EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015478 (Gene tree)
Gene ID: 102232312
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 2693 bases
Position: chr20:17326445-17329137
Accession: 102232312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000015509	TruB_N	PF01509.18	2.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015532	-	1183	XM_005810448	ENSXMAP00000015509	336 (aa)	XP_005810505	M4AM15

Gene Model

Click here to download ENSXMAG00000015478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015478	trub2	83	55.755	ENSG00000167112	TRUB2	84	55.755	Homo_sapiens
ENSXMAG00000015478	trub2	73	74.590	ENSAPOG00000015733	trub2	88	74.590	Acanthochromis_polyacanthus
ENSXMAG00000015478	trub2	51	67.416	ENSAPOG00000018216	-	85	67.416	Acanthochromis_polyacanthus
ENSXMAG00000015478	trub2	76	71.765	ENSAPOG00000018284	-	94	71.765	Acanthochromis_polyacanthus
ENSXMAG00000015478	trub2	84	56.690	ENSAMEG00000015395	TRUB2	85	56.690	Ailuropoda_melanoleuca
ENSXMAG00000015478	trub2	97	72.393	ENSACIG00000016500	trub2	99	72.393	Amphilophus_citrinellus
ENSXMAG00000015478	trub2	97	73.700	ENSAOCG00000002330	trub2	96	73.700	Amphiprion_ocellaris
ENSXMAG00000015478	trub2	97	73.700	ENSAPEG00000013177	trub2	96	73.700	Amphiprion_percula
ENSXMAG00000015478	trub2	89	72.910	ENSATEG00000011371	trub2	92	74.227	Anabas_testudineus
ENSXMAG00000015478	trub2	83	50.890	ENSAPLG00000009254	TRUB2	89	51.636	Anas_platyrhynchos
ENSXMAG00000015478	trub2	84	53.004	ENSACAG00000007331	TRUB2	86	53.004	Anolis_carolinensis
ENSXMAG00000015478	trub2	83	56.115	ENSANAG00000036234	TRUB2	90	55.714	Aotus_nancymaae
ENSXMAG00000015478	trub2	97	71.077	ENSACLG00000010793	trub2	98	71.077	Astatotilapia_calliptera
ENSXMAG00000015478	trub2	89	60.596	ENSAMXG00000031679	trub2	83	61.856	Astyanax_mexicanus
ENSXMAG00000015478	trub2	83	55.396	ENSCJAG00000020009	TRUB2	84	55.396	Callithrix_jacchus
ENSXMAG00000015478	trub2	86	53.559	ENSCAFG00000020068	TRUB2	84	55.396	Canis_familiaris
ENSXMAG00000015478	trub2	51	54.070	ENSCAFG00020017325	-	96	54.070	Canis_lupus_dingo
ENSXMAG00000015478	trub2	83	54.839	ENSCHIG00000021160	TRUB2	84	54.839	Capra_hircus
ENSXMAG00000015478	trub2	83	56.738	ENSTSYG00000034163	TRUB2	84	56.738	Carlito_syrichta
ENSXMAG00000015478	trub2	74	53.629	ENSCAPG00000000223	TRUB2	89	49.286	Cavia_aperea
ENSXMAG00000015478	trub2	86	54.514	ENSCPOG00000013535	TRUB2	91	51.667	Cavia_porcellus
ENSXMAG00000015478	trub2	86	54.514	ENSCCAG00000026531	-	87	54.514	Cebus_capucinus
ENSXMAG00000015478	trub2	84	51.957	ENSCCAG00000028463	-	85	51.957	Cebus_capucinus
ENSXMAG00000015478	trub2	83	56.115	ENSCATG00000038234	TRUB2	84	56.115	Cercocebus_atys
ENSXMAG00000015478	trub2	83	55.036	ENSCLAG00000001702	TRUB2	87	53.529	Chinchilla_lanigera
