EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015353 (Gene tree)
Gene ID: 102225425
Gene Symbol: -
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 9821 bases
Position: chr13:2877649-2887469
Accession: 102225425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015377	zf-C2H2	PF00096.26	1.8e-25	1	4
ENSXMAP00000015377	zf-C2H2	PF00096.26	1.8e-25	2	4
ENSXMAP00000015377	zf-C2H2	PF00096.26	1.8e-25	3	4
ENSXMAP00000015377	zf-C2H2	PF00096.26	1.8e-25	4	4
ENSXMAP00000015377	zf-met	PF12874.7	8.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015399	-	1749	XM_005796534	ENSXMAP00000015377	297 (aa)	XP_005796591	M4ALN3

Gene Model

Click here to download ENSXMAG00000015353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015353	-	100	87.625	ENSAPOG00000015197	-	100	87.625	Acanthochromis_polyacanthus
ENSXMAG00000015353	-	99	76.431	ENSAPOG00000009279	scrt1b	99	76.431	Acanthochromis_polyacanthus
ENSXMAG00000015353	-	100	62.081	ENSAPOG00000003680	scrt2	99	62.081	Acanthochromis_polyacanthus
ENSXMAG00000015353	-	99	75.758	ENSACIG00000013613	scrt1b	99	75.758	Amphilophus_citrinellus
ENSXMAG00000015353	-	100	61.953	ENSACIG00000012604	scrt2	99	61.953	Amphilophus_citrinellus
ENSXMAG00000015353	-	97	54.369	ENSACIG00000001296	-	96	53.698	Amphilophus_citrinellus
ENSXMAG00000015353	-	100	93.645	ENSACIG00000006586	-	100	93.645	Amphilophus_citrinellus
ENSXMAG00000015353	-	100	62.081	ENSAOCG00000021557	scrt2	99	62.081	Amphiprion_ocellaris
ENSXMAG00000015353	-	100	94.314	ENSAOCG00000023304	-	100	94.314	Amphiprion_ocellaris
ENSXMAG00000015353	-	99	76.431	ENSAOCG00000003910	scrt1b	99	76.431	Amphiprion_ocellaris
ENSXMAG00000015353	-	99	76.094	ENSAPEG00000000869	scrt1b	99	76.094	Amphiprion_percula
ENSXMAG00000015353	-	100	62.081	ENSAPEG00000022558	scrt2	99	62.081	Amphiprion_percula
ENSXMAG00000015353	-	100	94.314	ENSAPEG00000005677	-	100	94.314	Amphiprion_percula
ENSXMAG00000015353	-	97	53.517	ENSATEG00000003195	-	97	53.517	Anabas_testudineus
ENSXMAG00000015353	-	100	59.878	ENSATEG00000023998	scrt2	99	59.574	Anabas_testudineus
ENSXMAG00000015353	-	100	84.950	ENSATEG00000011660	-	100	84.950	Anabas_testudineus
ENSXMAG00000015353	-	99	75.000	ENSATEG00000002302	scrt1b	99	76.094	Anabas_testudineus
ENSXMAG00000015353	-	69	78.922	ENSACAG00000016109	SCRT2	91	78.922	Anolis_carolinensis
ENSXMAG00000015353	-	99	76.094	ENSACLG00000007162	scrt1b	99	76.094	Astatotilapia_calliptera
ENSXMAG00000015353	-	100	90.429	ENSACLG00000012046	-	100	90.429	Astatotilapia_calliptera
ENSXMAG00000015353	-	99	78.716	ENSAMXG00000038085	scrt1a	99	78.716	Astyanax_mexicanus
ENSXMAG00000015353	-	84	68.400	ENSAMXG00000034158	scrt2	87	68.400	Astyanax_mexicanus
ENSXMAG00000015353	-	99	72.819	ENSAMXG00000042624	SCRT1	100	72.819	Astyanax_mexicanus
