EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015059 (Gene tree)
Gene ID: 102231590
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 35200 bases
Position: chr4:12891510-12926709
Accession: 102231590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015093	Urb2	PF10441.9	3.2e-18	1	1
ENSXMAP00000029654	Urb2	PF10441.9	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015113	-	6547	XM_023332350	ENSXMAP00000015093	1577 (aa)	XP_023188118	M4AKU9
ENSXMAT00000022000	-	6742	-	ENSXMAP00000029654	1591 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000015059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015059	urb2	99	33.824	ENSG00000135763	URB2	96	58.333	Homo_sapiens
ENSXMAG00000015059	urb2	91	62.665	ENSAPOG00000000608	urb2	100	62.533	Acanthochromis_polyacanthus
ENSXMAG00000015059	urb2	100	34.094	ENSAMEG00000009206	URB2	100	34.157	Ailuropoda_melanoleuca
ENSXMAG00000015059	urb2	100	64.646	ENSAOCG00000019961	urb2	100	64.766	Amphiprion_ocellaris
ENSXMAG00000015059	urb2	100	64.766	ENSAPEG00000005263	urb2	100	64.886	Amphiprion_percula
ENSXMAG00000015059	urb2	100	61.589	ENSATEG00000020930	urb2	100	61.352	Anabas_testudineus
ENSXMAG00000015059	urb2	97	35.714	ENSAPLG00000002998	URB2	99	35.593	Anas_platyrhynchos
ENSXMAG00000015059	urb2	99	37.446	ENSACAG00000001285	URB2	99	37.446	Anolis_carolinensis
ENSXMAG00000015059	urb2	99	34.209	ENSANAG00000033963	URB2	99	34.087	Aotus_nancymaae
ENSXMAG00000015059	urb2	91	59.289	ENSACLG00000009254	urb2	100	59.552	Astatotilapia_calliptera
ENSXMAG00000015059	urb2	99	39.888	ENSAMXG00000003474	urb2	99	40.074	Astyanax_mexicanus
ENSXMAG00000015059	urb2	100	34.451	ENSBTAG00000010180	URB2	100	34.680	Bos_taurus
ENSXMAG00000015059	urb2	95	56.291	ENSCJAG00000010968	URB2	99	56.291	Callithrix_jacchus
ENSXMAG00000015059	urb2	99	33.933	ENSCAFG00000012118	URB2	99	34.097	Canis_familiaris
ENSXMAG00000015059	urb2	93	32.776	ENSCAFG00020027217	URB2	98	32.955	Canis_lupus_dingo
ENSXMAG00000015059	urb2	100	34.470	ENSCHIG00000014513	URB2	100	33.929	Capra_hircus
ENSXMAG00000015059	urb2	100	34.708	ENSTSYG00000006924	URB2	100	34.892	Carlito_syrichta
ENSXMAG00000015059	urb2	61	38.736	ENSCPOG00000020777	-	99	38.736	Cavia_porcellus
ENSXMAG00000015059	urb2	99	34.033	ENSCCAG00000023932	URB2	99	34.033	Cebus_capucinus
ENSXMAG00000015059	urb2	99	34.052	ENSCATG00000043366	URB2	99	34.215	Cercocebus_atys
ENSXMAG00000015059	urb2	99	35.382	ENSCLAG00000006268	URB2	99	35.608	Chinchilla_lanigera
ENSXMAG00000015059	urb2	99	33.681	ENSCSAG00000010599	URB2	99	33.844	Chlorocebus_sabaeus
ENSXMAG00000015059	urb2	69	41.639	ENSCHOG00000010163	URB2	69	41.639	Choloepus_hoffmanni
ENSXMAG00000015059	urb2	99	37.714	ENSCPBG00000006191	URB2	99	37.653	Chrysemys_picta_bellii
ENSXMAG00000015059	urb2	99	34.256	ENSCANG00000023711	URB2	99	34.419	Colobus_angolensis_palliatus