ENSXMAG00000015478	trub2	83	53.191	ENSCSAG00000014117	TRUB2	84	53.191	Chlorocebus_sabaeus
ENSXMAG00000015478	trub2	83	54.317	ENSCHOG00000001555	TRUB2	84	54.317	Choloepus_hoffmanni
ENSXMAG00000015478	trub2	96	50.602	ENSCPBG00000025186	TRUB2	82	55.160	Chrysemys_picta_bellii
ENSXMAG00000015478	trub2	85	32.877	ENSCSAVG00000003930	-	89	32.877	Ciona_savignyi
ENSXMAG00000015478	trub2	83	49.640	ENSCANG00000016135	TRUB2	82	49.640	Colobus_angolensis_palliatus
ENSXMAG00000015478	trub2	83	52.518	ENSCGRG00001024441	Trub2	91	49.412	Cricetulus_griseus_chok1gshd
ENSXMAG00000015478	trub2	83	52.518	ENSCGRG00000005633	Trub2	84	52.518	Cricetulus_griseus_crigri
ENSXMAG00000015478	trub2	93	63.694	ENSCSEG00000001331	trub2	94	63.694	Cynoglossus_semilaevis
ENSXMAG00000015478	trub2	99	76.807	ENSCVAG00000009901	trub2	99	76.807	Cyprinodon_variegatus
ENSXMAG00000015478	trub2	89	61.000	ENSDARG00000028379	trub2	83	62.199	Danio_rerio
ENSXMAG00000015478	trub2	79	36.879	ENSDNOG00000043967	-	81	38.148	Dasypus_novemcinctus
ENSXMAG00000015478	trub2	82	55.197	ENSDNOG00000045679	-	83	55.197	Dasypus_novemcinctus
ENSXMAG00000015478	trub2	83	55.036	ENSDORG00000016222	Trub2	87	55.036	Dipodomys_ordii
ENSXMAG00000015478	trub2	85	32.534	FBgn0033060	CG7849	91	32.534	Drosophila_melanogaster
ENSXMAG00000015478	trub2	83	54.317	ENSETEG00000009114	TRUB2	86	54.317	Echinops_telfairi
ENSXMAG00000015478	trub2	68	48.438	ENSEBUG00000015723	trub2	80	48.438	Eptatretus_burgeri
ENSXMAG00000015478	trub2	83	56.028	ENSEASG00005016819	TRUB2	84	56.028	Equus_asinus_asinus
ENSXMAG00000015478	trub2	83	56.115	ENSECAG00000023520	TRUB2	84	56.115	Equus_caballus
ENSXMAG00000015478	trub2	83	53.957	ENSEEUG00000008908	TRUB2	84	53.957	Erinaceus_europaeus
ENSXMAG00000015478	trub2	90	63.608	ENSELUG00000002376	trub2	95	64.918	Esox_lucius
ENSXMAG00000015478	trub2	83	57.143	ENSFCAG00000005839	TRUB2	86	57.143	Felis_catus
ENSXMAG00000015478	trub2	74	54.800	ENSFALG00000001364	TRUB2	80	55.600	Ficedula_albicollis
ENSXMAG00000015478	trub2	83	55.396	ENSFDAG00000021374	TRUB2	95	49.730	Fukomys_damarensis
ENSXMAG00000015478	trub2	100	72.917	ENSFHEG00000014655	trub2	100	72.917	Fundulus_heteroclitus
ENSXMAG00000015478	trub2	88	59.933	ENSGMOG00000000981	trub2	95	60.839	Gadus_morhua
ENSXMAG00000015478	trub2	82	54.380	ENSGALG00000004920	TRUB2	67	54.380	Gallus_gallus
ENSXMAG00000015478	trub2	100	93.750	ENSGAFG00000010107	trub2	100	94.048	Gambusia_affinis
ENSXMAG00000015478	trub2	98	68.693	ENSGACG00000001476	trub2	87	74.138	Gasterosteus_aculeatus
ENSXMAG00000015478	trub2	84	54.965	ENSGAGG00000022872	TRUB2	82	55.235	Gopherus_agassizii
ENSXMAG00000015478	trub2	83	55.396	ENSGGOG00000014780	TRUB2	84	55.396	Gorilla_gorilla
