EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015213 (Gene tree)
Gene ID: 102223855
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 23676 bases
Position: chr10:8364113-8387788
Accession: 102223855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015269	RNA_pol_Rpb1_5	PF04998.17	2.8e-88	1	1
ENSXMAP00000033947	RNA_pol_Rpb1_5	PF04998.17	3e-88	1	1
ENSXMAP00000040015	RNA_pol_Rpb1_5	PF04998.17	3.5e-84	1	1
ENSXMAP00000040015	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSXMAP00000015269	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSXMAP00000033947	RNA_pol_Rpb1_4	PF05000.17	1.2e-31	1	1
ENSXMAP00000040015	RNA_pol_Rpb1_2	PF00623.20	4.8e-73	1	1
ENSXMAP00000015269	RNA_pol_Rpb1_2	PF00623.20	5.1e-73	1	1
ENSXMAP00000033947	RNA_pol_Rpb1_2	PF00623.20	5.2e-73	1	1
ENSXMAP00000040015	RNA_pol_Rpb1_3	PF04983.18	3e-40	1	1
ENSXMAP00000015269	RNA_pol_Rpb1_3	PF04983.18	3.1e-40	1	1
ENSXMAP00000033947	RNA_pol_Rpb1_3	PF04983.18	3.3e-40	1	1
ENSXMAP00000033947	RNA_pol_Rpb1_1	PF04997.12	2.9e-93	1	1
ENSXMAP00000040015	RNA_pol_Rpb1_1	PF04997.12	1e-91	1	1
ENSXMAP00000015269	RNA_pol_Rpb1_1	PF04997.12	1.1e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000021925	-	5520	-	ENSXMAP00000040015	1305 (aa)	-	-
ENSXMAT00000015290	-	5257	-	ENSXMAP00000015269	1348 (aa)	-	M4ALC5
ENSXMAT00000026020	-	4173	XM_023341327	ENSXMAP00000033947	1390 (aa)	XP_023197095	UPI000293A3BC

Gene Model

Click here to download ENSXMAG00000015213's gene model file

Pathways

Pathway ID	Pathway Name	Source
xma03020	RNA polymerase	KEGG
xma04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015213	polr3a	100	90.000	ENSG00000148606	POLR3A	100	90.000	Homo_sapiens
ENSXMAG00000015213	polr3a	65	92.317	ENSAPOG00000022727	polr3a	99	92.451	Acanthochromis_polyacanthus
ENSXMAG00000015213	polr3a	100	89.878	ENSAMEG00000017801	POLR3A	100	89.878	Ailuropoda_melanoleuca
ENSXMAG00000015213	polr3a	98	96.181	ENSACIG00000024504	polr3a	97	96.077	Amphilophus_citrinellus
ENSXMAG00000015213	polr3a	100	92.446	ENSAOCG00000003949	-	100	92.446	Amphiprion_ocellaris
ENSXMAG00000015213	polr3a	100	95.827	ENSAOCG00000002071	polr3a	100	95.827	Amphiprion_ocellaris
ENSXMAG00000015213	polr3a	100	95.827	ENSAPEG00000013351	polr3a	100	95.827	Amphiprion_percula
ENSXMAG00000015213	polr3a	100	95.612	ENSAPEG00000001966	-	100	95.612	Amphiprion_percula
ENSXMAG00000015213	polr3a	100	95.683	ENSATEG00000023277	polr3a	100	95.683	Anabas_testudineus
ENSXMAG00000015213	polr3a	99	90.473	ENSAPLG00000015878	POLR3A	99	90.400	Anas_platyrhynchos
ENSXMAG00000015213	polr3a	98	89.344	ENSACAG00000007985	POLR3A	99	89.458	Anolis_carolinensis
ENSXMAG00000015213	polr3a	100	87.347	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSXMAG00000015213	polr3a	100	95.683	ENSACLG00000005914	polr3a	100	95.683	Astatotilapia_calliptera
ENSXMAG00000015213	polr3a	99	89.265	ENSAMXG00000018852	polr3a	99	89.265	Astyanax_mexicanus
ENSXMAG00000015213	polr3a	100	89.928	ENSBTAG00000013259	POLR3A	100	89.928	Bos_taurus
