavo
ENSXMAG00000014770	REXO5	98	32.173	ENSMICG00000014886	REXO5	97	32.173	Microcebus_murinus
ENSXMAG00000014770	REXO5	50	39.467	ENSMOCG00000010062	-	88	39.467	Microtus_ochrogaster
ENSXMAG00000014770	REXO5	51	73.810	ENSMMOG00000011330	-	96	52.239	Mola_mola
ENSXMAG00000014770	REXO5	99	32.394	ENSMODG00000007059	REXO5	93	32.394	Monodelphis_domestica
ENSXMAG00000014770	REXO5	98	30.255	MGP_CAROLIEiJ_G0030385	-	97	30.170	Mus_caroli
ENSXMAG00000014770	REXO5	98	30.467	ENSMUSG00000030924	Rexo5	97	30.467	Mus_musculus
ENSXMAG00000014770	REXO5	92	31.079	MGP_SPRETEiJ_G0031499	-	91	31.079	Mus_spretus
ENSXMAG00000014770	REXO5	98	33.214	ENSMPUG00000013643	REXO5	97	33.214	Mustela_putorius_furo
ENSXMAG00000014770	REXO5	92	33.201	ENSNGAG00000002025	-	90	39.563	Nannospalax_galili
ENSXMAG00000014770	REXO5	70	47.513	ENSNBRG00000006877	REXO5	92	47.513	Neolamprologus_brichardi
ENSXMAG00000014770	REXO5	74	37.785	ENSNLEG00000012334	REXO5	77	37.785	Nomascus_leucogenys
ENSXMAG00000014770	REXO5	92	31.532	ENSMEUG00000015298	REXO5	97	31.532	Notamacropus_eugenii
ENSXMAG00000014770	REXO5	63	37.922	ENSOPRG00000011398	REXO5	66	37.922	Ochotona_princeps
ENSXMAG00000014770	REXO5	99	53.837	ENSONIG00000000148	REXO5	99	56.357	Oreochromis_niloticus
ENSXMAG00000014770	REXO5	92	34.395	ENSOANG00000014291	REXO5	98	34.522	Ornithorhynchus_anatinus
ENSXMAG00000014770	REXO5	98	32.195	ENSOCUG00000009913	REXO5	95	32.195	Oryctolagus_cuniculus
ENSXMAG00000014770	REXO5	99	58.416	ENSORLG00000009738	REXO5	99	58.787	Oryzias_latipes
ENSXMAG00000014770	REXO5	99	58.540	ENSORLG00020010270	REXO5	99	58.911	Oryzias_latipes_hni
ENSXMAG00000014770	REXO5	99	58.045	ENSORLG00015009678	REXO5	99	58.416	Oryzias_latipes_hsok
ENSXMAG00000014770	REXO5	98	57.143	ENSOMEG00000019491	REXO5	99	56.877	Oryzias_melastigma
ENSXMAG00000014770	REXO5	75	36.422	ENSOGAG00000011564	REXO5	78	36.422	Otolemur_garnettii
ENSXMAG00000014770	REXO5	99	32.854	ENSOARG00000013401	REXO5	99	33.055	Ovis_aries
ENSXMAG00000014770	REXO5	92	33.588	ENSPPAG00000035005	REXO5	91	33.588	Pan_paniscus
ENSXMAG00000014770	REXO5	98	32.324	ENSPPRG00000022345	REXO5	97	32.324	Panthera_pardus
ENSXMAG00000014770	REXO5	98	32.812	ENSPTIG00000012096	REXO5	97	32.812	Panthera_tigris_altaica
ENSXMAG00000014770	REXO5	92	33.758	ENSPTRG00000007851	REXO5	91	33.758	Pan_troglodytes
ENSXMAG00000014770	REXO5	98	33.013	ENSPANG00000006898	REXO5	97	33.013	Papio_anubis
ENSXMAG00000014770	REXO5	97	40.741	ENSPKIG00000014406	REXO5	99	40.741	Paramormyrops_kingsleyae
ENSXMAG00000014770	REXO5	98	33.213	ENSPSIG00000012172	REXO5	97	33.213	Pelodiscus_sinensis
ENSXMAG00000014770	REXO5	86	45.082	ENSPCIG00000029238	-	95	32.972	Phascolarctos_cinereus
