EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015350 (Gene tree)
Gene ID: 102226967
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 12509 bases
Position: chr12:12401911-12414419
Accession: 102226967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015402	ResIII	PF04851.15	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015424	-	4650	XM_005795029	ENSXMAP00000015402	1090 (aa)	XP_005795086	M4ALQ8

Gene Model

Click here to download ENSXMAG00000015350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015350	smarcad1a	64	61.925	ENSG00000163104	SMARCAD1	99	66.667	Homo_sapiens
ENSXMAG00000015350	smarcad1a	100	72.182	ENSAPOG00000011446	smarcad1a	100	72.752	Acanthochromis_polyacanthus
ENSXMAG00000015350	smarcad1a	64	61.732	ENSAMEG00000005844	SMARCAD1	62	66.303	Ailuropoda_melanoleuca
ENSXMAG00000015350	smarcad1a	64	85.294	ENSACIG00000018326	smarcad1a	92	85.294	Amphilophus_citrinellus
ENSXMAG00000015350	smarcad1a	100	71.133	ENSAOCG00000019762	smarcad1a	100	72.257	Amphiprion_ocellaris
ENSXMAG00000015350	smarcad1a	100	72.232	ENSAPEG00000003889	smarcad1a	100	72.142	Amphiprion_percula
ENSXMAG00000015350	smarcad1a	95	70.190	ENSATEG00000015608	smarcad1a	99	71.170	Anabas_testudineus
ENSXMAG00000015350	smarcad1a	72	66.822	ENSAPLG00000004630	SMARCAD1	85	63.150	Anas_platyrhynchos
ENSXMAG00000015350	smarcad1a	58	65.312	ENSACAG00000013554	SMARCAD1	100	46.964	Anolis_carolinensis
ENSXMAG00000015350	smarcad1a	81	61.678	ENSANAG00000020488	SMARCAD1	89	66.147	Aotus_nancymaae
ENSXMAG00000015350	smarcad1a	100	69.835	ENSACLG00000017063	smarcad1a	100	70.701	Astatotilapia_calliptera
ENSXMAG00000015350	smarcad1a	64	68.429	ENSAMXG00000015470	smarcad1a	98	68.429	Astyanax_mexicanus
ENSXMAG00000015350	smarcad1a	71	67.310	ENSAMXG00000019130	smarcad1b	90	70.000	Astyanax_mexicanus
ENSXMAG00000015350	smarcad1a	89	61.925	ENSBTAG00000017061	SMARCAD1	62	66.407	Bos_taurus
ENSXMAG00000015350	smarcad1a	56	41.586	WBGene00010845	M03C11.8	67	40.179	Caenorhabditis_elegans
ENSXMAG00000015350	smarcad1a	64	61.818	ENSCJAG00000006778	SMARCAD1	63	66.303	Callithrix_jacchus
ENSXMAG00000015350	smarcad1a	89	61.732	ENSCAFG00000010026	SMARCAD1	94	66.303	Canis_familiaris
ENSXMAG00000015350	smarcad1a	81	61.732	ENSCAFG00020003994	SMARCAD1	91	66.303	Canis_lupus_dingo
ENSXMAG00000015350	smarcad1a	89	61.818	ENSCHIG00000012905	SMARCAD1	62	66.303	Capra_hircus
ENSXMAG00000015350	smarcad1a	65	60.935	ENSTSYG00000002706	SMARCAD1	62	66.147	Carlito_syrichta
ENSXMAG00000015350	smarcad1a	71	54.690	ENSCAPG00000016744	SMARCAD1	84	56.437	Cavia_aperea