ENSXMAG00000015213	polr3a	99	56.541	WBGene00004411	rpc-1	99	56.927	Caenorhabditis_elegans
ENSXMAG00000015213	polr3a	100	89.856	ENSCJAG00000001015	POLR3A	100	89.856	Callithrix_jacchus
ENSXMAG00000015213	polr3a	100	90.072	ENSCAFG00000015546	POLR3A	100	90.072	Canis_familiaris
ENSXMAG00000015213	polr3a	100	90.072	ENSCAFG00020014711	POLR3A	100	90.072	Canis_lupus_dingo
ENSXMAG00000015213	polr3a	100	89.640	ENSCHIG00000000352	POLR3A	100	89.640	Capra_hircus
ENSXMAG00000015213	polr3a	100	89.424	ENSTSYG00000006671	POLR3A	100	89.424	Carlito_syrichta
ENSXMAG00000015213	polr3a	99	89.489	ENSCAPG00000016031	POLR3A	100	89.309	Cavia_aperea
ENSXMAG00000015213	polr3a	100	89.353	ENSCPOG00000022387	POLR3A	100	89.353	Cavia_porcellus
ENSXMAG00000015213	polr3a	100	88.201	ENSCCAG00000032995	POLR3A	100	88.201	Cebus_capucinus
ENSXMAG00000015213	polr3a	100	90.000	ENSCATG00000035842	POLR3A	100	90.000	Cercocebus_atys
ENSXMAG00000015213	polr3a	100	89.568	ENSCLAG00000009629	POLR3A	100	89.568	Chinchilla_lanigera
ENSXMAG00000015213	polr3a	100	90.000	ENSCSAG00000009292	POLR3A	100	90.000	Chlorocebus_sabaeus
ENSXMAG00000015213	polr3a	86	81.818	ENSCHOG00000008368	POLR3A	95	81.818	Choloepus_hoffmanni
ENSXMAG00000015213	polr3a	99	90.425	ENSCPBG00000002079	POLR3A	99	90.425	Chrysemys_picta_bellii
ENSXMAG00000015213	polr3a	99	68.804	ENSCSAVG00000009925	-	99	68.804	Ciona_savignyi
ENSXMAG00000015213	polr3a	86	85.643	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSXMAG00000015213	polr3a	82	89.825	ENSCGRG00001015599	-	92	89.989	Cricetulus_griseus_chok1gshd
ENSXMAG00000015213	polr3a	89	88.591	ENSCGRG00000001019	Polr3a	100	88.759	Cricetulus_griseus_crigri
ENSXMAG00000015213	polr3a	100	95.899	ENSCSEG00000016653	polr3a	100	95.899	Cynoglossus_semilaevis
ENSXMAG00000015213	polr3a	100	97.338	ENSCVAG00000023049	polr3a	100	97.338	Cyprinodon_variegatus
ENSXMAG00000015213	polr3a	99	92.192	ENSDARG00000102569	polr3a	99	91.859	Danio_rerio
ENSXMAG00000015213	polr3a	100	89.065	ENSDNOG00000010194	POLR3A	100	89.065	Dasypus_novemcinctus
ENSXMAG00000015213	polr3a	100	89.784	ENSDORG00000000184	Polr3a	100	89.784	Dipodomys_ordii
ENSXMAG00000015213	polr3a	99	57.019	FBgn0030687	CG17209	99	57.019	Drosophila_melanogaster
ENSXMAG00000015213	polr3a	88	88.259	ENSETEG00000007477	POLR3A	89	88.259	Echinops_telfairi
ENSXMAG00000015213	polr3a	63	75.527	ENSEBUG00000013761	polr3a	98	75.527	Eptatretus_burgeri
ENSXMAG00000015213	polr3a	100	89.856	ENSEASG00005023053	POLR3A	100	89.856	Equus_asinus_asinus
ENSXMAG00000015213	polr3a	99	89.917	ENSECAG00000019416	POLR3A	100	89.720	Equus_caballus
ENSXMAG00000015213	polr3a	98	85.445	ENSEEUG00000001774	POLR3A	100	85.608	Erinaceus_europaeus
ENSXMAG00000015213	polr3a	100	90.883	ENSELUG00000014016	polr3a	100	90.883	Esox_lucius
ENSXMAG00000015213	polr3a	100	90.216	ENSFCAG00000000843	POLR3A	100	90.216	Felis_catus
ENSXMAG00000015213	polr3a	100	90.079	ENSFALG00000006913	POLR3A	100	90.079	Ficedula_albicollis