ENSXMAG00000015353	-	55	59.509	WBGene00000468	ces-1	79	47.368	Caenorhabditis_elegans
ENSXMAG00000015353	-	87	58.052	ENSCPBG00000027613	SCRT2	100	58.052	Chrysemys_picta_bellii
ENSXMAG00000015353	-	99	76.094	ENSCPBG00000018899	SCRT1	99	76.094	Chrysemys_picta_bellii
ENSXMAG00000015353	-	89	88.991	ENSCGRG00000001380	Scrt2	100	88.991	Cricetulus_griseus_crigri
ENSXMAG00000015353	-	99	75.000	ENSCSEG00000008596	scrt1b	99	75.758	Cynoglossus_semilaevis
ENSXMAG00000015353	-	100	60.681	ENSCSEG00000021542	scrt2	99	60.681	Cynoglossus_semilaevis
ENSXMAG00000015353	-	100	91.973	ENSCSEG00000014892	-	100	91.973	Cynoglossus_semilaevis
ENSXMAG00000015353	-	100	94.983	ENSCVAG00000003190	-	100	94.983	Cyprinodon_variegatus
ENSXMAG00000015353	-	99	75.421	ENSCVAG00000009561	scrt1b	99	75.421	Cyprinodon_variegatus
ENSXMAG00000015353	-	100	58.232	ENSCVAG00000021038	scrt2	99	58.232	Cyprinodon_variegatus
ENSXMAG00000015353	-	99	77.778	ENSDARG00000100821	scrt1a	99	77.778	Danio_rerio
ENSXMAG00000015353	-	99	75.421	ENSDARG00000040214	scrt1b	99	75.421	Danio_rerio
ENSXMAG00000015353	-	96	61.364	ENSELUG00000023883	scrt2	95	60.714	Esox_lucius
ENSXMAG00000015353	-	99	78.305	ENSELUG00000005435	scrt1b	98	78.305	Esox_lucius
ENSXMAG00000015353	-	100	76.923	ENSELUG00000022228	scrt1a	100	76.923	Esox_lucius
ENSXMAG00000015353	-	67	78.500	ENSFALG00000005718	SCRT2	83	79.000	Ficedula_albicollis
ENSXMAG00000015353	-	97	57.785	ENSFDAG00000008733	SCRT1	97	57.785	Fukomys_damarensis
ENSXMAG00000015353	-	99	75.758	ENSFHEG00000014820	scrt1b	99	75.758	Fundulus_heteroclitus
ENSXMAG00000015353	-	100	63.545	ENSFHEG00000005732	scrt2	99	63.545	Fundulus_heteroclitus
ENSXMAG00000015353	-	100	95.652	ENSFHEG00000009794	-	100	95.652	Fundulus_heteroclitus
ENSXMAG00000015353	-	99	76.351	ENSGMOG00000000629	scrt1b	99	76.351	Gadus_morhua
ENSXMAG00000015353	-	56	97.619	ENSGMOG00000013833	-	56	97.619	Gadus_morhua
ENSXMAG00000015353	-	97	56.289	ENSGMOG00000019519	scrt2	96	56.289	Gadus_morhua
ENSXMAG00000015353	-	97	61.379	ENSGALG00000028912	SCRT2	97	63.103	Gallus_gallus
ENSXMAG00000015353	-	99	75.758	ENSGAFG00000007636	scrt1b	99	75.758	Gambusia_affinis
ENSXMAG00000015353	-	100	89.899	ENSGAFG00000009650	-	100	89.899	Gambusia_affinis
ENSXMAG00000015353	-	100	60.443	ENSGAFG00000003093	scrt2	99	60.443	Gambusia_affinis
ENSXMAG00000015353	-	99	74.237	ENSGACG00000008982	scrt1b	99	74.237	Gasterosteus_aculeatus
ENSXMAG00000015353	-	100	88.629	ENSGACG00000004072	-	100	88.629	Gasterosteus_aculeatus
ENSXMAG00000015353	-	99	76.610	ENSGAGG00000011736	SCRT1	99	76.610	Gopherus_agassizii
ENSXMAG00000015353	-	96	62.153	ENSGAGG00000020761	SCRT2	96	62.500	Gopherus_agassizii
ENSXMAG00000015353	-	60	81.356	ENSGAGG00000020760	-	68	81.921	Gopherus_agassizii