ENSXMAG00000015350	smarcad1a	87	61.367	ENSCPOG00000011398	SMARCAD1	100	62.663	Cavia_porcellus
ENSXMAG00000015350	smarcad1a	64	61.958	ENSCCAG00000022264	SMARCAD1	99	66.835	Cebus_capucinus
ENSXMAG00000015350	smarcad1a	82	61.073	ENSCATG00000035663	SMARCAD1	91	66.303	Cercocebus_atys
ENSXMAG00000015350	smarcad1a	78	61.073	ENSCSAG00000004186	SMARCAD1	99	62.861	Chlorocebus_sabaeus
ENSXMAG00000015350	smarcad1a	60	49.394	ENSCING00000001688	-	99	49.394	Ciona_intestinalis
ENSXMAG00000015350	smarcad1a	64	61.678	ENSCANG00000003556	SMARCAD1	99	66.667	Colobus_angolensis_palliatus
ENSXMAG00000015350	smarcad1a	100	65.893	ENSCSEG00000017903	smarcad1a	100	65.956	Cynoglossus_semilaevis
ENSXMAG00000015350	smarcad1a	100	65.653	ENSCSEG00000014419	-	100	65.770	Cynoglossus_semilaevis
ENSXMAG00000015350	smarcad1a	88	68.793	ENSDARG00000014041	smarcad1a	100	70.742	Danio_rerio
ENSXMAG00000015350	smarcad1a	60	72.657	ENSDARG00000073721	smarcad1b	71	71.006	Danio_rerio
ENSXMAG00000015350	smarcad1a	64	61.818	ENSDNOG00000000806	-	62	66.303	Dasypus_novemcinctus
ENSXMAG00000015350	smarcad1a	58	44.410	FBgn0032157	Etl1	77	43.946	Drosophila_melanogaster
ENSXMAG00000015350	smarcad1a	56	47.994	ENSEBUG00000003969	smarcad1a	96	47.520	Eptatretus_burgeri
ENSXMAG00000015350	smarcad1a	89	61.818	ENSEASG00005012382	SMARCAD1	94	66.303	Equus_asinus_asinus
ENSXMAG00000015350	smarcad1a	89	61.818	ENSECAG00000011562	SMARCAD1	94	66.303	Equus_caballus
ENSXMAG00000015350	smarcad1a	100	63.002	ENSELUG00000018535	smarcad1a	95	77.396	Esox_lucius
ENSXMAG00000015350	smarcad1a	72	67.751	ENSELUG00000019154	smarcad1b	80	69.675	Esox_lucius
ENSXMAG00000015350	smarcad1a	89	62.011	ENSFCAG00000003958	SMARCAD1	99	66.835	Felis_catus
ENSXMAG00000015350	smarcad1a	84	67.134	ENSFALG00000006089	SMARCAD1	99	65.000	Ficedula_albicollis
ENSXMAG00000015350	smarcad1a	86	61.625	ENSFDAG00000017027	SMARCAD1	96	62.808	Fukomys_damarensis
ENSXMAG00000015350	smarcad1a	100	80.109	ENSFHEG00000012778	smarcad1a	100	80.383	Fundulus_heteroclitus
ENSXMAG00000015350	smarcad1a	79	78.865	ENSGMOG00000018995	smarcad1a	97	79.315	Gadus_morhua
ENSXMAG00000015350	smarcad1a	82	60.027	ENSGALG00000037339	SMARCAD1	95	61.878	Gallus_gallus
ENSXMAG00000015350	smarcad1a	100	91.101	ENSGAFG00000013498	smarcad1a	100	91.101	Gambusia_affinis
ENSXMAG00000015350	smarcad1a	80	80.641	ENSGACG00000007327	smarcad1a	98	81.650	Gasterosteus_aculeatus
ENSXMAG00000015350	smarcad1a	63	62.132	ENSGAGG00000008582	SMARCAD1	69	62.132	Gopherus_agassizii
ENSXMAG00000015350	smarcad1a	64	61.818	ENSGGOG00000023001	SMARCAD1	62	66.303	Gorilla_gorilla