ENSXMAG00000015059	urb2	99	35.127	ENSCGRG00001009591	Urb2	99	35.145	Cricetulus_griseus_chok1gshd
ENSXMAG00000015059	urb2	99	35.127	ENSCGRG00000011259	Urb2	99	35.145	Cricetulus_griseus_crigri
ENSXMAG00000015059	urb2	100	52.526	ENSCSEG00000000299	urb2	100	52.526	Cynoglossus_semilaevis
ENSXMAG00000015059	urb2	100	75.871	ENSCVAG00000011011	urb2	100	76.182	Cyprinodon_variegatus
ENSXMAG00000015059	urb2	100	42.392	ENSDARG00000003217	urb2	99	68.000	Danio_rerio
ENSXMAG00000015059	urb2	97	32.607	ENSDNOG00000043064	URB2	99	33.119	Dasypus_novemcinctus
ENSXMAG00000015059	urb2	99	34.866	ENSDORG00000014975	Urb2	99	34.866	Dipodomys_ordii
ENSXMAG00000015059	urb2	95	38.028	ENSETEG00000002869	URB2	95	38.028	Echinops_telfairi
ENSXMAG00000015059	urb2	100	34.608	ENSEASG00005012060	URB2	100	34.772	Equus_asinus_asinus
ENSXMAG00000015059	urb2	93	57.241	ENSECAG00000012338	URB2	100	57.241	Equus_caballus
ENSXMAG00000015059	urb2	92	51.748	ENSEEUG00000002669	URB2	92	51.748	Erinaceus_europaeus
ENSXMAG00000015059	urb2	100	46.732	ENSELUG00000014647	urb2	100	46.732	Esox_lucius
ENSXMAG00000015059	urb2	99	33.952	ENSFCAG00000007662	URB2	99	34.116	Felis_catus
ENSXMAG00000015059	urb2	99	36.164	ENSFALG00000003385	URB2	99	35.985	Ficedula_albicollis
ENSXMAG00000015059	urb2	99	34.653	ENSFDAG00000021079	URB2	99	34.839	Fukomys_damarensis
ENSXMAG00000015059	urb2	100	76.303	ENSFHEG00000010357	urb2	100	76.489	Fundulus_heteroclitus
ENSXMAG00000015059	urb2	99	52.206	ENSGMOG00000012459	urb2	100	51.896	Gadus_morhua
ENSXMAG00000015059	urb2	99	36.474	ENSGALG00000011101	URB2	99	36.258	Gallus_gallus
ENSXMAG00000015059	urb2	100	60.299	ENSGACG00000016179	urb2	100	60.236	Gasterosteus_aculeatus
ENSXMAG00000015059	urb2	99	37.768	ENSGAGG00000021879	URB2	99	37.768	Gopherus_agassizii
ENSXMAG00000015059	urb2	99	34.012	ENSGGOG00000025643	URB2	99	34.032	Gorilla_gorilla
ENSXMAG00000015059	urb2	100	61.008	ENSHBUG00000018469	urb2	100	61.008	Haplochromis_burtoni
ENSXMAG00000015059	urb2	97	34.089	ENSHGLG00000016561	URB2	99	34.089	Heterocephalus_glaber_female
ENSXMAG00000015059	urb2	99	34.398	ENSHGLG00100001838	URB2	99	34.398	Heterocephalus_glaber_male
ENSXMAG00000015059	urb2	100	40.074	ENSIPUG00000020315	urb2	100	39.608	Ictalurus_punctatus
ENSXMAG00000015059	urb2	99	34.723	ENSSTOG00000025323	URB2	99	34.682	Ictidomys_tridecemlineatus
ENSXMAG00000015059	urb2	99	34.895	ENSJJAG00000011998	Urb2	99	34.772	Jaculus_jaculus
ENSXMAG00000015059	urb2	100	66.424	ENSKMAG00000020129	urb2	100	66.727	Kryptolebias_marmoratus
ENSXMAG00000015059	urb2	99	37.815	ENSLACG00000002038	URB2	99	37.715	Latimeria_chalumnae
ENSXMAG00000015059	urb2	99	42.671	ENSLOCG00000015462	urb2	99	42.795	Lepisosteus_oculatus
ENSXMAG00000015059	urb2	99	33.994	ENSLAFG00000012484	URB2	100	34.118	Loxodonta_africana
ENSXMAG00000015059	urb2	99	33.908	ENSMFAG00000039905	URB2	99	34.071	Macaca_fascicularis
