EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015531 (Gene tree)
Gene ID: 102233356
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Minus strand
Length: 7266 bases
Position: chr20:17365100-17372365
Accession: 102233356
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000024450	zf-C2H2	PF00096.26	2.2e-30	1	4
ENSXMAP00000024450	zf-C2H2	PF00096.26	2.2e-30	2	4
ENSXMAP00000024450	zf-C2H2	PF00096.26	2.2e-30	3	4
ENSXMAP00000024450	zf-C2H2	PF00096.26	2.2e-30	4	4
ENSXMAP00000015561	zf-C2H2	PF00096.26	4.9e-23	1	3
ENSXMAP00000015561	zf-C2H2	PF00096.26	4.9e-23	2	3
ENSXMAP00000015561	zf-C2H2	PF00096.26	4.9e-23	3	3
ENSXMAP00000024450	zf-met	PF12874.7	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015584	-	1950	XM_023324910	ENSXMAP00000015561	649 (aa)	XP_023180678	M4AM67
ENSXMAT00000027369	-	2076	XM_005810451	ENSXMAP00000024450	691 (aa)	XP_005810508	-

Gene Model

Click here to download ENSXMAG00000015531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015531	patz1	100	58.003	ENSG00000100105	PATZ1	100	57.856	Homo_sapiens
ENSXMAG00000015531	patz1	100	89.697	ENSAPOG00000018447	patz1	100	89.697	Acanthochromis_polyacanthus
ENSXMAG00000015531	patz1	100	54.558	ENSAMEG00000007074	PATZ1	100	54.357	Ailuropoda_melanoleuca
ENSXMAG00000015531	patz1	100	81.818	ENSACIG00000016779	patz1	100	85.366	Amphilophus_citrinellus
ENSXMAG00000015531	patz1	100	89.297	ENSAPEG00000013354	patz1	100	89.297	Amphiprion_percula
ENSXMAG00000015531	patz1	100	86.263	ENSATEG00000011260	patz1	100	88.235	Anabas_testudineus
ENSXMAG00000015531	patz1	88	54.032	ENSAPLG00000003934	PATZ1	99	54.516	Anas_platyrhynchos
ENSXMAG00000015531	patz1	100	58.003	ENSANAG00000029603	PATZ1	100	57.856	Aotus_nancymaae
ENSXMAG00000015531	patz1	98	87.755	ENSAMXG00000002273	patz1	100	64.286	Astyanax_mexicanus
ENSXMAG00000015531	patz1	100	58.003	ENSBTAG00000005478	PATZ1	100	57.856	Bos_taurus
ENSXMAG00000015531	patz1	100	58.003	ENSCJAG00000010978	PATZ1	100	57.856	Callithrix_jacchus
ENSXMAG00000015531	patz1	100	58.003	ENSCAFG00000013087	PATZ1	99	57.856	Canis_familiaris
ENSXMAG00000015531	patz1	100	58.003	ENSCHIG00000020203	PATZ1	100	57.856	Capra_hircus
ENSXMAG00000015531	patz1	100	58.150	ENSTSYG00000033183	PATZ1	100	58.003	Carlito_syrichta
ENSXMAG00000015531	patz1	100	58.003	ENSCCAG00000028772	PATZ1	100	57.856	Cebus_capucinus
ENSXMAG00000015531	patz1	100	58.003	ENSCATG00000006101	PATZ1	100	57.856	Cercocebus_atys
ENSXMAG00000015531	patz1	100	56.052	ENSCPBG00000011277	PATZ1	100	57.063	Chrysemys_picta_bellii
ENSXMAG00000015531	patz1	100	58.003	ENSCANG00000024972	PATZ1	100	57.856	Colobus_angolensis_palliatus
ENSXMAG00000015531	patz1	100	56.535	ENSCGRG00001004071	Patz1	100	57.122	Cricetulus_griseus_chok1gshd
ENSXMAG00000015531	patz1	93	56.672	ENSCGRG00000004814	Patz1	100	57.300	Cricetulus_griseus_crigri
ENSXMAG00000015531	patz1	100	75.074	ENSCSEG00000001385	patz1	100	74.780	Cynoglossus_semilaevis
ENSXMAG00000015531	patz1	100	91.244	ENSCVAG00000007684	patz1	100	91.398	Cyprinodon_variegatus
ENSXMAG00000015531	patz1	100	69.874	ENSDARG00000076584	patz1	100	66.311	Danio_rerio
ENSXMAG00000015531	patz1	92	53.385	ENSDNOG00000003183	PATZ1	100	53.231	Dasypus_novemcinctus
