EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015306 (Gene tree)
Gene ID: 102232674
Gene Symbol: arf5
Alias: zgc:101030|zgc:174360
Full Name: ADP-ribosylation factor 4
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 4542 bases
Position: chr17:5995924-6000465
Accession: 102232674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015337	MMR_HSR1	PF01926.23	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015359	-	543	XM_005815456	ENSXMAP00000015337	180 (aa)	XP_005815513	M4ALJ3
ENSXMAT00000033490	-	471	-	ENSXMAP00000031394	156 (aa)	-	-

Gene Model

Click here to download ENSXMAG00000015306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015306	arf5	100	91.667	ENSG00000004059	ARF5	100	91.667	Homo_sapiens
ENSXMAG00000015306	arf5	99	90.503	ENSAPOG00000000667	-	99	90.503	Acanthochromis_polyacanthus
ENSXMAG00000015306	arf5	100	91.667	ENSAMEG00000004635	ARF5	100	91.667	Ailuropoda_melanoleuca
ENSXMAG00000015306	arf5	100	98.889	ENSACIG00000005843	arf5	100	98.889	Amphilophus_citrinellus
ENSXMAG00000015306	arf5	100	70.556	ENSACIG00000014610	zgc:110286	100	70.556	Amphilophus_citrinellus
ENSXMAG00000015306	arf5	99	93.296	ENSACIG00000000467	-	99	93.296	Amphilophus_citrinellus
ENSXMAG00000015306	arf5	100	97.222	ENSAOCG00000023329	arf5	100	97.222	Amphiprion_ocellaris
ENSXMAG00000015306	arf5	99	89.385	ENSAOCG00000008113	-	99	89.385	Amphiprion_ocellaris
ENSXMAG00000015306	arf5	99	89.385	ENSAPEG00000003087	-	99	89.385	Amphiprion_percula
ENSXMAG00000015306	arf5	100	97.222	ENSAPEG00000024614	arf5	100	97.222	Amphiprion_percula
ENSXMAG00000015306	arf5	99	92.179	ENSATEG00000001302	-	99	92.179	Anabas_testudineus
ENSXMAG00000015306	arf5	100	98.889	ENSATEG00000003053	ARF5	100	98.889	Anabas_testudineus
ENSXMAG00000015306	arf5	100	91.667	ENSANAG00000026446	ARF5	100	91.667	Aotus_nancymaae
ENSXMAG00000015306	arf5	99	92.737	ENSACLG00000025604	-	99	92.737	Astatotilapia_calliptera
ENSXMAG00000015306	arf5	100	99.444	ENSACLG00000005705	arf5	100	99.444	Astatotilapia_calliptera
ENSXMAG00000015306	arf5	100	96.667	ENSAMXG00000031774	ARF5	100	96.667	Astyanax_mexicanus
ENSXMAG00000015306	arf5	100	96.111	ENSAMXG00000038224	-	100	96.111	Astyanax_mexicanus
ENSXMAG00000015306	arf5	100	91.111	ENSAMXG00000031467	arf4a	100	91.111	Astyanax_mexicanus
ENSXMAG00000015306	arf5	100	96.111	ENSAMXG00000004249	-	100	96.111	Astyanax_mexicanus
ENSXMAG00000015306	arf5	100	91.667	ENSBTAG00000009366	ARF5	100	91.667	Bos_taurus
ENSXMAG00000015306	arf5	99	87.709	WBGene00000183	arf-3	99	87.709	Caenorhabditis_elegans
ENSXMAG00000015306	arf5	100	91.667	ENSCJAG00000017604	ARF5	100	91.667	Callithrix_jacchus
ENSXMAG00000015306	arf5	100	77.103	ENSCAFG00020021629	ARF5	100	77.103	Canis_lupus_dingo
ENSXMAG00000015306	arf5	100	91.667	ENSCHIG00000018906	ARF5	100	91.667	Capra_hircus