ENSXMAG00000015059	urb2	99	33.908	ENSMMUG00000009509	URB2	99	34.071	Macaca_mulatta
ENSXMAG00000015059	urb2	99	33.846	ENSMNEG00000038762	URB2	99	34.010	Macaca_nemestrina
ENSXMAG00000015059	urb2	99	33.990	ENSMLEG00000043252	URB2	99	34.154	Mandrillus_leucophaeus
ENSXMAG00000015059	urb2	100	59.286	ENSMAMG00000020365	urb2	100	59.286	Mastacembelus_armatus
ENSXMAG00000015059	urb2	100	60.781	ENSMZEG00005011027	urb2	100	60.901	Maylandia_zebra
ENSXMAG00000015059	urb2	94	33.611	ENSMGAG00000012073	URB2	98	33.929	Meleagris_gallopavo
ENSXMAG00000015059	urb2	95	53.691	ENSMAUG00000017980	Urb2	99	53.691	Mesocricetus_auratus
ENSXMAG00000015059	urb2	100	34.618	ENSMICG00000033302	URB2	100	34.783	Microcebus_murinus
ENSXMAG00000015059	urb2	99	34.622	ENSMOCG00000020369	Urb2	99	34.852	Microtus_ochrogaster
ENSXMAG00000015059	urb2	100	61.452	ENSMALG00000006529	urb2	100	61.392	Monopterus_albus
ENSXMAG00000015059	urb2	99	34.398	ENSMUSG00000031976	Urb2	99	34.542	Mus_musculus
ENSXMAG00000015059	urb2	99	34.363	ENSMPUG00000012438	URB2	99	34.549	Mustela_putorius_furo
ENSXMAG00000015059	urb2	99	34.932	ENSNGAG00000016524	Urb2	99	35.127	Nannospalax_galili
ENSXMAG00000015059	urb2	99	33.725	ENSNLEG00000014450	URB2	99	33.889	Nomascus_leucogenys
ENSXMAG00000015059	urb2	90	42.922	ENSMEUG00000016434	URB2	92	42.922	Notamacropus_eugenii
ENSXMAG00000015059	urb2	88	78.571	ENSOPRG00000009906	URB2	86	78.571	Ochotona_princeps
ENSXMAG00000015059	urb2	99	34.897	ENSODEG00000005593	URB2	99	35.166	Octodon_degus
ENSXMAG00000015059	urb2	100	61.212	ENSONIG00000017078	urb2	100	61.462	Oreochromis_niloticus
ENSXMAG00000015059	urb2	99	33.876	ENSOANG00000013732	URB2	99	34.043	Ornithorhynchus_anatinus
ENSXMAG00000015059	urb2	100	34.737	ENSOCUG00000010700	URB2	100	34.901	Oryctolagus_cuniculus
ENSXMAG00000015059	urb2	100	59.915	ENSORLG00000010915	urb2	100	59.976	Oryzias_latipes
ENSXMAG00000015059	urb2	100	60.049	ENSORLG00020003361	urb2	100	60.110	Oryzias_latipes_hni
ENSXMAG00000015059	urb2	100	59.585	ENSORLG00015001534	urb2	100	59.585	Oryzias_latipes_hsok
ENSXMAG00000015059	urb2	100	61.067	ENSOMEG00000010076	urb2	100	61.152	Oryzias_melastigma
ENSXMAG00000015059	urb2	100	33.684	ENSOGAG00000003021	URB2	100	33.993	Otolemur_garnettii
ENSXMAG00000015059	urb2	100	34.280	ENSOARG00000003102	URB2	100	34.152	Ovis_aries
ENSXMAG00000015059	urb2	99	33.869	ENSPPAG00000040629	URB2	99	33.972	Pan_paniscus
ENSXMAG00000015059	urb2	99	34.014	ENSPPRG00000012767	URB2	99	34.178	Panthera_pardus
ENSXMAG00000015059	urb2	99	34.199	ENSPTIG00000012577	URB2	99	75.000	Panthera_tigris_altaica
ENSXMAG00000015059	urb2	99	33.869	ENSPTRG00000002092	URB2	99	34.033	Pan_troglodytes
ENSXMAG00000015059	urb2	99	33.005	ENSPANG00000002245	URB2	99	33.169	Papio_anubis
ENSXMAG00000015059	urb2	99	41.651	ENSPKIG00000005787	urb2	99	41.579	Paramormyrops_kingsleyae