ENSXMAG00000015478	trub2	97	71.692	ENSHBUG00000022384	trub2	98	71.692	Haplochromis_burtoni
ENSXMAG00000015478	trub2	83	54.317	ENSHGLG00000016715	TRUB2	84	54.317	Heterocephalus_glaber_female
ENSXMAG00000015478	trub2	83	54.317	ENSHGLG00100016548	TRUB2	84	54.317	Heterocephalus_glaber_male
ENSXMAG00000015478	trub2	93	70.064	ENSHCOG00000017748	trub2	96	70.064	Hippocampus_comes
ENSXMAG00000015478	trub2	93	58.730	ENSIPUG00000017725	hdhd3	51	62.199	Ictalurus_punctatus
ENSXMAG00000015478	trub2	83	54.676	ENSSTOG00000022617	-	84	54.676	Ictidomys_tridecemlineatus
ENSXMAG00000015478	trub2	83	54.676	ENSSTOG00000008024	-	87	51.765	Ictidomys_tridecemlineatus
ENSXMAG00000015478	trub2	90	46.405	ENSJJAG00000019181	Trub2	91	46.405	Jaculus_jaculus
ENSXMAG00000015478	trub2	97	71.560	ENSKMAG00000007861	trub2	98	71.560	Kryptolebias_marmoratus
ENSXMAG00000015478	trub2	99	66.866	ENSLBEG00000000907	trub2	99	66.866	Labrus_bergylta
ENSXMAG00000015478	trub2	99	48.512	ENSLACG00000001515	TRUB2	99	47.917	Latimeria_chalumnae
ENSXMAG00000015478	trub2	86	59.862	ENSLOCG00000000885	trub2	95	59.862	Lepisosteus_oculatus
ENSXMAG00000015478	trub2	83	54.317	ENSLAFG00000002174	TRUB2	91	54.317	Loxodonta_africana
ENSXMAG00000015478	trub2	83	55.755	ENSMFAG00000000881	TRUB2	84	55.755	Macaca_fascicularis
ENSXMAG00000015478	trub2	83	55.755	ENSMMUG00000014146	TRUB2	84	55.755	Macaca_mulatta
ENSXMAG00000015478	trub2	83	55.755	ENSMNEG00000011189	TRUB2	84	55.755	Macaca_nemestrina
ENSXMAG00000015478	trub2	83	55.755	ENSMLEG00000037270	TRUB2	84	55.755	Mandrillus_leucophaeus
ENSXMAG00000015478	trub2	88	72.635	ENSMAMG00000023643	trub2	96	73.448	Mastacembelus_armatus
ENSXMAG00000015478	trub2	97	71.385	ENSMZEG00005016018	trub2	98	71.385	Maylandia_zebra
ENSXMAG00000015478	trub2	54	57.377	ENSMGAG00000003894	TRUB2	92	57.377	Meleagris_gallopavo
ENSXMAG00000015478	trub2	83	52.878	ENSMAUG00000010403	Trub2	95	47.027	Mesocricetus_auratus
ENSXMAG00000015478	trub2	83	55.755	ENSMICG00000047032	TRUB2	84	55.755	Microcebus_murinus
ENSXMAG00000015478	trub2	83	52.878	ENSMOCG00000014291	Trub2	91	52.878	Microtus_ochrogaster
ENSXMAG00000015478	trub2	93	69.108	ENSMMOG00000021674	trub2	97	69.108	Mola_mola
ENSXMAG00000015478	trub2	84	53.710	ENSMODG00000005940	TRUB2	95	53.710	Monodelphis_domestica
ENSXMAG00000015478	trub2	97	72.727	ENSMALG00000021231	trub2	98	72.727	Monopterus_albus
ENSXMAG00000015478	trub2	83	52.878	MGP_CAROLIEiJ_G0023368	Trub2	96	47.059	Mus_caroli
ENSXMAG00000015478	trub2	83	52.518	ENSMUSG00000039826	Trub2	95	47.027	Mus_musculus
ENSXMAG00000015478	trub2	83	53.237	MGP_PahariEiJ_G0024826	Trub2	87	51.176	Mus_pahari
ENSXMAG00000015478	trub2	83	52.878	MGP_SPRETEiJ_G0024286	Trub2	95	47.568	Mus_spretus