ENSXMAG00000015306	arf5	100	89.503	ENSCPOG00000006239	ARF5	100	89.503	Cavia_porcellus
ENSXMAG00000015306	arf5	100	91.667	ENSCCAG00000027943	-	100	91.667	Cebus_capucinus
ENSXMAG00000015306	arf5	100	91.667	ENSCATG00000010217	ARF5	100	91.667	Cercocebus_atys
ENSXMAG00000015306	arf5	100	91.667	ENSCLAG00000007930	ARF5	100	91.667	Chinchilla_lanigera
ENSXMAG00000015306	arf5	100	91.667	ENSCSAG00000010208	ARF5	100	91.667	Chlorocebus_sabaeus
ENSXMAG00000015306	arf5	99	79.888	ENSCING00000004846	-	99	79.888	Ciona_intestinalis
ENSXMAG00000015306	arf5	99	76.243	ENSCSAVG00000001959	-	99	76.243	Ciona_savignyi
ENSXMAG00000015306	arf5	89	90.683	ENSCANG00000037234	ARF5	98	90.683	Colobus_angolensis_palliatus
ENSXMAG00000015306	arf5	100	91.667	ENSCGRG00001024919	Arf5	100	91.667	Cricetulus_griseus_chok1gshd
ENSXMAG00000015306	arf5	100	88.333	ENSCSEG00000006004	arf5	100	88.333	Cynoglossus_semilaevis
ENSXMAG00000015306	arf5	99	91.620	ENSCVAG00000011381	-	99	91.620	Cyprinodon_variegatus
ENSXMAG00000015306	arf5	100	100.000	ENSCVAG00000007314	-	100	100.000	Cyprinodon_variegatus
ENSXMAG00000015306	arf5	100	100.000	ENSCVAG00000009124	ARF5	100	100.000	Cyprinodon_variegatus
ENSXMAG00000015306	arf5	100	71.823	ENSDARG00000074210	ARF5	89	71.823	Danio_rerio
ENSXMAG00000015306	arf5	100	96.667	ENSDARG00000070472	arf5	100	96.667	Danio_rerio
ENSXMAG00000015306	arf5	100	97.222	ENSDARG00000113899	zgc:77650	100	97.222	Danio_rerio
ENSXMAG00000015306	arf5	100	91.111	ENSDARG00000045989	arf4a	100	91.111	Danio_rerio
ENSXMAG00000015306	arf5	100	91.667	ENSDORG00000000325	Arf5	100	91.667	Dipodomys_ordii
ENSXMAG00000015306	arf5	100	85.000	FBgn0013749	Arf102F	100	85.000	Drosophila_melanogaster
ENSXMAG00000015306	arf5	97	88.571	ENSETEG00000009275	ARF5	100	88.571	Echinops_telfairi
ENSXMAG00000015306	arf5	99	69.832	ENSEBUG00000004484	-	99	69.832	Eptatretus_burgeri
ENSXMAG00000015306	arf5	100	85.556	ENSEBUG00000014420	-	100	85.556	Eptatretus_burgeri
ENSXMAG00000015306	arf5	99	74.860	ENSELUG00000014428	arf4	99	74.860	Esox_lucius
ENSXMAG00000015306	arf5	100	91.667	ENSFCAG00000005482	ARF5	100	91.667	Felis_catus
ENSXMAG00000015306	arf5	100	99.444	ENSFHEG00000023119	arf5	100	99.444	Fundulus_heteroclitus
ENSXMAG00000015306	arf5	100	91.111	ENSGMOG00000008747	arf5	100	91.111	Gadus_morhua
ENSXMAG00000015306	arf5	100	91.667	ENSGMOG00000019109	-	99	91.667	Gadus_morhua
ENSXMAG00000015306	arf5	100	100.000	ENSGAFG00000018703	arf5	100	100.000	Gambusia_affinis
ENSXMAG00000015306	arf5	99	90.503	ENSGAFG00000005163	-	99	90.503	Gambusia_affinis
ENSXMAG00000015306	arf5	99	87.709	ENSGACG00000012500	-	99	87.709	Gasterosteus_aculeatus
ENSXMAG00000015306	arf5	100	97.778	ENSGACG00000000686	arf5	100	97.778	Gasterosteus_aculeatus