ENSXMAG00000015059	urb2	99	37.148	ENSPSIG00000002690	URB2	99	37.087	Pelodiscus_sinensis
ENSXMAG00000015059	urb2	96	33.312	ENSPEMG00000019551	Urb2	100	33.527	Peromyscus_maniculatus_bairdii
ENSXMAG00000015059	urb2	99	34.163	ENSPCIG00000030071	URB2	99	34.599	Phascolarctos_cinereus
ENSXMAG00000015059	urb2	100	90.996	ENSPFOG00000014330	urb2	100	90.996	Poecilia_formosa
ENSXMAG00000015059	urb2	100	90.932	ENSPLAG00000014654	urb2	100	90.932	Poecilia_latipinna
ENSXMAG00000015059	urb2	100	91.122	ENSPMEG00000012356	urb2	100	91.122	Poecilia_mexicana
ENSXMAG00000015059	urb2	100	92.454	ENSPREG00000010268	urb2	100	92.454	Poecilia_reticulata
ENSXMAG00000015059	urb2	100	33.785	ENSPPYG00000000123	URB2	100	34.032	Pongo_abelii
ENSXMAG00000015059	urb2	100	34.858	ENSPCOG00000023537	URB2	100	35.083	Propithecus_coquereli
ENSXMAG00000015059	urb2	99	32.234	ENSPVAG00000002108	URB2	99	32.242	Pteropus_vampyrus
ENSXMAG00000015059	urb2	91	59.420	ENSPNYG00000016840	urb2	100	59.684	Pundamilia_nyererei
ENSXMAG00000015059	urb2	99	41.228	ENSPNAG00000013684	urb2	99	41.187	Pygocentrus_nattereri
ENSXMAG00000015059	urb2	99	34.331	ENSRNOG00000026853	Urb2	97	34.476	Rattus_norvegicus
ENSXMAG00000015059	urb2	99	33.805	ENSRBIG00000037937	URB2	99	33.969	Rhinopithecus_bieti
ENSXMAG00000015059	urb2	99	33.868	ENSRROG00000039854	URB2	99	34.032	Rhinopithecus_roxellana
ENSXMAG00000015059	urb2	99	34.014	ENSSBOG00000023055	URB2	99	33.890	Saimiri_boliviensis_boliviensis
ENSXMAG00000015059	urb2	99	34.286	ENSSHAG00000014735	URB2	99	34.286	Sarcophilus_harrisii
ENSXMAG00000015059	urb2	97	41.270	ENSSFOG00015015432	urb2	98	41.508	Scleropages_formosus
ENSXMAG00000015059	urb2	91	59.961	ENSSMAG00000004984	urb2	100	59.961	Scophthalmus_maximus
ENSXMAG00000015059	urb2	100	62.478	ENSSDUG00000000902	urb2	100	62.772	Seriola_dumerili
ENSXMAG00000015059	urb2	99	36.280	ENSSPUG00000018549	URB2	99	36.707	Sphenodon_punctatus
ENSXMAG00000015059	urb2	100	65.181	ENSSPAG00000013632	urb2	100	65.181	Stegastes_partitus
ENSXMAG00000015059	urb2	100	34.916	ENSSSCG00000010186	URB2	100	34.845	Sus_scrofa
ENSXMAG00000015059	urb2	99	36.069	ENSTGUG00000009990	URB2	99	36.069	Taeniopygia_guttata
ENSXMAG00000015059	urb2	100	53.417	ENSTRUG00000008173	urb2	100	53.417	Takifugu_rubripes
ENSXMAG00000015059	urb2	100	53.193	ENSTNIG00000017689	urb2	100	53.520	Tetraodon_nigroviridis
ENSXMAG00000015059	urb2	95	78.571	ENSTTRG00000014864	URB2	95	78.571	Tursiops_truncatus
ENSXMAG00000015059	urb2	100	34.155	ENSUAMG00000015022	URB2	100	34.219	Ursus_americanus
ENSXMAG00000015059	urb2	100	34.094	ENSUMAG00000004728	URB2	100	34.157	Ursus_maritimus
ENSXMAG00000015059	urb2	53	57.971	ENSVPAG00000001750	-	52	57.971	Vicugna_pacos
ENSXMAG00000015059	urb2	99	34.057	ENSVVUG00000006747	URB2	99	34.220	Vulpes_vulpes
ENSXMAG00000015059	urb2	99	32.883	ENSXETG00000023331	urb2	99	32.883	Xenopus_tropicalis