EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXMAG00000015611 (Gene tree)
Gene ID: 102218640
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Xiphophorus_maculatus
Status: putative
Strand: Plus strand
Length: 41753 bases
Position: chr12:3730758-3772510
Accession: 102218640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXMAP00000023730	ResIII	PF04851.15	2.8e-07	1	1
ENSXMAP00000015657	ResIII	PF04851.15	3e-07	1	1
ENSXMAP00000038773	ResIII	PF04851.15	3e-07	1	1
ENSXMAP00000023730	BRK	PF07533.16	2.1e-17	1	1
ENSXMAP00000038773	BRK	PF07533.16	2.2e-17	1	1
ENSXMAP00000015657	BRK	PF07533.16	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXMAT00000015680	SMARCA2-203	4755	-	ENSXMAP00000015657	1584 (aa)	-	M4AMG3
ENSXMAT00000037271	SMARCA2-202	6940	-	ENSXMAP00000023730	1526 (aa)	-	-
ENSXMAT00000035184	SMARCA2-201	6533	XM_023343566	ENSXMAP00000038773	1605 (aa)	XP_023199334	UPI000C6C8BAF

Gene Model

Click here to download ENSXMAG00000015611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXMAG00000015611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXMAG00000015611	SMARCA2	95	78.631	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSXMAG00000015611	SMARCA2	100	91.226	ENSAPOG00000002641	SMARCA2	100	90.734	Acanthochromis_polyacanthus
ENSXMAG00000015611	SMARCA2	90	77.684	ENSAMEG00000012325	SMARCA2	99	85.223	Ailuropoda_melanoleuca
ENSXMAG00000015611	SMARCA2	100	87.909	ENSACIG00000015607	SMARCA2	100	88.002	Amphilophus_citrinellus
ENSXMAG00000015611	SMARCA2	100	91.418	ENSAOCG00000009647	-	100	91.107	Amphiprion_ocellaris
ENSXMAG00000015611	SMARCA2	100	91.350	ENSAPEG00000007646	SMARCA2	100	91.045	Amphiprion_percula
ENSXMAG00000015611	SMARCA2	99	91.425	ENSATEG00000006916	SMARCA2	98	90.984	Anabas_testudineus
ENSXMAG00000015611	SMARCA2	89	78.870	ENSAPLG00000013873	SMARCA2	74	84.996	Anas_platyrhynchos
ENSXMAG00000015611	SMARCA2	99	79.064	ENSACAG00000002423	SMARCA2	100	77.936	Anolis_carolinensis
ENSXMAG00000015611	SMARCA2	99	78.377	ENSANAG00000026498	SMARCA2	100	79.541	Aotus_nancymaae
ENSXMAG00000015611	SMARCA2	97	88.553	ENSACLG00000004248	SMARCA2	100	88.619	Astatotilapia_calliptera
ENSXMAG00000015611	SMARCA2	99	83.780	ENSAMXG00000012404	smarca2	99	83.416	Astyanax_mexicanus
ENSXMAG00000015611	SMARCA2	99	79.221	ENSBTAG00000007494	SMARCA2	100	78.814	Bos_taurus
ENSXMAG00000015611	SMARCA2	99	79.156	ENSCJAG00000010710	SMARCA2	99	80.236	Callithrix_jacchus
ENSXMAG00000015611	SMARCA2	95	78.604	ENSCAFG00000002013	SMARCA2	100	79.293	Canis_familiaris
ENSXMAG00000015611	SMARCA2	76	86.352	ENSCAFG00020026802	SMARCA2	94	86.180	Canis_lupus_dingo
ENSXMAG00000015611	SMARCA2	99	79.416	ENSCHIG00000025863	SMARCA2	100	78.814	Capra_hircus