ENSXMAG00000015531	patz1	100	58.150	ENSDORG00000023834	Patz1	100	58.003	Dipodomys_ordii
ENSXMAG00000015531	patz1	100	58.003	ENSECAG00000025030	PATZ1	100	57.856	Equus_caballus
ENSXMAG00000015531	patz1	100	75.896	ENSELUG00000002333	patz1	100	75.595	Esox_lucius
ENSXMAG00000015531	patz1	100	58.003	ENSFCAG00000030253	PATZ1	100	57.856	Felis_catus
ENSXMAG00000015531	patz1	88	53.514	ENSFALG00000007450	PATZ1	100	53.994	Ficedula_albicollis
ENSXMAG00000015531	patz1	96	51.433	ENSFDAG00000005614	PATZ1	100	51.433	Fukomys_damarensis
ENSXMAG00000015531	patz1	100	91.244	ENSFHEG00000014755	patz1	100	91.244	Fundulus_heteroclitus
ENSXMAG00000015531	patz1	100	67.525	ENSGMOG00000001062	patz1	100	67.954	Gadus_morhua
ENSXMAG00000015531	patz1	100	53.488	ENSGALG00000006934	PATZ1	100	54.309	Gallus_gallus
ENSXMAG00000015531	patz1	100	98.767	ENSGAFG00000010053	patz1	100	98.767	Gambusia_affinis
ENSXMAG00000015531	patz1	87	56.240	ENSGAGG00000003214	PATZ1	100	56.739	Gopherus_agassizii
ENSXMAG00000015531	patz1	100	58.003	ENSGGOG00000017171	PATZ1	100	57.856	Gorilla_gorilla
ENSXMAG00000015531	patz1	100	78.811	ENSHCOG00000017644	patz1	99	78.788	Hippocampus_comes
ENSXMAG00000015531	patz1	100	68.145	ENSIPUG00000017653	patz1	99	68.145	Ictalurus_punctatus
ENSXMAG00000015531	patz1	100	57.856	ENSSTOG00000020707	PATZ1	100	57.709	Ictidomys_tridecemlineatus
ENSXMAG00000015531	patz1	100	57.060	ENSJJAG00000015259	Patz1	98	58.046	Jaculus_jaculus
ENSXMAG00000015531	patz1	100	79.228	ENSKMAG00000008157	patz1	100	88.073	Kryptolebias_marmoratus
ENSXMAG00000015531	patz1	100	55.634	ENSLAFG00000002317	PATZ1	100	55.493	Loxodonta_africana
ENSXMAG00000015531	patz1	100	58.003	ENSMFAG00000040968	PATZ1	100	57.856	Macaca_fascicularis
ENSXMAG00000015531	patz1	100	58.003	ENSMNEG00000037588	PATZ1	100	57.856	Macaca_nemestrina
ENSXMAG00000015531	patz1	100	58.003	ENSMLEG00000030938	PATZ1	100	57.856	Mandrillus_leucophaeus
ENSXMAG00000015531	patz1	100	86.697	ENSMAMG00000023652	patz1	100	86.697	Mastacembelus_armatus
ENSXMAG00000015531	patz1	88	50.886	ENSMGAG00000008439	PATZ1	100	51.369	Meleagris_gallopavo
ENSXMAG00000015531	patz1	100	58.003	ENSMAUG00000004129	Patz1	100	58.590	Mesocricetus_auratus
ENSXMAG00000015531	patz1	100	58.003	ENSMICG00000005430	PATZ1	100	57.856	Microcebus_murinus
ENSXMAG00000015531	patz1	100	58.003	ENSMOCG00000014488	Patz1	100	58.003	Microtus_ochrogaster
ENSXMAG00000015531	patz1	100	83.019	ENSMMOG00000021679	patz1	100	74.384	Mola_mola
ENSXMAG00000015531	patz1	100	85.168	ENSMALG00000021172	patz1	100	85.168	Monopterus_albus
ENSXMAG00000015531	patz1	100	58.150	MGP_CAROLIEiJ_G0016007	Patz1	100	58.150	Mus_caroli
ENSXMAG00000015531	patz1	100	58.150	ENSMUSG00000020453	Patz1	100	58.150	Mus_musculus
ENSXMAG00000015531	patz1	100	58.150	MGP_PahariEiJ_G0016884	Patz1	100	58.150	Mus_pahari
ENSXMAG00000015531	patz1	100	58.150	MGP_SPRETEiJ_G0016846	Patz1	100	58.150	Mus_spretus
ENSXMAG00000015531	patz1	100	58.003	ENSMLUG00000009942	PATZ1	100	57.856	Myotis_lucifugus
ENSXMAG00000015531	patz1	100	57.856	ENSNGAG00000010268	Patz1	100	57.856	Nannospalax_galili
ENSXMAG00000015531	patz1	100	83.030	ENSNBRG00000016032	patz1	100	83.030	Neolamprologus_brichardi
ENSXMAG00000015531	patz1	74	51.758	ENSMEUG00000016293	PATZ1	100	52.834	Notamacropus_eugenii