ENSXMAG00000015478	trub2	84	55.282	ENSMPUG00000013206	TRUB2	77	55.282	Mustela_putorius_furo
ENSXMAG00000015478	trub2	83	55.396	ENSMLUG00000005256	TRUB2	83	55.396	Myotis_lucifugus
ENSXMAG00000015478	trub2	83	51.439	ENSNGAG00000018679	Trub2	84	51.439	Nannospalax_galili
ENSXMAG00000015478	trub2	97	70.552	ENSNBRG00000016294	trub2	99	70.552	Neolamprologus_brichardi
ENSXMAG00000015478	trub2	83	55.755	ENSNLEG00000017556	TRUB2	84	55.755	Nomascus_leucogenys
ENSXMAG00000015478	trub2	83	53.957	ENSMEUG00000000484	TRUB2	89	53.957	Notamacropus_eugenii
ENSXMAG00000015478	trub2	87	48.658	ENSOPRG00000001981	TRUB2	84	50.903	Ochotona_princeps
ENSXMAG00000015478	trub2	88	53.041	ENSODEG00000017292	TRUB2	87	52.941	Octodon_degus
ENSXMAG00000015478	trub2	97	71.779	ENSONIG00000004230	trub2	99	71.779	Oreochromis_niloticus
ENSXMAG00000015478	trub2	56	51.042	ENSOANG00000029023	-	83	51.042	Ornithorhynchus_anatinus
ENSXMAG00000015478	trub2	83	55.036	ENSOCUG00000026296	TRUB2	76	55.036	Oryctolagus_cuniculus
ENSXMAG00000015478	trub2	96	70.679	ENSORLG00000020011	trub2	95	70.679	Oryzias_latipes
ENSXMAG00000015478	trub2	94	70.978	ENSORLG00020011028	trub2	90	70.978	Oryzias_latipes_hni
ENSXMAG00000015478	trub2	94	71.609	ENSORLG00015007494	trub2	94	71.924	Oryzias_latipes_hsok
ENSXMAG00000015478	trub2	97	70.552	ENSOMEG00000006702	trub2	99	70.552	Oryzias_melastigma
ENSXMAG00000015478	trub2	60	56.500	ENSOARG00000003785	-	81	56.098	Ovis_aries
ENSXMAG00000015478	trub2	83	55.036	ENSOARG00000010579	-	84	55.036	Ovis_aries
ENSXMAG00000015478	trub2	83	56.115	ENSPPAG00000043146	TRUB2	84	56.115	Pan_paniscus
ENSXMAG00000015478	trub2	83	57.143	ENSPPRG00000006307	TRUB2	86	57.143	Panthera_pardus
ENSXMAG00000015478	trub2	83	57.500	ENSPTIG00000012366	TRUB2	86	57.500	Panthera_tigris_altaica
ENSXMAG00000015478	trub2	83	55.755	ENSPTRG00000021423	TRUB2	84	55.755	Pan_troglodytes
ENSXMAG00000015478	trub2	83	55.755	ENSPTRG00000052151	-	84	55.755	Pan_troglodytes
ENSXMAG00000015478	trub2	83	55.755	ENSPANG00000025856	TRUB2	84	55.755	Papio_anubis
ENSXMAG00000015478	trub2	91	62.866	ENSPKIG00000019769	trub2	94	65.854	Paramormyrops_kingsleyae
ENSXMAG00000015478	trub2	84	51.064	ENSPSIG00000015701	TRUB2	93	51.071	Pelodiscus_sinensis
ENSXMAG00000015478	trub2	92	64.839	ENSPMGG00000010206	trub2	90	68.056	Periophthalmus_magnuspinnatus
ENSXMAG00000015478	trub2	83	53.047	ENSPEMG00000017893	Trub2	91	49.708	Peromyscus_maniculatus_bairdii
ENSXMAG00000015478	trub2	83	55.036	ENSPCIG00000026731	TRUB2	89	55.036	Phascolarctos_cinereus
ENSXMAG00000015478	trub2	97	92.705	ENSPFOG00000018018	trub2	87	92.705	Poecilia_formosa
ENSXMAG00000015478	trub2	97	92.705	ENSPLAG00000010484	trub2	94	92.705	Poecilia_latipinna