ENSXMAG00000015611	SMARCA2	99	77.270	ENSTSYG00000003858	SMARCA2	99	80.943	Carlito_syrichta
ENSXMAG00000015611	SMARCA2	96	76.282	ENSCAPG00000002890	SMARCA2	99	78.035	Cavia_aperea
ENSXMAG00000015611	SMARCA2	97	78.964	ENSCPOG00000005475	SMARCA2	100	79.120	Cavia_porcellus
ENSXMAG00000015611	SMARCA2	99	78.312	ENSCCAG00000030636	SMARCA2	100	79.727	Cebus_capucinus
ENSXMAG00000015611	SMARCA2	99	79.583	ENSCATG00000031470	SMARCA2	100	79.381	Cercocebus_atys
ENSXMAG00000015611	SMARCA2	86	83.333	ENSCLAG00000014484	SMARCA2	100	79.603	Chinchilla_lanigera
ENSXMAG00000015611	SMARCA2	90	80.605	ENSCSAG00000008650	SMARCA2	99	80.943	Chlorocebus_sabaeus
ENSXMAG00000015611	SMARCA2	83	81.969	ENSCHOG00000004316	SMARCA2	86	81.969	Choloepus_hoffmanni
ENSXMAG00000015611	SMARCA2	99	78.903	ENSCPBG00000025463	SMARCA2	100	83.445	Chrysemys_picta_bellii
ENSXMAG00000015611	SMARCA2	95	79.275	ENSCANG00000039597	SMARCA2	100	79.789	Colobus_angolensis_palliatus
ENSXMAG00000015611	SMARCA2	95	74.431	ENSCGRG00001002323	Smarca2	100	73.717	Cricetulus_griseus_chok1gshd
ENSXMAG00000015611	SMARCA2	99	84.184	ENSCSEG00000019311	SMARCA2	99	84.734	Cynoglossus_semilaevis
ENSXMAG00000015611	SMARCA2	83	91.396	ENSCVAG00000016571	SMARCA2	98	91.245	Cyprinodon_variegatus
ENSXMAG00000015611	SMARCA2	100	82.571	ENSDARG00000008904	smarca2	100	82.088	Danio_rerio
ENSXMAG00000015611	SMARCA2	99	79.752	ENSDNOG00000006402	SMARCA2	100	79.678	Dasypus_novemcinctus
ENSXMAG00000015611	SMARCA2	97	78.662	ENSDORG00000014832	Smarca2	100	79.244	Dipodomys_ordii
ENSXMAG00000015611	SMARCA2	83	58.030	FBgn0000212	brm	99	53.898	Drosophila_melanogaster
ENSXMAG00000015611	SMARCA2	95	68.583	ENSEBUG00000011442	-	97	67.710	Eptatretus_burgeri
ENSXMAG00000015611	SMARCA2	86	59.236	ENSEBUG00000002449	-	95	61.325	Eptatretus_burgeri
ENSXMAG00000015611	SMARCA2	98	78.332	ENSEASG00005010312	SMARCA2	100	79.045	Equus_asinus_asinus
ENSXMAG00000015611	SMARCA2	62	94.118	ENSEEUG00000015540	-	69	78.378	Erinaceus_europaeus
ENSXMAG00000015611	SMARCA2	95	83.037	ENSELUG00000010318	smarca2	99	80.119	Esox_lucius
ENSXMAG00000015611	SMARCA2	95	78.502	ENSFCAG00000001568	SMARCA2	100	79.107	Felis_catus
ENSXMAG00000015611	SMARCA2	99	80.208	ENSFALG00000010416	SMARCA2	100	80.892	Ficedula_albicollis
ENSXMAG00000015611	SMARCA2	96	78.351	ENSFDAG00000010502	SMARCA2	100	78.760	Fukomys_damarensis
ENSXMAG00000015611	SMARCA2	100	95.389	ENSFHEG00000021250	SMARCA2	100	95.202	Fundulus_heteroclitus
ENSXMAG00000015611	SMARCA2	99	80.938	ENSGMOG00000014229	SMARCA2	99	80.375	Gadus_morhua
ENSXMAG00000015611	SMARCA2	99	80.208	ENSGALG00000010164	SMARCA2	100	79.555	Gallus_gallus
ENSXMAG00000015611	SMARCA2	98	89.332	ENSGAFG00000001164	SMARCA2	99	89.332	Gambusia_affinis