ENSXMAG00000015353	-	99	76.094	ENSHBUG00000016621	scrt1b	99	76.094	Haplochromis_burtoni
ENSXMAG00000015353	-	100	93.311	ENSHBUG00000019101	-	100	93.311	Haplochromis_burtoni
ENSXMAG00000015353	-	97	62.976	ENSHBUG00000012492	scrt2	96	62.976	Haplochromis_burtoni
ENSXMAG00000015353	-	99	75.758	ENSHCOG00000016704	scrt1b	99	75.758	Hippocampus_comes
ENSXMAG00000015353	-	97	60.390	ENSHCOG00000008116	scrt2	97	60.390	Hippocampus_comes
ENSXMAG00000015353	-	100	73.443	ENSHCOG00000016179	-	100	73.443	Hippocampus_comes
ENSXMAG00000015353	-	99	70.748	ENSIPUG00000005547	-	100	70.748	Ictalurus_punctatus
ENSXMAG00000015353	-	98	78.571	ENSIPUG00000004551	scrt1a	99	78.571	Ictalurus_punctatus
ENSXMAG00000015353	-	100	59.146	ENSKMAG00000018087	scrt2	99	59.146	Kryptolebias_marmoratus
ENSXMAG00000015353	-	100	94.314	ENSKMAG00000009489	-	100	94.314	Kryptolebias_marmoratus
ENSXMAG00000015353	-	99	75.758	ENSKMAG00000005484	scrt1b	99	75.758	Kryptolebias_marmoratus
ENSXMAG00000015353	-	100	92.929	ENSLBEG00000023388	-	100	92.929	Labrus_bergylta
ENSXMAG00000015353	-	100	59.394	ENSLBEG00000015419	scrt2	99	59.091	Labrus_bergylta
ENSXMAG00000015353	-	99	73.986	ENSLACG00000003588	SCRT1	99	73.986	Latimeria_chalumnae
ENSXMAG00000015353	-	99	76.768	ENSLOCG00000007573	scrt1b	99	76.768	Lepisosteus_oculatus
ENSXMAG00000015353	-	97	52.632	ENSLOCG00000002246	scrt2	97	53.750	Lepisosteus_oculatus
ENSXMAG00000015353	-	96	91.852	ENSMFAG00000035496	SCRT1	71	85.621	Macaca_fascicularis
ENSXMAG00000015353	-	100	59.574	ENSMAMG00000001291	scrt2	99	59.574	Mastacembelus_armatus
ENSXMAG00000015353	-	99	75.000	ENSMAMG00000011698	scrt1b	99	76.094	Mastacembelus_armatus
ENSXMAG00000015353	-	99	76.094	ENSMZEG00005005627	scrt1b	99	76.094	Maylandia_zebra
ENSXMAG00000015353	-	100	93.311	ENSMZEG00005026702	-	100	93.311	Maylandia_zebra
ENSXMAG00000015353	-	97	62.976	ENSMZEG00005026445	scrt2	96	62.976	Maylandia_zebra
ENSXMAG00000015353	-	65	80.829	ENSMGAG00000016579	SCRT2	80	80.829	Meleagris_gallopavo
ENSXMAG00000015353	-	100	92.000	ENSMMOG00000018345	-	100	92.000	Mola_mola
ENSXMAG00000015353	-	99	74.411	ENSMMOG00000003327	scrt1b	99	74.411	Mola_mola
ENSXMAG00000015353	-	100	59.202	ENSMMOG00000009272	scrt2	99	59.509	Mola_mola
ENSXMAG00000015353	-	97	61.724	ENSMALG00000013656	scrt2	96	61.724	Monopterus_albus
ENSXMAG00000015353	-	99	75.676	ENSMALG00000012704	scrt1b	99	76.768	Monopterus_albus
ENSXMAG00000015353	-	61	68.649	ENSNGAG00000020815	Scrt2	91	67.895	Nannospalax_galili
ENSXMAG00000015353	-	99	73.179	ENSNBRG00000013983	scrt1b	99	73.179	Neolamprologus_brichardi
ENSXMAG00000015353	-	100	61.745	ENSNBRG00000007221	scrt2	99	61.745	Neolamprologus_brichardi