ENSXMAG00000015478	trub2	100	94.379	ENSPMEG00000012913	trub2	100	93.491	Poecilia_mexicana
ENSXMAG00000015478	trub2	100	93.491	ENSPREG00000002549	trub2	100	92.604	Poecilia_reticulata
ENSXMAG00000015478	trub2	83	55.396	ENSPPYG00000019650	TRUB2	86	55.000	Pongo_abelii
ENSXMAG00000015478	trub2	83	56.115	ENSPCAG00000015068	TRUB2	85	56.115	Procavia_capensis
ENSXMAG00000015478	trub2	83	55.036	ENSPCOG00000017100	TRUB2	84	55.036	Propithecus_coquereli
ENSXMAG00000015478	trub2	77	54.615	ENSPVAG00000001224	TRUB2	87	54.615	Pteropus_vampyrus
ENSXMAG00000015478	trub2	97	71.692	ENSPNYG00000013666	trub2	98	71.692	Pundamilia_nyererei
ENSXMAG00000015478	trub2	99	56.325	ENSPNAG00000017292	trub2	83	61.512	Pygocentrus_nattereri
ENSXMAG00000015478	trub2	83	52.688	ENSRNOG00000043189	Trub2	86	52.688	Rattus_norvegicus
ENSXMAG00000015478	trub2	83	50.360	ENSRBIG00000006965	TRUB2	82	50.360	Rhinopithecus_bieti
ENSXMAG00000015478	trub2	83	56.115	ENSRROG00000042928	TRUB2	84	56.115	Rhinopithecus_roxellana
ENSXMAG00000015478	trub2	83	55.396	ENSSBOG00000022439	TRUB2	84	55.396	Saimiri_boliviensis_boliviensis
ENSXMAG00000015478	trub2	86	63.194	ENSSFOG00015013391	trub2	92	63.194	Scleropages_formosus
ENSXMAG00000015478	trub2	99	68.675	ENSSMAG00000020820	trub2	98	68.373	Scophthalmus_maximus
ENSXMAG00000015478	trub2	97	72.308	ENSSDUG00000016928	trub2	97	72.308	Seriola_dumerili
ENSXMAG00000015478	trub2	97	70.859	ENSSLDG00000024701	trub2	97	70.859	Seriola_lalandi_dorsalis
ENSXMAG00000015478	trub2	94	49.051	ENSSPUG00000015515	TRUB2	94	49.051	Sphenodon_punctatus
ENSXMAG00000015478	trub2	99	70.746	ENSSPAG00000017865	trub2	100	69.760	Stegastes_partitus
ENSXMAG00000015478	trub2	83	54.676	ENSSSCG00000005645	TRUB2	84	53.414	Sus_scrofa
ENSXMAG00000015478	trub2	75	54.941	ENSTGUG00000003704	TRUB2	94	55.645	Taeniopygia_guttata
ENSXMAG00000015478	trub2	90	71.192	ENSTRUG00000015499	trub2	89	72.414	Takifugu_rubripes
ENSXMAG00000015478	trub2	87	69.863	ENSTNIG00000014721	trub2	99	70.345	Tetraodon_nigroviridis
ENSXMAG00000015478	trub2	53	53.371	ENSTBEG00000000586	TRUB2	79	53.371	Tupaia_belangeri
ENSXMAG00000015478	trub2	83	53.237	ENSTTRG00000016486	TRUB2	84	53.237	Tursiops_truncatus
ENSXMAG00000015478	trub2	84	55.986	ENSUAMG00000020276	TRUB2	83	55.986	Ursus_americanus
ENSXMAG00000015478	trub2	84	56.338	ENSUMAG00000022051	TRUB2	83	56.338	Ursus_maritimus
ENSXMAG00000015478	trub2	83	43.165	ENSVPAG00000005793	TRUB2	87	43.165	Vicugna_pacos
ENSXMAG00000015478	trub2	86	53.559	ENSVVUG00000013451	TRUB2	84	53.559	Vulpes_vulpes
ENSXMAG00000015478	trub2	85	53.819	ENSXETG00000003973	trub2	87	54.196	Xenopus_tropicalis
ENSXMAG00000015478	trub2	100	98.810	ENSXCOG00000008759	trub2	100	98.810	Xiphophorus_couchianus