ENSXMAG00000015531	patz1	100	57.918	ENSODEG00000003589	PATZ1	100	57.771	Octodon_degus
ENSXMAG00000015531	patz1	100	88.397	ENSONIG00000004248	patz1	100	88.397	Oreochromis_niloticus
ENSXMAG00000015531	patz1	100	60.187	ENSOANG00000014654	PATZ1	100	55.556	Ornithorhynchus_anatinus
ENSXMAG00000015531	patz1	100	84.969	ENSORLG00020010937	patz1	100	84.202	Oryzias_latipes_hni
ENSXMAG00000015531	patz1	100	85.407	ENSORLG00015007396	patz1	100	84.639	Oryzias_latipes_hsok
ENSXMAG00000015531	patz1	100	86.287	ENSOMEG00000006636	patz1	100	85.362	Oryzias_melastigma
ENSXMAG00000015531	patz1	100	54.633	ENSOGAG00000027905	PATZ1	100	54.495	Otolemur_garnettii
ENSXMAG00000015531	patz1	100	58.003	ENSPPAG00000033227	PATZ1	100	57.856	Pan_paniscus
ENSXMAG00000015531	patz1	100	58.003	ENSPPRG00000001573	PATZ1	100	57.856	Panthera_pardus
ENSXMAG00000015531	patz1	88	54.093	ENSPTIG00000007937	PATZ1	91	53.907	Panthera_tigris_altaica
ENSXMAG00000015531	patz1	100	58.003	ENSPTRG00000014268	PATZ1	100	57.856	Pan_troglodytes
ENSXMAG00000015531	patz1	100	58.003	ENSPANG00000006821	PATZ1	98	57.856	Papio_anubis
ENSXMAG00000015531	patz1	100	70.817	ENSPKIG00000019584	patz1	100	70.623	Paramormyrops_kingsleyae
ENSXMAG00000015531	patz1	73	57.256	ENSPSIG00000016553	-	92	56.974	Pelodiscus_sinensis
ENSXMAG00000015531	patz1	70	73.469	ENSPSIG00000011562	-	100	62.402	Pelodiscus_sinensis
ENSXMAG00000015531	patz1	100	75.294	ENSPMGG00000010196	patz1	100	74.487	Periophthalmus_magnuspinnatus
ENSXMAG00000015531	patz1	100	58.150	ENSPEMG00000005321	Patz1	100	58.003	Peromyscus_maniculatus_bairdii
ENSXMAG00000015531	patz1	100	98.615	ENSPLAG00000010425	patz1	100	98.615	Poecilia_latipinna
ENSXMAG00000015531	patz1	100	98.767	ENSPMEG00000000255	patz1	100	98.767	Poecilia_mexicana
ENSXMAG00000015531	patz1	100	92.587	ENSPREG00000002440	patz1	100	92.587	Poecilia_reticulata
ENSXMAG00000015531	patz1	100	54.495	ENSPPYG00000011732	PATZ1	100	54.357	Pongo_abelii
ENSXMAG00000015531	patz1	100	58.003	ENSPCOG00000019729	PATZ1	100	57.856	Propithecus_coquereli
ENSXMAG00000015531	patz1	100	54.495	ENSPVAG00000001749	PATZ1	100	54.357	Pteropus_vampyrus
ENSXMAG00000015531	patz1	100	88.379	ENSPNYG00000013542	patz1	100	88.379	Pundamilia_nyererei
ENSXMAG00000015531	patz1	88	58.718	ENSPNAG00000017222	patz1	100	59.177	Pygocentrus_nattereri
ENSXMAG00000015531	patz1	100	58.003	ENSRBIG00000044231	PATZ1	100	57.856	Rhinopithecus_bieti
ENSXMAG00000015531	patz1	100	58.003	ENSRROG00000037155	PATZ1	100	57.856	Rhinopithecus_roxellana
ENSXMAG00000015531	patz1	100	58.003	ENSSBOG00000003894	PATZ1	100	57.856	Saimiri_boliviensis_boliviensis
ENSXMAG00000015531	patz1	93	90.580	ENSSFOG00015013244	patz1	78	96.795	Scleropages_formosus
ENSXMAG00000015531	patz1	99	55.556	ENSSPUG00000015298	PATZ1	97	56.391	Sphenodon_punctatus
ENSXMAG00000015531	patz1	87	57.986	ENSSSCG00000010027	PATZ1	100	57.812	Sus_scrofa
ENSXMAG00000015531	patz1	100	78.984	ENSTRUG00000015366	patz1	100	78.561	Takifugu_rubripes
ENSXMAG00000015531	patz1	100	54.357	ENSTTRG00000010279	PATZ1	100	54.219	Tursiops_truncatus
ENSXMAG00000015531	patz1	100	58.003	ENSUAMG00000015014	PATZ1	100	57.856	Ursus_americanus
ENSXMAG00000015531	patz1	100	53.429	ENSXETG00000004190	patz1	100	54.155	Xenopus_tropicalis