ENSXMAG00000015353	-	100	93.311	ENSNBRG00000014882	-	100	93.311	Neolamprologus_brichardi
ENSXMAG00000015353	-	100	60.061	ENSONIG00000016758	scrt2	99	60.061	Oreochromis_niloticus
ENSXMAG00000015353	-	97	57.639	ENSONIG00000003152	-	96	57.639	Oreochromis_niloticus
ENSXMAG00000015353	-	99	75.758	ENSONIG00000006007	scrt1b	99	75.758	Oreochromis_niloticus
ENSXMAG00000015353	-	97	89.180	ENSONIG00000019809	-	100	89.180	Oreochromis_niloticus
ENSXMAG00000015353	-	99	74.662	ENSORLG00000025651	scrt1b	99	75.421	Oryzias_latipes
ENSXMAG00000015353	-	100	89.701	ENSORLG00000022825	-	100	89.701	Oryzias_latipes
ENSXMAG00000015353	-	100	58.841	ENSORLG00000024051	scrt2	99	58.841	Oryzias_latipes
ENSXMAG00000015353	-	99	74.662	ENSORLG00020012967	scrt1b	99	75.421	Oryzias_latipes_hni
ENSXMAG00000015353	-	100	58.841	ENSORLG00020011478	scrt2	99	58.841	Oryzias_latipes_hni
ENSXMAG00000015353	-	100	58.841	ENSORLG00015005524	scrt2	99	58.841	Oryzias_latipes_hsok
ENSXMAG00000015353	-	99	74.662	ENSORLG00015019165	scrt1b	99	75.421	Oryzias_latipes_hsok
ENSXMAG00000015353	-	100	89.369	ENSORLG00015010104	-	100	89.369	Oryzias_latipes_hsok
ENSXMAG00000015353	-	99	74.662	ENSOMEG00000003925	scrt1b	99	75.421	Oryzias_melastigma
ENSXMAG00000015353	-	100	91.582	ENSOMEG00000000286	-	100	91.582	Oryzias_melastigma
ENSXMAG00000015353	-	100	59.451	ENSOMEG00000002661	scrt2	99	59.451	Oryzias_melastigma
ENSXMAG00000015353	-	99	77.441	ENSPKIG00000020085	scrt1a	99	77.441	Paramormyrops_kingsleyae
ENSXMAG00000015353	-	99	76.768	ENSPKIG00000022303	SCRT1	99	76.768	Paramormyrops_kingsleyae
ENSXMAG00000015353	-	100	87.625	ENSPMGG00000021402	-	100	87.625	Periophthalmus_magnuspinnatus
ENSXMAG00000015353	-	100	63.423	ENSPMGG00000016561	scrt2	99	63.423	Periophthalmus_magnuspinnatus
ENSXMAG00000015353	-	99	73.064	ENSPMGG00000002260	scrt1b	99	73.064	Periophthalmus_magnuspinnatus
ENSXMAG00000015353	-	100	58.537	ENSPFOG00000007738	scrt2	99	58.537	Poecilia_formosa
ENSXMAG00000015353	-	100	99.327	ENSPFOG00000005616	-	100	99.327	Poecilia_formosa
ENSXMAG00000015353	-	99	75.758	ENSPFOG00000017719	scrt1b	99	75.758	Poecilia_formosa
ENSXMAG00000015353	-	100	63.087	ENSPLAG00000005765	scrt2	99	63.087	Poecilia_latipinna
ENSXMAG00000015353	-	99	75.758	ENSPLAG00000009876	scrt1b	99	75.758	Poecilia_latipinna
ENSXMAG00000015353	-	100	99.327	ENSPLAG00000011718	-	100	99.327	Poecilia_latipinna
ENSXMAG00000015353	-	100	63.087	ENSPMEG00000001538	scrt2	99	63.087	Poecilia_mexicana
ENSXMAG00000015353	-	100	99.327	ENSPMEG00000011706	-	100	99.327	Poecilia_mexicana
ENSXMAG00000015353	-	99	75.758	ENSPMEG00000013274	scrt1b	99	75.758	Poecilia_mexicana
ENSXMAG00000015353	-	100	58.537	ENSPREG00000001147	scrt2	99	58.537	Poecilia_reticulata
ENSXMAG00000015353	-	99	75.758	ENSPREG00000018985	scrt1b	99	75.758	Poecilia_reticulata