ENSXMAG00000015306	arf5	100	91.111	ENSGAGG00000000231	ARF5	100	91.111	Gopherus_agassizii
ENSXMAG00000015306	arf5	100	91.667	ENSGGOG00000016749	ARF5	100	91.667	Gorilla_gorilla
ENSXMAG00000015306	arf5	100	99.444	ENSHBUG00000008546	arf5	100	99.444	Haplochromis_burtoni
ENSXMAG00000015306	arf5	99	92.737	ENSHBUG00000011041	-	99	92.737	Haplochromis_burtoni
ENSXMAG00000015306	arf5	100	91.667	ENSHGLG00000007494	ARF5	100	91.667	Heterocephalus_glaber_female
ENSXMAG00000015306	arf5	100	90.556	ENSHGLG00100006040	ARF5	60	90.556	Heterocephalus_glaber_male
ENSXMAG00000015306	arf5	99	87.151	ENSHCOG00000015577	-	100	87.151	Hippocampus_comes
ENSXMAG00000015306	arf5	100	94.444	ENSIPUG00000004215	arf5	100	94.444	Ictalurus_punctatus
ENSXMAG00000015306	arf5	100	71.111	ENSIPUG00000006913	-	70	71.111	Ictalurus_punctatus
ENSXMAG00000015306	arf5	100	92.222	ENSIPUG00000007016	arf4	100	92.222	Ictalurus_punctatus
ENSXMAG00000015306	arf5	100	95.556	ENSIPUG00000004159	Arf5	100	95.556	Ictalurus_punctatus
ENSXMAG00000015306	arf5	100	91.667	ENSSTOG00000002104	ARF5	100	91.667	Ictidomys_tridecemlineatus
ENSXMAG00000015306	arf5	100	91.667	ENSJJAG00000005105	Arf5	100	91.667	Jaculus_jaculus
ENSXMAG00000015306	arf5	99	92.179	ENSKMAG00000012816	-	99	92.179	Kryptolebias_marmoratus
ENSXMAG00000015306	arf5	100	87.222	ENSLBEG00000012002	-	99	87.222	Labrus_bergylta
ENSXMAG00000015306	arf5	100	93.333	ENSLBEG00000026532	arf5	100	93.333	Labrus_bergylta
ENSXMAG00000015306	arf5	100	91.667	ENSLAFG00000011469	ARF5	100	91.667	Loxodonta_africana
ENSXMAG00000015306	arf5	100	91.667	ENSMFAG00000019772	ARF5	100	91.667	Macaca_fascicularis
ENSXMAG00000015306	arf5	100	91.667	ENSMMUG00000046381	ARF5	100	91.667	Macaca_mulatta
ENSXMAG00000015306	arf5	100	91.667	ENSMNEG00000040893	ARF5	100	91.667	Macaca_nemestrina
ENSXMAG00000015306	arf5	99	92.737	ENSMAMG00000008223	-	99	92.737	Mastacembelus_armatus
ENSXMAG00000015306	arf5	100	98.333	ENSMAMG00000021160	arf5	100	98.333	Mastacembelus_armatus
ENSXMAG00000015306	arf5	87	92.994	ENSMZEG00005019741	-	93	92.994	Maylandia_zebra
ENSXMAG00000015306	arf5	100	99.444	ENSMZEG00005015033	arf5	67	99.444	Maylandia_zebra
ENSXMAG00000015306	arf5	100	91.667	ENSMAUG00000014825	Arf5	100	91.667	Mesocricetus_auratus
ENSXMAG00000015306	arf5	100	91.667	ENSMICG00000000091	ARF5	100	91.667	Microcebus_murinus
ENSXMAG00000015306	arf5	100	91.667	ENSMOCG00000022861	Arf5	100	91.667	Microtus_ochrogaster
ENSXMAG00000015306	arf5	100	91.111	ENSMODG00000015229	ARF5	100	91.111	Monodelphis_domestica
ENSXMAG00000015306	arf5	100	98.889	ENSMALG00000010117	-	100	98.889	Monopterus_albus
ENSXMAG00000015306	arf5	99	69.832	ENSMALG00000022638	zgc:110286	100	69.832	Monopterus_albus
ENSXMAG00000015306	arf5	99	93.296	ENSMALG00000006020	-	99	93.296	Monopterus_albus