ENSXMAG00000015350	smarcad1a	100	69.378	ENSHBUG00000011042	smarcad1a	100	70.246	Haplochromis_burtoni
ENSXMAG00000015350	smarcad1a	86	61.625	ENSHGLG00000005070	SMARCAD1	96	62.808	Heterocephalus_glaber_female
ENSXMAG00000015350	smarcad1a	86	61.625	ENSHGLG00100006812	SMARCAD1	96	62.808	Heterocephalus_glaber_male
ENSXMAG00000015350	smarcad1a	100	59.723	ENSHCOG00000007848	smarcad1a	100	60.190	Hippocampus_comes
ENSXMAG00000015350	smarcad1a	66	72.841	ENSIPUG00000022817	smarcad1b	83	69.041	Ictalurus_punctatus
ENSXMAG00000015350	smarcad1a	87	61.699	ENSSTOG00000001227	SMARCAD1	62	65.991	Ictidomys_tridecemlineatus
ENSXMAG00000015350	smarcad1a	99	73.352	ENSKMAG00000021351	smarcad1a	99	73.278	Kryptolebias_marmoratus
ENSXMAG00000015350	smarcad1a	64	81.402	ENSLBEG00000008088	smarcad1a	99	67.452	Labrus_bergylta
ENSXMAG00000015350	smarcad1a	81	75.307	ENSLOCG00000012909	smarcad1a	97	73.568	Lepisosteus_oculatus
ENSXMAG00000015350	smarcad1a	64	60.979	ENSLAFG00000000040	SMARCAD1	62	65.211	Loxodonta_africana
ENSXMAG00000015350	smarcad1a	82	61.073	ENSMFAG00000042606	SMARCAD1	91	66.303	Macaca_fascicularis
ENSXMAG00000015350	smarcad1a	82	61.073	ENSMMUG00000022242	SMARCAD1	91	66.303	Macaca_mulatta
ENSXMAG00000015350	smarcad1a	64	61.818	ENSMNEG00000038117	SMARCAD1	99	66.667	Macaca_nemestrina
ENSXMAG00000015350	smarcad1a	64	61.818	ENSMLEG00000038333	SMARCAD1	99	66.667	Mandrillus_leucophaeus
ENSXMAG00000015350	smarcad1a	100	66.033	ENSMAMG00000000933	smarcad1a	100	71.506	Mastacembelus_armatus
ENSXMAG00000015350	smarcad1a	100	68.676	ENSMZEG00005005203	smarcad1a	100	69.561	Maylandia_zebra
ENSXMAG00000015350	smarcad1a	84	63.994	ENSMGAG00000005577	SMARCAD1	83	63.994	Meleagris_gallopavo
ENSXMAG00000015350	smarcad1a	91	61.592	ENSMICG00000009746	SMARCAD1	62	66.096	Microcebus_murinus
ENSXMAG00000015350	smarcad1a	58	66.147	ENSMOCG00000017142	Smarcad1	63	66.147	Microtus_ochrogaster
ENSXMAG00000015350	smarcad1a	70	81.579	ENSMMOG00000000275	smarcad1a	99	79.741	Mola_mola
ENSXMAG00000015350	smarcad1a	89	60.690	ENSMODG00000019268	SMARCAD1	78	66.303	Monodelphis_domestica
ENSXMAG00000015350	smarcad1a	71	65.835	MGP_CAROLIEiJ_G0028458	-	62	65.835	Mus_caroli
ENSXMAG00000015350	smarcad1a	58	65.835	ENSMUSG00000029920	Smarcad1	63	65.835	Mus_musculus
ENSXMAG00000015350	smarcad1a	58	65.835	MGP_PahariEiJ_G0022198	Smarcad1	63	65.835	Mus_pahari
ENSXMAG00000015350	smarcad1a	58	65.835	MGP_SPRETEiJ_G0029462	Smarcad1	63	65.835	Mus_spretus
ENSXMAG00000015350	smarcad1a	64	61.732	ENSMPUG00000002111	SMARCAD1	62	66.303	Mustela_putorius_furo
ENSXMAG00000015350	smarcad1a	64	61.872	ENSMLUG00000000425	SMARCAD1	67	62.915	Myotis_lucifugus