ENSXMAG00000014770	REXO5	100	90.235	ENSPFOG00000012767	REXO5	100	90.606	Poecilia_formosa
ENSXMAG00000014770	REXO5	100	89.988	ENSPLAG00000006408	REXO5	100	90.358	Poecilia_latipinna
ENSXMAG00000014770	REXO5	100	89.988	ENSPMEG00000007726	REXO5	100	90.358	Poecilia_mexicana
ENSXMAG00000014770	REXO5	99	88.848	ENSPREG00000000146	REXO5	100	88.848	Poecilia_reticulata
ENSXMAG00000014770	REXO5	98	32.695	ENSPPYG00000007163	REXO5	97	32.695	Pongo_abelii
ENSXMAG00000014770	REXO5	68	37.567	ENSPCAG00000006265	REXO5	99	32.296	Procavia_capensis
ENSXMAG00000014770	REXO5	97	32.472	ENSPCOG00000018775	REXO5	95	32.472	Propithecus_coquereli
ENSXMAG00000014770	REXO5	92	34.827	ENSPVAG00000003293	REXO5	97	34.699	Pteropus_vampyrus
ENSXMAG00000014770	REXO5	83	49.852	ENSPNYG00000006922	REXO5	94	54.921	Pundamilia_nyererei
ENSXMAG00000014770	REXO5	98	39.632	ENSPNAG00000018866	-	99	39.632	Pygocentrus_nattereri
ENSXMAG00000014770	REXO5	75	33.549	ENSRNOG00000014513	Rexo5	79	33.549	Rattus_norvegicus
ENSXMAG00000014770	REXO5	98	33.454	ENSRBIG00000035163	REXO5	86	33.333	Rhinopithecus_bieti
ENSXMAG00000014770	REXO5	98	33.333	ENSRROG00000034741	REXO5	97	33.333	Rhinopithecus_roxellana
ENSXMAG00000014770	REXO5	68	38.230	ENSSBOG00000029650	REXO5	74	38.689	Saimiri_boliviensis_boliviensis
ENSXMAG00000014770	REXO5	98	32.667	ENSSHAG00000005042	REXO5	98	32.660	Sarcophilus_harrisii
ENSXMAG00000014770	REXO5	98	40.700	ENSSFOG00015007581	REXO5	98	40.700	Scleropages_formosus
ENSXMAG00000014770	REXO5	99	58.809	ENSSMAG00000000709	REXO5	99	58.931	Scophthalmus_maximus
ENSXMAG00000014770	REXO5	98	60.924	ENSSDUG00000014528	REXO5	100	60.048	Seriola_dumerili
ENSXMAG00000014770	REXO5	98	60.902	ENSSLDG00000007641	REXO5	98	60.074	Seriola_lalandi_dorsalis
ENSXMAG00000014770	REXO5	55	67.647	ENSSPAG00000007050	-	85	66.667	Stegastes_partitus
ENSXMAG00000014770	REXO5	74	37.987	ENSSSCG00000007855	REXO5	97	33.014	Sus_scrofa
ENSXMAG00000014770	REXO5	92	34.699	ENSTGUG00000009219	REXO5	97	34.571	Taeniopygia_guttata
ENSXMAG00000014770	REXO5	99	57.108	ENSTRUG00000015295	-	97	57.108	Takifugu_rubripes
ENSXMAG00000014770	REXO5	65	34.124	ENSTBEG00000008797	REXO5	74	33.220	Tupaia_belangeri
ENSXMAG00000014770	REXO5	98	33.535	ENSTTRG00000016439	REXO5	97	33.535	Tursiops_truncatus
ENSXMAG00000014770	REXO5	87	32.236	ENSUAMG00000017756	REXO5	98	32.236	Ursus_americanus
ENSXMAG00000014770	REXO5	98	32.339	ENSVVUG00000023257	REXO5	94	32.797	Vulpes_vulpes
ENSXMAG00000014770	REXO5	94	33.248	ENSXETG00000016735	rexo5	97	33.376	Xenopus_tropicalis
ENSXMAG00000014770	REXO5	93	71.147	ENSXCOG00000015997	REXO5	98	71.147	Xiphophorus_couchianus