ENSXMAG00000015306	arf5	100	91.667	MGP_CAROLIEiJ_G0028156	Arf5	100	91.667	Mus_caroli
ENSXMAG00000015306	arf5	100	91.667	ENSMUSG00000020440	Arf5	100	91.667	Mus_musculus
ENSXMAG00000015306	arf5	100	91.667	MGP_PahariEiJ_G0021914	Arf5	100	91.667	Mus_pahari
ENSXMAG00000015306	arf5	100	91.667	MGP_SPRETEiJ_G0029156	Arf5	100	91.667	Mus_spretus
ENSXMAG00000015306	arf5	100	91.667	ENSMPUG00000006675	ARF5	100	91.667	Mustela_putorius_furo
ENSXMAG00000015306	arf5	100	91.667	ENSMLUG00000017122	ARF5	100	91.667	Myotis_lucifugus
ENSXMAG00000015306	arf5	100	91.667	ENSNGAG00000011743	Arf5	100	91.667	Nannospalax_galili
ENSXMAG00000015306	arf5	100	99.444	ENSNBRG00000018854	arf5	100	99.444	Neolamprologus_brichardi
ENSXMAG00000015306	arf5	100	91.667	ENSODEG00000011800	ARF5	100	91.667	Octodon_degus
ENSXMAG00000015306	arf5	100	99.444	ENSONIG00000007594	arf5	100	99.444	Oreochromis_niloticus
ENSXMAG00000015306	arf5	99	92.737	ENSONIG00000014890	-	99	92.737	Oreochromis_niloticus
ENSXMAG00000015306	arf5	100	91.667	ENSOCUG00000024365	ARF5	100	91.667	Oryctolagus_cuniculus
ENSXMAG00000015306	arf5	99	91.061	ENSORLG00020001755	-	99	91.061	Oryzias_latipes_hni
ENSXMAG00000015306	arf5	99	91.620	ENSOMEG00000000211	-	64	91.620	Oryzias_melastigma
ENSXMAG00000015306	arf5	100	99.444	ENSOMEG00000020821	ARF5	100	99.444	Oryzias_melastigma
ENSXMAG00000015306	arf5	100	91.667	ENSOGAG00000013336	ARF5	100	91.667	Otolemur_garnettii
ENSXMAG00000015306	arf5	100	91.667	ENSPPAG00000037755	ARF5	100	91.667	Pan_paniscus
ENSXMAG00000015306	arf5	100	91.667	ENSPPRG00000004674	ARF5	100	91.667	Panthera_pardus
ENSXMAG00000015306	arf5	100	91.667	ENSPTRG00000019651	ARF5	100	91.667	Pan_troglodytes
ENSXMAG00000015306	arf5	100	91.667	ENSPANG00000032970	ARF5	100	91.667	Papio_anubis
ENSXMAG00000015306	arf5	100	95.556	ENSPKIG00000013814	-	100	95.556	Paramormyrops_kingsleyae
ENSXMAG00000015306	arf5	100	95.000	ENSPKIG00000025381	-	100	95.000	Paramormyrops_kingsleyae
ENSXMAG00000015306	arf5	100	91.111	ENSPKIG00000025349	arf4a	100	91.111	Paramormyrops_kingsleyae
ENSXMAG00000015306	arf5	100	92.222	ENSPMGG00000009985	-	100	92.222	Periophthalmus_magnuspinnatus
ENSXMAG00000015306	arf5	100	91.667	ENSPEMG00000021476	Arf5	100	91.667	Peromyscus_maniculatus_bairdii
ENSXMAG00000015306	arf5	99	82.123	ENSPMAG00000009600	arf4a	100	82.123	Petromyzon_marinus
ENSXMAG00000015306	arf5	100	100.000	ENSPFOG00000015817	arf5	100	100.000	Poecilia_formosa
ENSXMAG00000015306	arf5	99	90.000	ENSPFOG00000017992	-	99	90.000	Poecilia_formosa
ENSXMAG00000015306	arf5	99	90.503	ENSPLAG00000015630	-	99	90.503	Poecilia_latipinna
ENSXMAG00000015306	arf5	100	100.000	ENSPLAG00000006742	arf5	100	100.000	Poecilia_latipinna
ENSXMAG00000015306	arf5	100	100.000	ENSPMEG00000009605	arf5	100	100.000	Poecilia_mexicana