ENSXMAG00000015213	polr3a	100	89.640	ENSFDAG00000007813	POLR3A	100	89.640	Fukomys_damarensis
ENSXMAG00000015213	polr3a	95	96.974	ENSFHEG00000011922	polr3a	99	96.974	Fundulus_heteroclitus
ENSXMAG00000015213	polr3a	100	87.650	ENSGMOG00000000291	polr3a	99	87.650	Gadus_morhua
ENSXMAG00000015213	polr3a	100	90.504	ENSGALG00000004947	POLR3A	100	90.504	Gallus_gallus
ENSXMAG00000015213	polr3a	100	99.353	ENSGAFG00000005112	polr3a	100	99.353	Gambusia_affinis
ENSXMAG00000015213	polr3a	100	93.885	ENSGACG00000002304	polr3a	100	93.885	Gasterosteus_aculeatus
ENSXMAG00000015213	polr3a	98	90.091	ENSGAGG00000010386	POLR3A	99	90.091	Gopherus_agassizii
ENSXMAG00000015213	polr3a	99	89.272	ENSGGOG00000027729	POLR3A	100	91.064	Gorilla_gorilla
ENSXMAG00000015213	polr3a	100	95.683	ENSHBUG00000018098	polr3a	100	95.683	Haplochromis_burtoni
ENSXMAG00000015213	polr3a	100	89.568	ENSHGLG00000017899	POLR3A	100	89.568	Heterocephalus_glaber_female
ENSXMAG00000015213	polr3a	100	89.568	ENSHGLG00100008483	POLR3A	100	89.568	Heterocephalus_glaber_male
ENSXMAG00000015213	polr3a	100	94.245	ENSHCOG00000001075	polr3a	100	94.245	Hippocampus_comes
ENSXMAG00000015213	polr3a	100	90.000	ENSSTOG00000012983	POLR3A	100	90.000	Ictidomys_tridecemlineatus
ENSXMAG00000015213	polr3a	100	95.755	ENSKMAG00000015290	polr3a	100	95.755	Kryptolebias_marmoratus
ENSXMAG00000015213	polr3a	99	93.737	ENSLBEG00000017214	polr3a	99	93.737	Labrus_bergylta
ENSXMAG00000015213	polr3a	98	88.045	ENSLACG00000018557	POLR3A	99	88.178	Latimeria_chalumnae
ENSXMAG00000015213	polr3a	100	91.816	ENSLOCG00000004942	polr3a	100	91.816	Lepisosteus_oculatus
ENSXMAG00000015213	polr3a	100	88.641	ENSLAFG00000016719	POLR3A	100	88.641	Loxodonta_africana
ENSXMAG00000015213	polr3a	100	89.928	ENSMFAG00000032218	POLR3A	100	89.928	Macaca_fascicularis
ENSXMAG00000015213	polr3a	100	89.928	ENSMMUG00000005514	POLR3A	100	89.928	Macaca_mulatta
ENSXMAG00000015213	polr3a	99	83.816	ENSMNEG00000035163	POLR3A	99	89.858	Macaca_nemestrina
ENSXMAG00000015213	polr3a	100	86.187	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSXMAG00000015213	polr3a	100	95.612	ENSMAMG00000017497	polr3a	100	95.612	Mastacembelus_armatus
ENSXMAG00000015213	polr3a	100	95.683	ENSMZEG00005000576	polr3a	100	95.683	Maylandia_zebra
ENSXMAG00000015213	polr3a	100	73.509	ENSMGAG00000005713	-	100	73.509	Meleagris_gallopavo
ENSXMAG00000015213	polr3a	100	87.410	ENSMAUG00000016247	Polr3a	100	87.410	Mesocricetus_auratus
ENSXMAG00000015213	polr3a	100	90.000	ENSMICG00000005937	POLR3A	100	91.051	Microcebus_murinus
ENSXMAG00000015213	polr3a	100	89.712	ENSMOCG00000012185	Polr3a	100	89.712	Microtus_ochrogaster
ENSXMAG00000015213	polr3a	100	94.532	ENSMMOG00000013822	polr3a	100	94.532	Mola_mola
ENSXMAG00000015213	polr3a	100	89.424	ENSMODG00000001036	POLR3A	100	89.424	Monodelphis_domestica
ENSXMAG00000015213	polr3a	100	95.108	ENSMALG00000001249	polr3a	100	95.108	Monopterus_albus