ENSXMAG00000015350	smarcad1a	58	65.679	ENSNGAG00000000810	Smarcad1	63	65.679	Nannospalax_galili
ENSXMAG00000015350	smarcad1a	63	82.362	ENSNBRG00000012749	smarcad1a	96	75.990	Neolamprologus_brichardi
ENSXMAG00000015350	smarcad1a	64	61.818	ENSNLEG00000014225	SMARCAD1	99	66.667	Nomascus_leucogenys
ENSXMAG00000015350	smarcad1a	86	61.345	ENSODEG00000004334	SMARCAD1	91	66.147	Octodon_degus
ENSXMAG00000015350	smarcad1a	81	84.243	ENSONIG00000015059	smarcad1a	100	80.146	Oreochromis_niloticus
ENSXMAG00000015350	smarcad1a	64	66.874	ENSOANG00000013764	SMARCAD1	89	66.874	Ornithorhynchus_anatinus
ENSXMAG00000015350	smarcad1a	89	61.538	ENSOCUG00000017283	SMARCAD1	99	63.120	Oryctolagus_cuniculus
ENSXMAG00000015350	smarcad1a	100	67.210	ENSORLG00015009045	smarcad1a	100	67.029	Oryzias_latipes_hsok
ENSXMAG00000015350	smarcad1a	99	66.849	ENSOMEG00000023032	smarcad1a	100	66.576	Oryzias_melastigma
ENSXMAG00000015350	smarcad1a	64	61.173	ENSOGAG00000011444	SMARCAD1	63	65.630	Otolemur_garnettii
ENSXMAG00000015350	smarcad1a	64	61.818	ENSPPAG00000035715	SMARCAD1	62	66.303	Pan_paniscus
ENSXMAG00000015350	smarcad1a	89	62.011	ENSPPRG00000024756	SMARCAD1	99	66.835	Panthera_pardus
ENSXMAG00000015350	smarcad1a	89	62.117	ENSPTIG00000017868	SMARCAD1	62	66.563	Panthera_tigris_altaica
ENSXMAG00000015350	smarcad1a	64	61.818	ENSPTRG00000023126	SMARCAD1	99	66.667	Pan_troglodytes
ENSXMAG00000015350	smarcad1a	64	60.446	ENSPANG00000019757	SMARCAD1	63	64.752	Papio_anubis
ENSXMAG00000015350	smarcad1a	67	61.321	ENSPSIG00000010255	SMARCAD1	68	63.805	Pelodiscus_sinensis
ENSXMAG00000015350	smarcad1a	59	78.003	ENSPMGG00000010735	smarcad1a	96	76.106	Periophthalmus_magnuspinnatus
ENSXMAG00000015350	smarcad1a	90	53.288	ENSPEMG00000001854	Smarcad1	98	55.539	Peromyscus_maniculatus_bairdii
ENSXMAG00000015350	smarcad1a	87	54.508	ENSPMAG00000003516	smarcad1a	95	56.894	Petromyzon_marinus
ENSXMAG00000015350	smarcad1a	73	61.103	ENSPCIG00000008137	SMARCAD1	96	61.898	Phascolarctos_cinereus
ENSXMAG00000015350	smarcad1a	100	94.236	ENSPFOG00000019116	smarcad1a	100	94.145	Poecilia_formosa
ENSXMAG00000015350	smarcad1a	100	94.328	ENSPLAG00000000108	smarcad1a	100	94.694	Poecilia_latipinna
ENSXMAG00000015350	smarcad1a	100	94.328	ENSPMEG00000009155	smarcad1a	100	94.328	Poecilia_mexicana
ENSXMAG00000015350	smarcad1a	100	94.500	ENSPREG00000018185	smarcad1a	100	94.500	Poecilia_reticulata
ENSXMAG00000015350	smarcad1a	64	61.646	ENSPPYG00000014935	SMARCAD1	63	66.096	Pongo_abelii
ENSXMAG00000015350	smarcad1a	66	52.055	ENSPCOG00000020478	SMARCAD1	71	56.162	Propithecus_coquereli