ENSXMAG00000015306	arf5	99	90.503	ENSPMEG00000004624	-	99	90.503	Poecilia_mexicana
ENSXMAG00000015306	arf5	100	91.667	ENSPCOG00000027640	ARF5	100	91.667	Propithecus_coquereli
ENSXMAG00000015306	arf5	100	91.667	ENSPVAG00000013940	ARF5	100	91.667	Pteropus_vampyrus
ENSXMAG00000015306	arf5	99	92.737	ENSPNYG00000004931	-	99	92.737	Pundamilia_nyererei
ENSXMAG00000015306	arf5	100	99.444	ENSPNYG00000001663	arf5	100	99.444	Pundamilia_nyererei
ENSXMAG00000015306	arf5	100	75.000	ENSPNAG00000005054	-	100	75.000	Pygocentrus_nattereri
ENSXMAG00000015306	arf5	100	91.111	ENSPNAG00000004745	arf4a	100	91.111	Pygocentrus_nattereri
ENSXMAG00000015306	arf5	100	70.556	ENSPNAG00000004475	-	100	70.556	Pygocentrus_nattereri
ENSXMAG00000015306	arf5	100	96.111	ENSPNAG00000024427	-	100	96.111	Pygocentrus_nattereri
ENSXMAG00000015306	arf5	100	91.667	ENSRNOG00000007806	Arf5	100	91.667	Rattus_norvegicus
ENSXMAG00000015306	arf5	100	91.667	ENSRBIG00000039868	ARF5	100	91.667	Rhinopithecus_bieti
ENSXMAG00000015306	arf5	100	91.667	ENSRROG00000041157	ARF5	100	91.667	Rhinopithecus_roxellana
ENSXMAG00000015306	arf5	100	91.667	ENSSBOG00000021669	ARF5	100	91.667	Saimiri_boliviensis_boliviensis
ENSXMAG00000015306	arf5	100	91.667	ENSSHAG00000015053	ARF5	100	91.667	Sarcophilus_harrisii
ENSXMAG00000015306	arf5	100	83.889	ENSSFOG00015007701	-	100	83.889	Scleropages_formosus
ENSXMAG00000015306	arf5	100	96.111	ENSSFOG00015020707	ARF5	100	96.111	Scleropages_formosus
ENSXMAG00000015306	arf5	100	97.778	ENSSMAG00000011361	arf5	100	97.778	Scophthalmus_maximus
ENSXMAG00000015306	arf5	99	88.827	ENSSMAG00000004541	-	99	88.827	Scophthalmus_maximus
ENSXMAG00000015306	arf5	100	98.889	ENSSDUG00000005105	arf5	100	98.889	Seriola_dumerili
ENSXMAG00000015306	arf5	100	98.889	ENSSLDG00000017188	arf5	100	98.889	Seriola_lalandi_dorsalis
ENSXMAG00000015306	arf5	100	97.222	ENSSPAG00000014434	arf5	100	97.222	Stegastes_partitus
ENSXMAG00000015306	arf5	99	90.503	ENSSPAG00000022680	-	99	90.503	Stegastes_partitus
ENSXMAG00000015306	arf5	100	91.667	ENSSSCG00000016593	ARF5	100	91.667	Sus_scrofa
ENSXMAG00000015306	arf5	99	83.240	ENSTRUG00000025462	-	100	83.240	Takifugu_rubripes
ENSXMAG00000015306	arf5	99	84.916	ENSTNIG00000017954	-	100	84.916	Tetraodon_nigroviridis
ENSXMAG00000015306	arf5	99	97.207	ENSTNIG00000003348	arf5	100	97.207	Tetraodon_nigroviridis
ENSXMAG00000015306	arf5	90	91.975	ENSTTRG00000006043	ARF5	100	91.975	Tursiops_truncatus
ENSXMAG00000015306	arf5	100	91.667	ENSUAMG00000012982	ARF5	100	91.667	Ursus_americanus
ENSXMAG00000015306	arf5	100	91.667	ENSVVUG00000007062	ARF5	100	91.667	Vulpes_vulpes
ENSXMAG00000015306	arf5	99	90.503	ENSXCOG00000020384	-	99	90.503	Xiphophorus_couchianus
ENSXMAG00000015306	arf5	99	90.503	ENSXMAG00000004558	-	99	90.503	Xiphophorus_maculatus