ENSXMAG00000015353	-	100	98.653	ENSPREG00000012166	-	100	98.653	Poecilia_reticulata
ENSXMAG00000015353	-	97	62.976	ENSPNYG00000013109	scrt2	96	62.976	Pundamilia_nyererei
ENSXMAG00000015353	-	100	92.977	ENSPNYG00000008865	-	100	92.977	Pundamilia_nyererei
ENSXMAG00000015353	-	99	76.094	ENSPNYG00000017733	scrt1b	99	76.094	Pundamilia_nyererei
ENSXMAG00000015353	-	99	73.737	ENSPNAG00000027880	-	100	74.074	Pygocentrus_nattereri
ENSXMAG00000015353	-	99	78.041	ENSPNAG00000017415	scrt1a	99	78.041	Pygocentrus_nattereri
ENSXMAG00000015353	-	99	76.431	ENSSFOG00015001195	SCRT1	99	76.431	Scleropages_formosus
ENSXMAG00000015353	-	100	90.728	ENSSMAG00000005122	-	100	90.728	Scophthalmus_maximus
ENSXMAG00000015353	-	100	77.258	ENSSMAG00000019207	scrt1b	100	77.258	Scophthalmus_maximus
ENSXMAG00000015353	-	99	76.431	ENSSDUG00000007752	scrt1b	99	76.431	Seriola_dumerili
ENSXMAG00000015353	-	100	60.952	ENSSDUG00000001637	scrt2	96	61.812	Seriola_dumerili
ENSXMAG00000015353	-	100	95.318	ENSSDUG00000013215	-	100	95.318	Seriola_dumerili
ENSXMAG00000015353	-	99	76.431	ENSSLDG00000017166	scrt1b	99	76.431	Seriola_lalandi_dorsalis
ENSXMAG00000015353	-	100	95.318	ENSSLDG00000016454	-	100	95.318	Seriola_lalandi_dorsalis
ENSXMAG00000015353	-	100	59.574	ENSSLDG00000013565	scrt2	99	58.967	Seriola_lalandi_dorsalis
ENSXMAG00000015353	-	97	62.500	ENSSPUG00000018637	SCRT2	97	62.500	Sphenodon_punctatus
ENSXMAG00000015353	-	100	93.980	ENSSPAG00000006788	-	100	93.980	Stegastes_partitus
ENSXMAG00000015353	-	99	76.431	ENSSPAG00000002200	scrt1b	99	76.431	Stegastes_partitus
ENSXMAG00000015353	-	100	62.416	ENSSPAG00000014018	scrt2	99	62.416	Stegastes_partitus
ENSXMAG00000015353	-	67	78.392	ENSTGUG00000006801	SCRT2	86	78.894	Taeniopygia_guttata
ENSXMAG00000015353	-	99	75.338	ENSTRUG00000011637	scrt1b	100	75.338	Takifugu_rubripes
ENSXMAG00000015353	-	100	90.635	ENSTRUG00000012719	-	100	91.304	Takifugu_rubripes
ENSXMAG00000015353	-	97	61.386	ENSTRUG00000007620	scrt2	97	61.386	Takifugu_rubripes
ENSXMAG00000015353	-	87	83.333	ENSTRUG00000019558	-	82	84.109	Takifugu_rubripes
ENSXMAG00000015353	-	100	62.667	ENSTNIG00000012473	scrt2	100	62.667	Tetraodon_nigroviridis
ENSXMAG00000015353	-	99	75.421	ENSTNIG00000018384	scrt1b	99	75.421	Tetraodon_nigroviridis
ENSXMAG00000015353	-	99	76.094	ENSXCOG00000019675	scrt1b	99	76.094	Xiphophorus_couchianus
ENSXMAG00000015353	-	100	59.748	ENSXCOG00000014367	scrt2	99	59.810	Xiphophorus_couchianus
ENSXMAG00000015353	-	100	89.899	ENSXCOG00000019861	-	100	89.899	Xiphophorus_couchianus
ENSXMAG00000015353	-	100	57.927	ENSXMAG00000028567	scrt2	99	57.927	Xiphophorus_maculatus
ENSXMAG00000015353	-	99	76.094	ENSXMAG00000027885	scrt1b	99	76.094	Xiphophorus_maculatus