ENSXMAG00000015350	smarcad1a	86	61.625	ENSPVAG00000001760	SMARCAD1	91	65.938	Pteropus_vampyrus
ENSXMAG00000015350	smarcad1a	63	81.503	ENSPNYG00000010087	smarcad1a	96	75.652	Pundamilia_nyererei
ENSXMAG00000015350	smarcad1a	100	56.830	ENSPNAG00000001663	smarcad1a	100	71.283	Pygocentrus_nattereri
ENSXMAG00000015350	smarcad1a	79	69.811	ENSPNAG00000010099	smarcad1b	91	70.290	Pygocentrus_nattereri
ENSXMAG00000015350	smarcad1a	58	66.147	ENSRNOG00000006391	Smarcad1	63	66.147	Rattus_norvegicus
ENSXMAG00000015350	smarcad1a	64	61.818	ENSRBIG00000041989	SMARCAD1	62	66.303	Rhinopithecus_bieti
ENSXMAG00000015350	smarcad1a	64	61.818	ENSRROG00000035309	SMARCAD1	62	66.303	Rhinopithecus_roxellana
ENSXMAG00000015350	smarcad1a	89	61.958	ENSSBOG00000032114	SMARCAD1	99	66.835	Saimiri_boliviensis_boliviensis
ENSXMAG00000015350	smarcad1a	81	60.966	ENSSHAG00000001279	SMARCAD1	82	61.756	Sarcophilus_harrisii
ENSXMAG00000015350	smarcad1a	87	73.945	ENSSFOG00015016814	smarcad1b	95	73.945	Scleropages_formosus
ENSXMAG00000015350	smarcad1a	62	71.221	ENSSFOG00015020909	smarcad1a	91	71.221	Scleropages_formosus
ENSXMAG00000015350	smarcad1a	100	70.837	ENSSMAG00000001326	smarcad1a	100	71.017	Scophthalmus_maximus
ENSXMAG00000015350	smarcad1a	74	76.695	ENSSDUG00000022338	smarcad1a	99	75.692	Seriola_dumerili
ENSXMAG00000015350	smarcad1a	100	71.286	ENSSLDG00000024986	smarcad1a	100	71.739	Seriola_lalandi_dorsalis
ENSXMAG00000015350	smarcad1a	54	66.891	ENSSPUG00000004633	SMARCAD1	99	66.891	Sphenodon_punctatus
ENSXMAG00000015350	smarcad1a	100	72.364	ENSSPAG00000001970	smarcad1a	100	73.321	Stegastes_partitus
ENSXMAG00000015350	smarcad1a	77	61.818	ENSSSCG00000009193	SMARCAD1	93	66.303	Sus_scrofa
ENSXMAG00000015350	smarcad1a	63	66.978	ENSTGUG00000003127	SMARCAD1	100	63.188	Taeniopygia_guttata
ENSXMAG00000015350	smarcad1a	80	80.309	ENSTNIG00000017585	smarcad1a	97	81.259	Tetraodon_nigroviridis
ENSXMAG00000015350	smarcad1a	71	69.643	ENSTBEG00000002789	SMARCAD1	82	69.643	Tupaia_belangeri
ENSXMAG00000015350	smarcad1a	87	61.732	ENSTTRG00000000226	SMARCAD1	81	66.199	Tursiops_truncatus
ENSXMAG00000015350	smarcad1a	64	61.732	ENSUAMG00000022262	SMARCAD1	67	66.345	Ursus_americanus
ENSXMAG00000015350	smarcad1a	64	61.732	ENSUMAG00000004549	SMARCAD1	62	66.303	Ursus_maritimus
ENSXMAG00000015350	smarcad1a	89	61.592	ENSVVUG00000007271	SMARCAD1	100	61.603	Vulpes_vulpes
ENSXMAG00000015350	smarcad1a	78	58.272	ENSXETG00000019214	smarcad1	100	57.887	Xenopus_tropicalis
ENSXMAG00000015350	smarcad1a	76	100.000	ENSXCOG00000005232	smarcad1a	88	100.000	Xiphophorus_couchianus