ENSXMAG00000015213	polr3a	100	89.496	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.496	Mus_caroli
ENSXMAG00000015213	polr3a	100	89.568	ENSMUSG00000025280	Polr3a	100	89.568	Mus_musculus
ENSXMAG00000015213	polr3a	100	89.496	MGP_PahariEiJ_G0030029	Polr3a	100	89.496	Mus_pahari
ENSXMAG00000015213	polr3a	100	86.906	MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	Mus_spretus
ENSXMAG00000015213	polr3a	100	89.444	ENSMPUG00000003790	POLR3A	100	89.444	Mustela_putorius_furo
ENSXMAG00000015213	polr3a	100	88.849	ENSMLUG00000011522	POLR3A	100	88.849	Myotis_lucifugus
ENSXMAG00000015213	polr3a	100	88.273	ENSNGAG00000015863	Polr3a	100	88.273	Nannospalax_galili
ENSXMAG00000015213	polr3a	100	93.453	ENSNBRG00000014262	polr3a	100	93.453	Neolamprologus_brichardi
ENSXMAG00000015213	polr3a	89	82.896	ENSNLEG00000010501	POLR3A	92	83.032	Nomascus_leucogenys
ENSXMAG00000015213	polr3a	99	76.945	ENSMEUG00000012446	POLR3A	100	76.945	Notamacropus_eugenii
ENSXMAG00000015213	polr3a	100	85.180	ENSOPRG00000001880	-	100	85.180	Ochotona_princeps
ENSXMAG00000015213	polr3a	100	89.209	ENSODEG00000015146	POLR3A	100	89.209	Octodon_degus
ENSXMAG00000015213	polr3a	100	95.971	ENSONIG00000016129	polr3a	100	95.971	Oreochromis_niloticus
ENSXMAG00000015213	polr3a	98	89.291	ENSOANG00000007013	POLR3A	100	89.116	Ornithorhynchus_anatinus
ENSXMAG00000015213	polr3a	100	89.496	ENSOCUG00000012450	POLR3A	100	89.496	Oryctolagus_cuniculus
ENSXMAG00000015213	polr3a	100	95.612	ENSORLG00000008958	polr3a	100	95.612	Oryzias_latipes
ENSXMAG00000015213	polr3a	98	95.629	ENSORLG00020007525	polr3a	98	95.678	Oryzias_latipes_hni
ENSXMAG00000015213	polr3a	100	95.612	ENSORLG00015006633	polr3a	100	95.612	Oryzias_latipes_hsok
ENSXMAG00000015213	polr3a	100	95.036	ENSOMEG00000012865	polr3a	100	95.036	Oryzias_melastigma
ENSXMAG00000015213	polr3a	100	89.784	ENSOGAG00000010995	POLR3A	100	89.784	Otolemur_garnettii
ENSXMAG00000015213	polr3a	100	89.583	ENSOARG00000009656	POLR3A	100	89.583	Ovis_aries
ENSXMAG00000015213	polr3a	100	90.216	ENSPPRG00000002128	POLR3A	100	90.216	Panthera_pardus
ENSXMAG00000015213	polr3a	100	90.216	ENSPTIG00000020916	POLR3A	100	90.216	Panthera_tigris_altaica
ENSXMAG00000015213	polr3a	100	90.072	ENSPTRG00000002664	POLR3A	100	90.072	Pan_troglodytes
ENSXMAG00000015213	polr3a	100	89.928	ENSPANG00000022508	POLR3A	100	89.928	Papio_anubis
ENSXMAG00000015213	polr3a	100	92.590	ENSPKIG00000008140	polr3a	100	93.497	Paramormyrops_kingsleyae
ENSXMAG00000015213	polr3a	98	90.139	ENSPSIG00000002092	POLR3A	100	90.139	Pelodiscus_sinensis
ENSXMAG00000015213	polr3a	100	89.281	ENSPEMG00000006768	Polr3a	100	89.281	Peromyscus_maniculatus_bairdii
ENSXMAG00000015213	polr3a	100	89.424	ENSPCIG00000015842	POLR3A	100	89.424	Phascolarctos_cinereus
ENSXMAG00000015213	polr3a	54	99.329	ENSPFOG00000006458	polr3a	100	99.329	Poecilia_formosa
ENSXMAG00000015213	polr3a	100	99.496	ENSPLAG00000000997	polr3a	100	99.496	Poecilia_latipinna