ENSXMAG00000015611	SMARCA2	99	86.537	ENSGACG00000014488	SMARCA2	99	86.036	Gasterosteus_aculeatus
ENSXMAG00000015611	SMARCA2	99	78.774	ENSGAGG00000024412	SMARCA2	100	79.048	Gopherus_agassizii
ENSXMAG00000015611	SMARCA2	89	85.889	ENSGGOG00000000513	SMARCA2	100	80.263	Gorilla_gorilla
ENSXMAG00000015611	SMARCA2	100	90.423	ENSHBUG00000006691	SMARCA2	100	90.491	Haplochromis_burtoni
ENSXMAG00000015611	SMARCA2	96	78.686	ENSHGLG00000005215	SMARCA2	98	80.000	Heterocephalus_glaber_female
ENSXMAG00000015611	SMARCA2	99	79.360	ENSHGLG00100010496	SMARCA2	100	79.107	Heterocephalus_glaber_male
ENSXMAG00000015611	SMARCA2	84	85.701	ENSHCOG00000015348	-	97	85.339	Hippocampus_comes
ENSXMAG00000015611	SMARCA2	99	82.782	ENSIPUG00000011060	smarca2	98	82.188	Ictalurus_punctatus
ENSXMAG00000015611	SMARCA2	96	78.964	ENSSTOG00000006812	SMARCA2	100	79.727	Ictidomys_tridecemlineatus
ENSXMAG00000015611	SMARCA2	98	79.061	ENSJJAG00000010867	Smarca2	99	79.313	Jaculus_jaculus
ENSXMAG00000015611	SMARCA2	100	92.853	ENSKMAG00000015844	-	100	92.666	Kryptolebias_marmoratus
ENSXMAG00000015611	SMARCA2	50	66.667	ENSLACG00000000270	SMARCA2	99	67.290	Latimeria_chalumnae
ENSXMAG00000015611	SMARCA2	99	81.959	ENSLOCG00000011499	smarca2	99	81.316	Lepisosteus_oculatus
ENSXMAG00000015611	SMARCA2	99	79.830	ENSLAFG00000014061	SMARCA2	100	79.492	Loxodonta_africana
ENSXMAG00000015611	SMARCA2	99	78.645	ENSMFAG00000003814	SMARCA2	99	79.119	Macaca_fascicularis
ENSXMAG00000015611	SMARCA2	96	78.516	ENSMMUG00000015279	SMARCA2	100	79.665	Macaca_mulatta
ENSXMAG00000015611	SMARCA2	99	79.391	ENSMNEG00000041069	SMARCA2	100	79.455	Macaca_nemestrina
ENSXMAG00000015611	SMARCA2	92	85.703	ENSMLEG00000027418	SMARCA2	95	87.854	Mandrillus_leucophaeus
ENSXMAG00000015611	SMARCA2	100	91.925	ENSMAMG00000003056	SMARCA2	100	91.677	Mastacembelus_armatus
ENSXMAG00000015611	SMARCA2	100	90.423	ENSMZEG00005020709	SMARCA2	100	90.491	Maylandia_zebra
ENSXMAG00000015611	SMARCA2	75	69.057	ENSMGAG00000005160	-	100	68.260	Meleagris_gallopavo
ENSXMAG00000015611	SMARCA2	99	75.665	ENSMICG00000005162	SMARCA2	100	79.479	Microcebus_murinus
ENSXMAG00000015611	SMARCA2	99	80.561	ENSMOCG00000001611	Smarca2	100	79.009	Microtus_ochrogaster
ENSXMAG00000015611	SMARCA2	99	84.931	ENSMMOG00000014196	SMARCA2	99	85.678	Mola_mola
ENSXMAG00000015611	SMARCA2	99	80.091	ENSMODG00000003578	SMARCA2	100	79.666	Monodelphis_domestica
ENSXMAG00000015611	SMARCA2	99	90.741	ENSMALG00000009611	SMARCA2	99	90.421	Monopterus_albus
ENSXMAG00000015611	SMARCA2	96	79.987	MGP_CAROLIEiJ_G0022841	Smarca2	99	79.812	Mus_caroli
ENSXMAG00000015611	SMARCA2	95	79.377	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSXMAG00000015611	SMARCA2	95	79.454	MGP_PahariEiJ_G0014334	Smarca2	99	78.974	Mus_pahari
ENSXMAG00000015611	SMARCA2	96	79.858	MGP_SPRETEiJ_G0023759	Smarca2	97	87.879	Mus_spretus
ENSXMAG00000015611	SMARCA2	82	84.867	ENSMPUG00000005171	SMARCA2	94	85.023	Mustela_putorius_furo
ENSXMAG00000015611	SMARCA2	99	76.314	ENSMLUG00000002342	SMARCA2	99	75.948	Myotis_lucifugus
ENSXMAG00000015611	SMARCA2	99	79.351	ENSNGAG00000000108	Smarca2	99	78.731	Nannospalax_galili
ENSXMAG00000015611	SMARCA2	99	76.324	ENSNBRG00000017998	SMARCA2	94	82.587	Neolamprologus_brichardi
ENSXMAG00000015611	SMARCA2	92	84.803	ENSNLEG00000008575	SMARCA2	99	77.503	Nomascus_leucogenys
ENSXMAG00000015611	SMARCA2	96	74.398	ENSMEUG00000009812	SMARCA2	100	71.953	Notamacropus_eugenii
ENSXMAG00000015611	SMARCA2	83	80.851	ENSOPRG00000013474	SMARCA2	100	75.232	Ochotona_princeps
ENSXMAG00000015611	SMARCA2	96	77.172	ENSODEG00000005452	SMARCA2	99	78.420	Octodon_degus
ENSXMAG00000015611	SMARCA2	99	90.733	ENSONIG00000014163	SMARCA2	99	90.545	Oreochromis_niloticus
ENSXMAG00000015611	SMARCA2	82	86.234	ENSOCUG00000006320	SMARCA2	100	78.387	Oryctolagus_cuniculus
ENSXMAG00000015611	SMARCA2	100	89.235	ENSORLG00000020820	SMARCA2	100	89.484	Oryzias_latipes
ENSXMAG00000015611	SMARCA2	100	89.297	ENSORLG00015006289	SMARCA2	100	89.608	Oryzias_latipes_hsok
ENSXMAG00000015611	SMARCA2	100	89.470	ENSOMEG00000009736	-	100	89.159	Oryzias_melastigma
ENSXMAG00000015611	SMARCA2	83	85.320	ENSOGAG00000017053	SMARCA2	99	79.010	Otolemur_garnettii
ENSXMAG00000015611	SMARCA2	95	77.821	ENSOARG00000013265	SMARCA2	99	79.180	Ovis_aries
ENSXMAG00000015611	SMARCA2	91	85.829	ENSPPAG00000038717	SMARCA2	99	85.400	Pan_paniscus
ENSXMAG00000015611	SMARCA2	95	78.530	ENSPPRG00000001879	SMARCA2	100	79.169	Panthera_pardus
ENSXMAG00000015611	SMARCA2	99	79.425	ENSPTRG00000051168	SMARCA2	100	79.270	Pan_troglodytes
ENSXMAG00000015611	SMARCA2	99	76.340	ENSPANG00000025121	SMARCA2	100	76.007	Papio_anubis
ENSXMAG00000015611	SMARCA2	100	82.371	ENSPKIG00000018469	-	100	81.813	Paramormyrops_kingsleyae
ENSXMAG00000015611	SMARCA2	99	78.364	ENSPSIG00000006284	SMARCA2	100	78.717	Pelodiscus_sinensis
ENSXMAG00000015611	SMARCA2	99	81.664	ENSPMGG00000013696	-	99	80.856	Periophthalmus_magnuspinnatus
ENSXMAG00000015611	SMARCA2	95	78.808	ENSPEMG00000019821	Smarca2	100	78.514	Peromyscus_maniculatus_bairdii
ENSXMAG00000015611	SMARCA2	95	69.905	ENSPMAG00000005337	-	97	68.434	Petromyzon_marinus
ENSXMAG00000015611	SMARCA2	99	79.702	ENSPCIG00000015658	SMARCA2	100	79.481	Phascolarctos_cinereus
ENSXMAG00000015611	SMARCA2	100	98.131	ENSPFOG00000001856	SMARCA2	100	98.131	Poecilia_formosa
ENSXMAG00000015611	SMARCA2	99	98.243	ENSPLAG00000017829	SMARCA2	97	98.243	Poecilia_latipinna
ENSXMAG00000015611	SMARCA2	100	98.131	ENSPMEG00000001815	-	99	98.131	Poecilia_mexicana