ENSXMAG00000015213	polr3a	100	99.424	ENSPMEG00000006821	polr3a	100	99.424	Poecilia_mexicana
ENSXMAG00000015213	polr3a	100	99.209	ENSPREG00000002385	polr3a	100	99.209	Poecilia_reticulata
ENSXMAG00000015213	polr3a	93	89.984	ENSPPYG00000002305	POLR3A	99	89.853	Pongo_abelii
ENSXMAG00000015213	polr3a	82	87.859	ENSPCAG00000005690	POLR3A	82	87.859	Procavia_capensis
ENSXMAG00000015213	polr3a	100	89.856	ENSPCOG00000028311	POLR3A	100	89.856	Propithecus_coquereli
ENSXMAG00000015213	polr3a	100	88.489	ENSPVAG00000015553	POLR3A	100	88.489	Pteropus_vampyrus
ENSXMAG00000015213	polr3a	100	95.755	ENSPNYG00000020987	polr3a	100	95.755	Pundamilia_nyererei
ENSXMAG00000015213	polr3a	99	87.968	ENSPNAG00000006629	polr3a	99	87.968	Pygocentrus_nattereri
ENSXMAG00000015213	polr3a	100	89.568	ENSRNOG00000010008	Polr3a	100	89.568	Rattus_norvegicus
ENSXMAG00000015213	polr3a	100	86.331	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSXMAG00000015213	polr3a	100	89.928	ENSRROG00000025527	POLR3A	100	89.928	Rhinopithecus_roxellana
ENSXMAG00000015213	polr3a	99	50.214	YOR116C	RPO31	98	50.314	Saccharomyces_cerevisiae
ENSXMAG00000015213	polr3a	100	89.928	ENSSBOG00000022199	POLR3A	100	89.928	Saimiri_boliviensis_boliviensis
ENSXMAG00000015213	polr3a	100	89.353	ENSSHAG00000007588	POLR3A	94	89.353	Sarcophilus_harrisii
ENSXMAG00000015213	polr3a	100	92.806	ENSSFOG00015014357	polr3a	100	92.806	Scleropages_formosus
ENSXMAG00000015213	polr3a	100	95.324	ENSSMAG00000001780	polr3a	100	95.324	Scophthalmus_maximus
ENSXMAG00000015213	polr3a	100	96.403	ENSSDUG00000019840	polr3a	100	96.403	Seriola_dumerili
ENSXMAG00000015213	polr3a	100	96.259	ENSSLDG00000023908	polr3a	100	96.259	Seriola_lalandi_dorsalis
ENSXMAG00000015213	polr3a	69	90.596	ENSSARG00000009916	POLR3A	89	90.596	Sorex_araneus
ENSXMAG00000015213	polr3a	100	88.201	ENSSPUG00000013209	POLR3A	100	88.201	Sphenodon_punctatus
ENSXMAG00000015213	polr3a	100	96.043	ENSSPAG00000017712	polr3a	100	96.043	Stegastes_partitus
ENSXMAG00000015213	polr3a	100	89.856	ENSSSCG00000010327	POLR3A	100	89.856	Sus_scrofa
ENSXMAG00000015213	polr3a	100	90.072	ENSTGUG00000006423	-	100	90.072	Taeniopygia_guttata
ENSXMAG00000015213	polr3a	100	94.820	ENSTRUG00000013488	polr3a	100	94.820	Takifugu_rubripes
ENSXMAG00000015213	polr3a	100	94.684	ENSTNIG00000013151	polr3a	100	94.684	Tetraodon_nigroviridis
ENSXMAG00000015213	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSXMAG00000015213	polr3a	100	83.597	ENSTTRG00000007817	POLR3A	100	83.597	Tursiops_truncatus
ENSXMAG00000015213	polr3a	100	87.770	ENSUAMG00000011283	POLR3A	100	87.770	Ursus_americanus
ENSXMAG00000015213	polr3a	100	90.072	ENSUMAG00000013913	POLR3A	100	90.072	Ursus_maritimus
ENSXMAG00000015213	polr3a	99	81.964	ENSVPAG00000003285	POLR3A	100	81.964	Vicugna_pacos
ENSXMAG00000015213	polr3a	100	90.072	ENSVVUG00000025523	POLR3A	100	90.072	Vulpes_vulpes
ENSXMAG00000015213	polr3a	91	90.533	ENSXETG00000018101	polr3a	100	90.560	Xenopus_tropicalis