ENSXMAG00000015611	SMARCA2	100	98.193	ENSPREG00000013800	SMARCA2	100	98.193	Poecilia_reticulata
ENSXMAG00000015611	SMARCA2	99	79.429	ENSPPYG00000019258	SMARCA2	100	79.107	Pongo_abelii
ENSXMAG00000015611	SMARCA2	78	75.352	ENSPCAG00000016969	SMARCA2	78	75.352	Procavia_capensis
ENSXMAG00000015611	SMARCA2	95	77.202	ENSPCOG00000025709	SMARCA2	100	77.557	Propithecus_coquereli
ENSXMAG00000015611	SMARCA2	95	81.542	ENSPVAG00000000901	SMARCA2	94	80.452	Pteropus_vampyrus
ENSXMAG00000015611	SMARCA2	100	87.640	ENSPNYG00000004533	SMARCA2	100	87.640	Pundamilia_nyererei
ENSXMAG00000015611	SMARCA2	99	84.270	ENSPNAG00000014635	smarca2	98	84.467	Pygocentrus_nattereri
ENSXMAG00000015611	SMARCA2	95	78.225	ENSRNOG00000011931	Smarca2	100	77.900	Rattus_norvegicus
ENSXMAG00000015611	SMARCA2	95	79.033	ENSRBIG00000038618	SMARCA2	95	85.659	Rhinopithecus_bieti
ENSXMAG00000015611	SMARCA2	99	78.669	ENSRROG00000019271	SMARCA2	99	80.198	Rhinopithecus_roxellana
ENSXMAG00000015611	SMARCA2	93	84.832	ENSSBOG00000034827	SMARCA2	99	82.753	Saimiri_boliviensis_boliviensis
ENSXMAG00000015611	SMARCA2	99	80.143	ENSSHAG00000007884	SMARCA2	100	79.654	Sarcophilus_harrisii
ENSXMAG00000015611	SMARCA2	91	82.277	ENSSFOG00015014870	SMARCA2	97	82.744	Scleropages_formosus
ENSXMAG00000015611	SMARCA2	100	89.177	ENSSMAG00000013707	SMARCA2	100	89.610	Scophthalmus_maximus
ENSXMAG00000015611	SMARCA2	100	90.736	ENSSDUG00000008852	-	100	90.675	Seriola_dumerili
ENSXMAG00000015611	SMARCA2	99	87.799	ENSSLDG00000025449	SMARCA2	99	88.449	Seriola_lalandi_dorsalis
ENSXMAG00000015611	SMARCA2	93	73.006	ENSSARG00000007888	SMARCA2	94	75.287	Sorex_araneus
ENSXMAG00000015611	SMARCA2	99	76.034	ENSSPUG00000001629	SMARCA2	97	77.053	Sphenodon_punctatus
ENSXMAG00000015611	SMARCA2	100	91.537	ENSSPAG00000020091	-	100	91.169	Stegastes_partitus
ENSXMAG00000015611	SMARCA2	98	78.571	ENSSSCG00000005232	SMARCA2	100	79.146	Sus_scrofa
ENSXMAG00000015611	SMARCA2	99	79.753	ENSTGUG00000005460	SMARCA2	100	79.543	Taeniopygia_guttata
ENSXMAG00000015611	SMARCA2	100	88.067	ENSTRUG00000015619	SMARCA2	99	87.831	Takifugu_rubripes
ENSXMAG00000015611	SMARCA2	63	97.619	ENSTBEG00000008767	SMARCA2	70	97.619	Tupaia_belangeri
ENSXMAG00000015611	SMARCA2	95	80.068	ENSTTRG00000002033	SMARCA2	95	79.317	Tursiops_truncatus
ENSXMAG00000015611	SMARCA2	89	79.838	ENSUAMG00000024701	SMARCA2	99	78.611	Ursus_americanus
ENSXMAG00000015611	SMARCA2	87	79.074	ENSVPAG00000001204	SMARCA2	93	79.156	Vicugna_pacos
ENSXMAG00000015611	SMARCA2	76	86.364	ENSVVUG00000004598	SMARCA2	99	84.763	Vulpes_vulpes
ENSXMAG00000015611	SMARCA2	100	76.059	ENSXETG00000015299	smarca2	100	75.414	Xenopus_tropicalis
ENSXMAG00000015611	SMARCA2	88	97.713	ENSXCOG00000011073	SMARCA2	99	97.713	Xiphophorus_couchianus